| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 873,442 | A→G | 5.1% | E116G (GAA→GGA) | clfA → | fibrinogen‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 873,442 | 0 | A | G | 5.1% | 222.6 / 3.0 | 78 | E116G (GAA→GGA) | clfA | fibrinogen‑binding protein |
| Reads supporting (aligned to +/- strand): ref base A (33/41); new base G (2/2); total (35/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.43e-01 | |||||||||||
CGACACAAACGTGAGTGATACTAAAACATCGTCAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCAC > CP000730/873302‑873582 | cgacACAAACGTGAGTGATACTAAAACATCGTCAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGa < 1:53645/141‑1 (MQ=255) gacACAAACGTGAGTGATACTAAAACATCGTCAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGaa < 1:252237/141‑1 (MQ=255) acaAACGTGAGTGATACTAAAACATCGTCAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑GTCATCATCAACAACTGCAACTACGGAAGAAGCGCCGGTAACTGGTGAAGct > 1:599456/1‑141 (MQ=255) caAACGTGAGTGATACTAAAACATCGTCAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGcta > 2:387551/1‑141 (MQ=255) aaaCGTGAGTGATACTAAAACATCGTCAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACCCC‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGctac < 2:86926/141‑1 (MQ=255) aaaCGTGAGGTATACGAAAACATCGCCAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGctac < 2:346563/141‑1 (MQ=255) aCGTGAGTGATACTAAAACATCGTCAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGctacta < 1:523403/141‑1 (MQ=255) agtgaTACTAAAACATCGTCAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAAATACGGTAGCAACGCCGGGAAGTAGTGAAGCTGATACTACg > 1:759565/1‑141 (MQ=255) gtgaTACTAAAACATCGTCAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGa < 1:358313/141‑1 (MQ=255) aTACTAACACATCACCAAACACCAATAATGGCGAAACGAGTGTTGCGCAAAATCCACCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACaa < 1:598/141‑1 (MQ=255) aCTAAAACATCGTCAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACg < 1:214900/141‑1 (MQ=255) aCTAAAACATCGGCAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAAGGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACg < 2:330973/141‑1 (MQ=255) cATCGTAAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACATGAAACGACACA‑ATCATCATCAACAAATGCAACGACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAg > 2:486986/1‑141 (MQ=255) ggcAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTaa < 1:348072/139‑1 (MQ=255) gTCAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTaa > 1:769229/1‑141 (MQ=255) cAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATa > 1:239018/1‑141 (MQ=255) aaccTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACCGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATacac < 2:477292/138‑1 (MQ=255) aataatGGCGAAACGAGTGAGACGCAAAATCCAGCCAGAAAGGAAGTTCCCCA‑TCCGTCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGca < 1:363789/141‑1 (MQ=255) taatGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGcaac < 1:63911/141‑1 (MQ=255) taatGGCGAAACGAGTGTGGCGCAAAATCCACCACAACAGTAAACGACACA‑ATCATCAACCACAACTCCAACTACGGAAGAAACACCGGAAAATGGTAAAGCTAATACTACGACAACCAATCAAGCAAATGCACCGGcagc > 2:229654/1‑139 (MQ=255) atGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGcaacaa < 2:114624/141‑1 (MQ=255) atGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAAACAAGCTAATACACAGGaaaaaa > 2:462037/1‑141 (MQ=255) acggCGAAACCAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACAAA‑ATCATCATCAACAAATGCACCTACGAAAGAAACGCCGGTAACTCGTGAAGCTACTACTACGATAACGAATCAAGCTAATACACCGGcaacaa < 2:221377/139‑1 (MQ=255) tGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGCACCG‑CTCACAGCATCAGCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCaacaac < 1:250981/141‑1 (MQ=255) tGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGTATCAAGCTATTACACCGGCaacaac < 1:387418/141‑1 (MQ=255) ggCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACt < 1:387551/141‑1 (MQ=255) ggCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCAAATACACCGGCaacaacc > 1:135723/1‑140 (MQ=255) ggCGAAACGAGTGTGGCGCAAAACCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACCACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACt < 2:252635/141‑1 (MQ=255) aaCGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGGAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACtcaatc > 1:329505/1‑141 (MQ=255) aaCGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGGAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACtcaatc > 2:328643/1‑141 (MQ=255) aaCGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGATAACGAATCAAGCTAATACACCGGCAACAACtcaatc > 2:143928/1‑141 (MQ=255) aaCGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCACCAACtcaata > 2:641861/1‑140 (MQ=255) cGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACtcaatcaa > 1:260765/1‑141 (MQ=255) gAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATAAACCGGCAACAACTCAATCAAg > 2:158956/1‑141 (MQ=255) gtgtGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACCACTCAATCAAGCa > 1:42012/1‑141 (MQ=255) ggCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATAc < 1:51572/141‑1 (MQ=255) ggCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATAc < 1:124428/141‑1 (MQ=255) gcgcAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACa < 1:501090/141‑1 (MQ=255) gcgcAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGCAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACa < 2:746160/141‑1 (MQ=255) gcAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGGAACTACGGAAGAACCGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAGAAACTCAATCGAGCAGTACaaa > 1:217968/1‑141 (MQ=255) gcAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACaaa > 1:477180/1‑141 (MQ=255) cAAAATCCAGCACAACAGGAAAAGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAAGCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAAt < 2:340207/141‑1 (MQ=255) aaTCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCg < 1:12767/141‑1 (MQ=255) tCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCgga < 1:509569/141‑1 (MQ=255) ccAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCggag > 1:560569/1‑141 (MQ=255) aGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCggagga < 1:272629/141‑1 (MQ=255) acaGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAAtaggg > 2:222163/1‑137 (MQ=255) acaGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAAGGCGGAGGAATAAgg > 1:230481/1‑140 (MQ=255) caGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATACGGAGGAATAAGTg > 2:586735/1‑141 (MQ=255) gAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAAt < 1:143004/141‑1 (MQ=255) aaCGACACA‑AACAACAGCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCa < 2:169762/141‑1 (MQ=255) gACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAAc < 1:316845/141‑1 (MQ=255) gACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAAc < 1:443767/141‑1 (MQ=255) caca‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACaa < 2:560569/141‑1 (MQ=255) caca‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACaa > 1:271989/1‑141 (MQ=255) caca‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAACACAAATGCGGAGGAATTAGTGAGTCAAACaa > 1:86335/1‑141 (MQ=255) caca‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGGAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACaa > 2:386340/1‑141 (MQ=255) ccatcaACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAATCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTATTGAATCAAACAAGTAATGaa < 1:543522/140‑1 (MQ=255) aacaaATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACAAATCAAGCTAATACACCGACAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAAACAAACAAGTAATGAAACGaa > 2:83917/1‑140 (MQ=255) aacaaACGCAACTACGGAAGAAACGCAGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGAc < 1:319485/141‑1 (MQ=255) caaATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACtt < 1:536600/141‑1 (MQ=255) aaaTGCAACTACGGAAGAAACGCCGGTAACTGGTGGAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTc < 1:328643/141‑1 (MQ=255) aaaTGCAACTACGGAAGAAACGCCGGTAACTGGTGGAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTc < 2:329505/141‑1 (MQ=255) aaTGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATGCAACGGCAACAACACAAGCCATTAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCt < 1:180681/141‑1 (MQ=255) aTGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTa < 2:769229/141‑1 (MQ=255) tGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCCAGCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTaa < 1:488455/141‑1 (MQ=255) tGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTaa > 1:13388/1‑141 (MQ=255) cAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATg < 2:697331/141‑1 (MQ=255) cAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAAAGAAACGACTTCTAATg > 1:609829/1‑141 (MQ=255) aCTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGGATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGAAATTAGTGAAGCAAACAAGTAATGAACCGACTTCTAAtcaa > 1:285501/1‑138 (MQ=255) cTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATa < 1:683644/141‑1 (MQ=255) aagaaACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATa < 1:286037/141‑1 (MQ=255) agaaACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGTCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATCCTAATAc < 1:487804/141‑1 (MQ=255) aaaCGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATTATACTAATaacg > 2:361777/1‑138 (MQ=255) aaaCGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATCCTAGTAAAg > 2:76599/1‑141 (MQ=255) aCGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTa > 2:435426/1‑141 (MQ=255) cccGGTAACTGGTGAAGCTAATACTACGACAACGAATCAAGCTAATCCACTGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTatc < 2:505444/140‑1 (MQ=255) cGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTatcat > 1:666105/1‑141 (MQ=255) tAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTg > 2:328456/1‑141 (MQ=255) gTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAAtt > 2:206643/1‑141 (MQ=255) aaGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCAc < 2:477180/141‑1 (MQ=255) | CGACACAAACGTGAGTGATACTAAAACATCGTCAAACACTAATAATGGCGAAACGAGTGTGGCGCAAAATCCAGCACAACAGGAAACGACACA‑ATCATCATCAACAAATGCAACTACGGAAGAAACGCCGGTAACTGGTGAAGCTACTACTACGACAACGAATCAAGCTAATACACCGGCAACAACTCAATCAAGCAATACAAATGCGGAGGAATTAGTGAATCAAACAAGTAATGAAACGACTTCTAATGATACTAATACAGTATCATCTGTAAATTCAC > CP000730/873302‑873582 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |