| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 2,211,670 | C→A | 5.3% | intergenic (‑396/+150) | USA300HOU_2086 ← / ← USA300HOU_2087 | hypothetical protein/hypothetical membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 2,211,670 | 0 | C | A | 5.3% | 268.4 / 2.2 | 83 | intergenic (‑396/+150) | USA300HOU_2086/USA300HOU_2087 | hypothetical protein/hypothetical membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (31/47); new base A (3/2); total (34/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.31e-01 | |||||||||||
TATACTGCTACACTGATGAATCATTGTGTCAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGTTAAAATTATCTTCAACTTTTAGGGTGCACATTATTTGGA > CP000730/2211533‑2211809 | tataCTGCTACACTGATGAATCATTGTGTCAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACAtt < 1:390591/141‑1 (MQ=255) ataCTGCTACACTGATGAATCATTGTGTCAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACAttt < 2:435955/141‑1 (MQ=255) agaattcTACCCTGATGAATCATTGTGTCAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACAttt < 2:154176/135‑1 (MQ=255) tGCTACACTGATGAATCATTGTGTCAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGaaa > 2:340558/1‑141 (MQ=255) tGCTACACTGATGAATCATTGTGTCAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCAAATTTGaaa > 2:106393/1‑141 (MQ=255) gacacTGATGAATCATTGTGGCAAGAGGACATTGCGATGGATCATGAGAACTCTGTTATTAACCACTTTTTACAGTCTGAAAACTCTTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAa‑tca < 2:13599/140‑1 (MQ=255) acacTGATGAATCATTGTGTCAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAa‑tcat > 1:562330/1‑141 (MQ=255) cacTGATGAATCATTGTGTAAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAAGAGCAGTAGGATGACTTTCACCTTTGAAa‑tcatt > 2:434310/1‑140 (MQ=255) acTGATGAATCATTGTGTCAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCt > 1:753292/1‑141 (MQ=255) gatgaATCATTGTGTCAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTAc < 1:430444/141‑1 (MQ=255) taaaTCATTGTGTCAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTCCAAACTCATTAATATTACTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTActg < 2:705470/139‑1 (MQ=255) aaTCATTGTGTCAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTactact > 2:24098/1‑141 (MQ=255) agtgtgTCAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGttt < 1:423786/139‑1 (MQ=255) aTTGTGTCAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCGAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGttt > 1:433943/1‑141 (MQ=255) ttGTGTCAAGATGATATTGCGATGAAGAATGACACCTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTc < 2:638860/141‑1 (MQ=255) cAAGATGACATTGCGATGAAGAATGACAACTCTNTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTa < 1:131599/141‑1 (MQ=255) cAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATAGTATTTCAAATAAAGACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGGTTCTATTTa > 2:222355/1‑141 (MQ=255) cAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACGCAAAACGCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCGGTTTCTAtttt > 1:146997/1‑140 (MQ=255) aaGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCAACTTCTCGCTGTTTATATTTAt > 2:339466/1‑141 (MQ=255) aaGATGACATTGCGATGAAAAATGACAATTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTAt < 2:87813/141‑1 (MQ=255) agaagaCATCGCGATGAAGAATGACAACTCTGTTATTAACCCCTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATc < 2:738851/141‑1 (MQ=255) aGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATc < 2:516536/141‑1 (MQ=255) aGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATc < 2:774186/141‑1 (MQ=255) aGATGACATTGCGATGAAGAATGACAACTCTGTAATTAACCACTTTTTACATACTGAAAACTCGTTAGTATTATTTCAAATACAGACAGCAGTAGGAAGACATTCACCTTTGAAA‑TCATCTTACGGCTGCTTCTTGTTATc > 1:1052/1‑141 (MQ=255) aCATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGAAGTAGGATGACTTTCACATTTTAAA‑TAATATTACTGCTATTTCTATTTCTCACtta > 2:660796/1‑141 (MQ=255) cATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACatat > 1:613338/1‑141 (MQ=255) ttGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTg < 2:557216/141‑1 (MQ=255) atGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTg < 2:612192/140‑1 (MQ=255) tGCTATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGt < 1:516841/141‑1 (MQ=255) tGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGt < 1:144985/141‑1 (MQ=255) cGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAGAAACAGCAGTAAGATGA‑TTTCAAATGTGAAAGTCATCCTACTGCTGTTTTTAtttgaaataatattaac < 1:647501/141‑15 (MQ=14) gaagaaTGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAAtg < 1:318465/141‑1 (MQ=255) tGACACCTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGacac < 2:728445/141‑1 (MQ=255) tGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGacac < 1:168166/141‑1 (MQ=255) taCAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACt < 1:227446/140‑1 (MQ=255) aCTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGt < 1:722829/141‑1 (MQ=255) tctGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCCAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTGTATTTTGCACATATTGTATAATGTGACACTAAGttt > 1:369704/1‑141 (MQ=255) ttGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTc < 2:653000/140‑1 (MQ=255) ctGTTATTAACCATTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTc < 1:207891/141‑1 (MQ=255) tGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTATGTGTCg < 2:91388/141‑1 (MQ=255) tGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCg < 1:522247/141‑1 (MQ=255) tGTTATTAACCACTTTTTACATACTGAAAACCCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCg < 2:120308/141‑1 (MQ=255) gTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCCGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGc > 2:396890/1‑141 (MQ=255) attaACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTAt > 2:770971/1‑141 (MQ=255) ttaACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCttca < 1:440446/141‑4 (MQ=255) ccACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAg > 2:599334/1‑141 (MQ=255) cACCTTCTACATACTGAAGACTCGTTAATATTAGTTCAGATGAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTAGTGCTGTCCCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGc < 2:776368/141‑1 (MQ=255) aCTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCg < 2:209509/141‑1 (MQ=255) tttttACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGaa > 1:11718/1‑141 (MQ=255) ttttACATACTGAAAACTCGTTAATATTAGTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTGTGATGTGACACTAAGTTTCGCTATTGAAGCGaca > 2:400278/1‑139 (MQ=255) ttACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGaaaaa < 1:4874/141‑1 (MQ=255) aCATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAaata < 2:238523/141‑1 (MQ=255) cctACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAaataa < 2:606118/139‑1 (MQ=255) aTACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAaataat > 2:499365/1‑141 (MQ=255) aCTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAAtgt < 1:106393/141‑1 (MQ=255) aCTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTAGCTATTGAAGCGAAAAATAAtgt > 1:54226/1‑141 (MQ=255) taaaaCTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGACGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTgcg < 2:654277/140‑1 (MQ=255) aaaaCTCGTTAAGATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACACTTTAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTACAATGTATAACTAAGTTTCGCTATTGAAGCGAAAGAAAATGTccgc > 2:320002/1‑141 (MQ=255) aaaCTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGcc > 1:300541/1‑141 (MQ=255) aaCTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAACCGAAAACTAATgcccgccc > 2:228327/1‑141 (MQ=255) ccccttAATATTATTTCAACTAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTACTAATCCCACTTTGTATAATGTGACCCTAAGGTTCGCTATTGAAGCGAAAAATAATGTGCGCCCta < 1:182937/137‑1 (MQ=255) cGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATATTGTGCGCCCtata > 1:232531/1‑141 (MQ=255) cGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCtata < 2:221512/141‑1 (MQ=255) cGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCtata > 2:569410/1‑141 (MQ=255) tAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAg > 2:270334/1‑141 (MQ=255) aaTATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGt < 2:102602/141‑1 (MQ=255) atatTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACTCTAAGTTGCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGtt < 1:340558/141‑1 (MQ=255) gaaaCAGCAGTAAGATGA‑TTTCAAATGTGAAAGTCATCCTACTGCTGTTTTTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGTTAAAATTGTCTTCAAc > 1:11714/2‑141 (MQ=21) aaaaCAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGTTACAATTATCTTCAAc > 2:644092/1‑141 (MQ=255) aaaCAGCAGTATGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGTTAAAATTATCTTCAACt < 1:382558/141‑1 (MQ=255) aaaCAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTGTTGAAGCGAAAAATAATTTGCGCCCTATAAGGGTAAAATTGTATTCAACt > 1:77249/1‑141 (MQ=255) aaaCAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGTTAAAATTATCTTCAACt > 1:481288/1‑141 (MQ=255) cagcggTAGGTTGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACATTAAGTTGCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGTTAAAATTATCTTCAACtttt < 2:156833/141‑1 (MQ=255) agcagTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGTTAAAATTATCTTCAACTTTTa < 2:611126/141‑1 (MQ=255) gcagTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGTTAAAATTATCTTCAACTTTTAg < 1:632512/141‑1 (MQ=255) agTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGTTAAAATTATCTTCAACTTTTAggg < 1:120913/141‑1 (MQ=255) gTAGGATGCTTTTCAACTTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGTTAAAATTATCTTCAACTTTTAGGGt < 1:96901/141‑1 (MQ=255) gTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGTTAAAATTATCTTCAACTTTTAgggg > 2:542297/1‑140 (MQ=255) gTAAGATGA‑TTTCAAATGTGAAAGTCATCCTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGATAAATAATGTGCGCCCTATAAAGTTTAAGTTATCTTCAACTTTTATGGt > 2:400194/1‑141 (MQ=25) gATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCTCTATTGATTCGAAAAATAATGTGCGCCCTATAAAGTTAAAATTATCTTCAACTTTTAGGGTGcac < 1:529416/141‑1 (MQ=255) gATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGTTAAAATTATCTTCAACTTTTAGGGTGcac < 2:42437/141‑1 (MQ=255) tttCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGTTAAAATTATCTTCAACTTTTCGGGTGCTCattatt < 2:771137/141‑1 (MQ=255) tCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATCTTGTATCATCTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCGATAAAGTTATAATTGACTTCAACTGTTAGGGTGCACATTATTTg > 1:258904/1‑141 (MQ=255) acaTTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACAGCTTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGTTAAAATTATCTTCAACTTTTAGGGTGCACATTATTTGGa < 2:23920/141‑1 (MQ=255) | TATACTGCTACACTGATGAATCATTGTGTCAAGATGACATTGCGATGAAGAATGACAACTCTGTTATTAACCACTTTTTACATACTGAAAACTCGTTAATATTATTTCAAATAAAAACAGCAGTAGGATGACTTTCACATTTGAAA‑TCATCTTACTGCTGTTTCTATTTATCACATATTGTATAATGTGACACTAAGTTTCGCTATTGAAGCGAAAAATAATGTGCGCCCTATAAAGTTAAAATTATCTTCAACTTTTAGGGTGCACATTATTTGGA > CP000730/2211533‑2211809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |