Predicted mutation
evidence seq id position mutation annotation gene description
RA CP000730 2,279,705 G→A intergenic (+1373/+6659) mtlD → / ← glmM mannitol‑1‑phosphate 5‑dehydrogenase/phosphoglucosamine mutase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007302,279,7050GA97.1% 318.6 / NA 107intergenic (+1373/+6659)mtlD/glmMmannitol‑1‑phosphate 5‑dehydrogenase/phosphoglucosamine mutase
Reads supporting (aligned to +/- strand):  ref base G (0/1);  major base A (56/46);  minor base C (0/3);  total (57/50)
Fisher's exact test for biased strand distribution p-value = 9.83e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 107 total aligned reads displayed.

TTATCAGTTGTGCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTGCTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGCTGTTGCAT  >  CP000730/2279561‑2279846
                                                                                                                                                |                                                                                                                                               
ttATCAGTTGTGCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTGGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACtt                                                                                                                                              >  1:137556/1‑147 (MQ=255)
ttATCAGTTGTGCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACtt                                                                                                                                              >  1:347058/1‑147 (MQ=255)
ttATCAGTTGTGCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACtg                                                                                                                                              >  1:666118/1‑148 (MQ=255)
   tCAGTTGTGCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCTTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAACTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTCGCTGATGTTACtgttg                                                                                                                                           <  2:637524/148‑1 (MQ=255)
   tCAGTTGTGCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACtgttg                                                                                                                                           >  2:810497/1‑148 (MQ=255)
     aattGTGCCGTTCTTAGTTTATTCTAGTTCTGGTGTACTAGTTACATCGTTATGCATTGTCGGGCTGTTTGTTGGTGCATCTACACTAGAATTGTTATTCGCTTGAGGTTTATGATTTGCCTCATGTGTTGCTGATATTTCtgttggt                                                                                                                                         >  2:282650/3‑146 (MQ=255)
     aGTTGTGCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTgttgtt                                                                                                                                         >  1:910964/1‑148 (MQ=255)
     aGTTGTGCCGTTATTAGTTGAATCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTgttgtt                                                                                                                                         >  1:520689/1‑148 (MQ=255)
       ttGTGGCGTTATGAGTTGTTTCTGCTTCTGGTTTACTAGTTATTTCGTTGTTCTTTGTCGTACGGCTACCTTCTTCATCTACACTAGAATTGTTAGTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTc                                                                                                                                       <  2:64150/148‑1 (MQ=255)
                 attaGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGcc                                                                                                                             >  2:470187/1‑148 (MQ=255)
                    aGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTGTTAGCTTGCGGTTTATCATTTGCATCATCGGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGct                                                                                                                          >  1:906272/1‑147 (MQ=255)
                    aGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCGTTTGCATCATCAGTTGCTGATGTTACTGTTTTTTCACCTGTTGCCGCa                                                                                                                          >  1:228273/1‑148 (MQ=255)
                    aGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCTCCTGTTGCCGct                                                                                                                          >  2:929806/1‑147 (MQ=255)
                    aGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCa                                                                                                                          <  2:398560/148‑1 (MQ=255)
                    aGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCa                                                                                                                          >  1:784296/1‑148 (MQ=255)
                      tttatgctgcTTCTGGTTTACTAGTTACTTCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATc                                                                                                                        <  2:668072/139‑1 (MQ=255)
                      tttaTTCTACTTCTGTTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATc                                                                                                                        <  2:780187/145‑1 (MQ=255)
                      ttGGTTCTACTTCTGTTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATc                                                                                                                        <  2:17870/148‑1 (MQ=255)
                       tGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTTTTGCCGCATcc                                                                                                                       >  2:12532/1‑147 (MQ=255)
                       tGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATcc                                                                                                                       >  2:649141/1‑147 (MQ=255)
                         aTTATACTTCTGGTTTACTAGTTAGATCGTTATCCATTGTCTGACTGTTTGTTGATGCATCTACACTAGCATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACt                                                                                                                     <  1:341421/148‑1 (MQ=255)
                            cTACTTCTGGTTTACTCGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGTTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACtatt                                                                                                                  <  1:152307/148‑1 (MQ=255)
                                ttCTGGTTTACTAGTTACATTGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTAttt                                                                                                              <  1:867175/148‑1 (MQ=255)
                                 tCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTg                                                                                                             >  1:384157/1‑148 (MQ=255)
                                   tGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGgt                                                                                                           <  1:835382/148‑1 (MQ=255)
                                     gcttACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGCATTGTTATTAGCTTGCGGTTTCTCATTTGCATCATCAGTTGCGGATGTTACCGTTGTTTCACCTGTTGCCGCATCACTATCATCTGgt‑g‑t                                                                                                       >  2:477914/3‑148 (MQ=255)
                                       ttACTAGTTACATTGTTATCTATTTTTAGACTGTTTGTTGATGCATCTACACTAGAATTGATATTAGCTTGCGGTTTATCATTTGCATAATCAGTTGCTGATGTTACTGTTGTTTCACCTTTTGCCGCATCACTATTATTTGGt‑g‑ttg                                                                                                     <  1:70148/148‑1 (MQ=255)
                                       ttACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGt‑g‑ttg                                                                                                     <  1:594204/148‑1 (MQ=255)
                                        tACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGt‑g‑ttgt                                                                                                    <  1:712463/148‑1 (MQ=255)
                                        tACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGt‑g‑ttgt                                                                                                    <  1:944325/148‑1 (MQ=255)
                                        tACTAGTGACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATGAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTCCACCTGTTGCCGCATCACTATTATTTGGt‑g‑ttgt                                                                                                    <  1:944259/148‑1 (MQ=255)
                                           tAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCgg                                                                                                 >  2:331805/1‑148 (MQ=255)
                                           tAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGACGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCgg                                                                                                 >  1:879542/1‑148 (MQ=255)
                                            tgTTACAGCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGga                                                                                                <  1:108065/147‑1 (MQ=255)
                                             gTTACCTCGTTATCCATTGTCTGACTGTTTGTTGATCCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGgag                                                                                               <  2:958454/148‑1 (MQ=255)
                                               tACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCGCGATTATTTGGT‑G‑TTGTCGGAGaa                                                                                             >  1:788368/1‑148 (MQ=255)
                                               tACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGaa                                                                                             >  1:624860/1‑148 (MQ=255)
                                               tACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGaa                                                                                             >  2:491852/1‑148 (MQ=255)
                                               tACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑CTGTCGGAGaa                                                                                             >  1:125387/1‑148 (MQ=255)
                                                aCATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTGTTATTTGGT‑G‑TTGTCGGAGAAg                                                                                            >  2:541813/1‑148 (MQ=255)
                                                aCATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGTT‑G‑TTGTCGGAGAAg                                                                                            >  2:937887/1‑148 (MQ=255)
                                                  aTCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTCTTATTTGGT‑G‑TTTTCGGAGAAGCg                                                                                          >  1:372727/1‑148 (MQ=255)
                                                  aTCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCg                                                                                          >  1:549570/1‑148 (MQ=255)
                                                    cGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTc                                                                                        <  2:802228/148‑1 (MQ=255)
                                                    cGTTATCCATTGTCGGACGGGTGGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTc                                                                                        <  2:492277/148‑1 (MQ=255)
                                                     gTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGGGGCGttt                                                                                       >  2:377639/1‑146 (MQ=255)
                                                          tttttgttgGACTGTGTGTTCAGGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCttt                                                                                  <  2:747268/145‑1 (MQ=255)
                                                          cgaTTGTCGGACTGTTTGTTGATGCATCTACACTAGATTTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCCCTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCttt                                                                                  <  2:947655/146‑1 (MQ=255)
                                                          ccATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGGAGCGTCTGCttt                                                                                  >  2:400848/1‑148 (MQ=255)
                                                          ccATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCttt                                                                                  >  1:523099/1‑148 (MQ=255)
                                                           cATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTg                                                                                 <  1:869688/148‑1 (MQ=255)
                                                           cATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTg                                                                                 <  1:795815/148‑1 (MQ=255)
                                                              tttCGGACTGTTTGTTGATGCATCCACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCa                                                                              <  2:296453/146‑1 (MQ=255)
                                                                        tttgttGATTCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCACTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTCTCGGAGAAGCGTCTGCTTTGCCATTAGCTgtcg                                                                    <  2:552282/148‑1 (MQ=255)
                                                                             tgATGCATTTACACTAGCATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCa                                                               <  2:22053/148‑1 (MQ=255)
                                                                             tgATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCa                                                               <  1:797461/148‑1 (MQ=255)
                                                                             tgATGCATCCAAACCAGAATCGTTATTAGCTTGCCGTTTATCATTTGCATCATCAGTTGCCGATGTTACTGTTGTTTCCCCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCa                                                               <  1:52813/148‑1 (MQ=255)
                                                                                tGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGTATCATCAGTTGCTGATGTTACTGTTGTTTAACCTGTTGCCGCCTCTCCATTAGTGGGT‑G‑TTTTCGGGGAAGCGGCTGCTTTGCCATTAGCTTTCGTCTCAGAt                                                            >  2:333566/1‑148 (MQ=255)
                                                                                  cATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACCATTATTTGCT‑T‑TTTTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATAc                                                          <  2:164383/148‑1 (MQ=255)
                                                                                    tCTACACTAGAATTGTTATTAGCTTGCCGTTTATCATTTGCAACATTACAATGTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGt                                                        <  1:470187/148‑1 (MQ=255)
                                                                                     cTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATC‑CT‑TTATACGGTAGCCTTTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGtt                                                       >  1:433125/1‑148 (MQ=255)
                                                                                     cTACACTAGAATTGTTACTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAGGCGTCTGCTTTGCCCTTAGCTGTCGTCTCAGATACGtt                                                       >  2:433195/1‑148 (MQ=255)
                                                                                      caccccaGAATTGTTATCAGCTTGCGGTTTATCATTTGCACCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGG‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTa                                                      <  2:767566/142‑1 (MQ=255)
                                                                                       acacTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAg                                                     >  2:809284/1‑148 (MQ=255)
                                                                                           tctaaTTGTTATTAGCTTGCGGTTTATCATTTGCATTAGCTGTTGCTGGTGTTACTGTTGTTTCACCTGTTGCCGCTTCTCTATTATTTGGT‑G‑TTGTCGGAGACGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTg                                                 <  2:413274/145‑1 (MQ=255)
                                                                                           tAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTg                                                 <  1:773766/148‑1 (MQ=255)
                                                                                           tAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTg                                                 <  1:37293/148‑1 (MQ=255)
                                                                                              gaTTGTTCTTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGCTGTTACTGTTGTTTCACCTGATGACCCGTCACTACCAATCCGG‑G‑TGGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTcc                                              <  1:477914/147‑1 (MQ=255)
                                                                                              aaTTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTcc                                              <  2:456642/148‑1 (MQ=255)
                                                                                               aTTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCa                                             >  1:95863/1‑148 (MQ=255)
                                                                                                  gTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGtt                                          >  1:760820/1‑147 (MQ=255)
                                                                                                    tattaGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTAtt                                        >  1:164783/1‑148 (MQ=255)
                                                                                                      ttaGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTAtttt                                      <  1:556034/148‑1 (MQ=255)
                                                                                                       taGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTc                                     >  1:540191/1‑148 (MQ=255)
                                                                                                           ttGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGgt                                 >  2:969680/1‑148 (MQ=255)
                                                                                                           ttGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCAGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCGATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATGTTCTGgt                                 >  2:771354/1‑148 (MQ=255)
                                                                                                             gCGGTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGgtgt                               >  1:105359/1‑148 (MQ=255)
                                                                                                                gTTTATCTTTTGCATCATCAGTTGCTGATGTTCCTGTTGTTTCACCTGTTGCCTCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGc                            <  2:338889/148‑1 (MQ=255)
                                                                                                                gTTTATCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGc                            >  2:158738/1‑148 (MQ=255)
                                                                                                                    aTCATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTa                        <  2:817592/148‑1 (MQ=255)
                                                                                                                      cATTTGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGc                      >  2:342128/1‑148 (MQ=255)
                                                                                                                      cATTTGCATCATCAGTTGCTGATGTTAATGTTGTTTCACCTGTTGCCGCATAACTATTAGTTGGT‑A‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGGTAGGTTGGCCAGTATTTTCTGGTGTTGCATTAGc                      >  1:603459/1‑148 (MQ=255)
                                                                                                                         ttGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTGGCGtt                   >  2:650485/1‑148 (MQ=255)
                                                                                                                         ttGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCAtt                   >  1:5500/1‑148 (MQ=255)
                                                                                                                         ttGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCAtt                   >  1:831775/1‑148 (MQ=255)
                                                                                                                         ttGCATCATCAGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTCTCCAGTATTTTCTGGGGTTGCATTAGCAtt                   >  1:111457/1‑148 (MQ=255)
                                                                                                                              tcatcaGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAAt              >  1:645943/1‑148 (MQ=255)
                                                                                                                               catcaGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAAtt             <  1:702999/148‑1 (MQ=255)
                                                                                                                               catcaGTTGCGGCTGTTACTGTTGTGTCCCCTGTTGCCGCATCACTATTATTTGGG‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAAtt             <  1:12532/148‑1 (MQ=255)
                                                                                                                                atcaGTTGCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCGGTATTTTCTGGTGTTGCATTAGCATTTGAAttt            >  1:767778/1‑148 (MQ=255)
                                                                                                                                      tGCTGATGTTCCTTTTGTTTCACGTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGCTGtt      <  2:533540/148‑1 (MQ=255)
                                                                                                                                       gCTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGCTGTTg     <  1:809284/148‑1 (MQ=255)
                                                                                                                                        cTGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGTATTTGCTGTTGc    >  2:575279/1‑148 (MQ=255)
                                                                                                                                        cTGATGTTACTGTTATTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAGGCGTCTGCTTTGCCATTAGCTGTCGTGTCAGGTAAGTTAGGGTGGCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGCGTTTGc    >  2:232325/1‑148 (MQ=255)
                                                                                                                                         tGATGTTAGTGTTGTTTCACCTTTGGCCGCATCCCTTTTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTATCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCAGTAGCATTTGAATTTGCTGTTGca   <  2:211182/148‑1 (MQ=255)
                                                                                                                                         tGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGCTGTTGca   >  2:189923/1‑148 (MQ=255)
                                                                                                                                         tGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGCTGTTGca   <  1:649141/148‑1 (MQ=255)
                                                                                                                                         tGATGGTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCACTAGCATTTGAATTTGCTGTTGca   <  1:591838/148‑1 (MQ=255)
                                                                                                                                         ggATGTTCGTGTTGTTTCCCCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGCTGTTGca   <  2:881015/147‑1 (MQ=255)
                                                                                                                                          gATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTCTTTGGT‑G‑TTGTCGGAGCAGCGTCTGCTTTGCGATTAGCTGTCGTCTCAGATACGTTAGGGTTTCCAGTATTTTGTGGTGTGGCGTTAGCATTTGGATTTGCTGTTGcat  >  1:49138/1‑148 (MQ=255)
                                                                                                                                                |                                                                                                                                               
TTATCAGTTGTGCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGCTGATGTTGCTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGT‑G‑TTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGATACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGCTGTTGCAT  >  CP000730/2279561‑2279846

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑