BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 503635	158 (0.920)	41 (0.260) +TTTTACTAAT	5/276	12.8	21.6%	noncoding (90/93 nt)	USA300HOU_t0003	tRNA‑Ser
*	?	CP000730	= 1996883	161 (0.940)	41 (0.260) +TTTTACTAAT	5/276	12.8	21.6%	noncoding (1/76 nt)	USA300HOU_t0035	tRNA‑Asp
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 167 total aligned reads displayed.

AACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCCCCGCGGCCCGTTAAGGCCCT  >  CP000730/1996735‑1997026

aaCTGCCGACACATGGAGCTTCAATCCATTGCTGTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGAcc                                                                                                                                                  <  2:1430054/149‑1 (MQ=255)

aaCTGCCGACACATGGAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGAcc                                                                                                                                                  <  2:286446/149‑1 (MQ=255)

 acagCCGACACATGGAGCTTCAAACCATTGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCt                                                                                                                                                 <  1:467075/146‑1 (MQ=255)

  cTGCCGACACATGGAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCta                                                                                                                                                >  1:260136/1‑149 (MQ=255)

  cTGCCGACACATGGAGCTTCAATCCATGTCTTTACCAACT‑AAAGATTACCCACAAAGTAAAAATGTAATGATGGCGGTCGCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCta                                                                                                                                                <  1:813271/149‑1 (MQ=14)

   tGCCGACACATGGAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGAAGGACTCCAAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCtat                                                                                                                                               >  1:1251323/1‑149 (MQ=17)

      cGACACATGGAGCTTCAATCCATTGCTCGACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATaaa                                                                                                                                            <  2:827058/149‑1 (MQ=255)

        acacATGGAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCCCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAat                                                                                                                                          <  1:334427/149‑1 (MQ=255)

         cacaTGAACCTCCAATCCAATGCTCAACCAACTCAGCTACTGAAC‑CATAATAAAAACGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAata                                                                                                                                         <  2:66912/149‑1 (MQ=17)

         cacaGGGAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAata                                                                                                                                         <  2:67163/149‑1 (MQ=255)

             tGGAGCTTTAATCCATTGCTCTACCAACTGAGCTACGGAAC‑CATAATAAAAATGGAATGATGGCGGTCTCGACGGTAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGc                                                                                                                                     <  1:658162/149‑1 (MQ=255)

             tGGAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGc                                                                                                                                     >  2:571427/1‑149 (MQ=255)

                aGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACCGGCAGGCGTGTTAACCGCTACACTACGAGCCCTATAAAATATTGCggg                                                                                                                                  >  2:1012268/1‑149 (MQ=255)

                      aaTCCATTGCTCTACCAAGTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGCTCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCgg                                                                                                                            <  2:460910/149‑1 (MQ=255)

                       aTCCATTGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGa                                                                                                                           >  1:1376256/1‑149 (MQ=255)

                       aTCCATTGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGa                                                                                                                           >  1:441321/1‑149 (MQ=255)

                         ccATTGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGAtt                                                                                                                         >  2:39617/1‑149 (MQ=255)

                          cATTGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGAttt                                                                                                                        >  1:716000/1‑149 (MQ=255)

                            ttGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGa                                                                                                                      >  1:1662330/1‑149 (MQ=255)

                             tGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGaa                                                                                                                     <  2:1417561/149‑1 (MQ=255)

                              gCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAac                                                                                                                    <  1:1485533/149‑1 (MQ=255)

                               ctctACAAACTGAGCGACTGAAC‑CAGAATAAAAATGTACTGATGCCGGCCTCGACGGGAATCGAACCCGCGATCTCCTGCGAGACAGGCAGGCGTGTTAACCGCTCCACGACGAGACCTATAAACTATTGCGGGAGGCGGACTTGCacc                                                                                                                   >  2:174812/1‑149 (MQ=18)

                                tctACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATCCAGGTTGACCCTACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAaccc                                                                                                                  >  1:829592/1‑148 (MQ=21)

                                  tACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAaccacc                                                                                                                >  1:106016/1‑149 (MQ=255)

                                    ccAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCgc                                                                                                              >  1:672089/1‑148 (MQ=255)

                                     cAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGGTTTGAACCCCCGAc                                                                                                             >  1:1317010/1‑149 (MQ=255)

                                     cAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGAc                                                                                                             >  1:101053/1‑149 (MQ=255)

                                     cAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGAc                                                                                                             >  2:959379/1‑149 (MQ=255)

                                          gaccgaCTGAAC‑AATAATAAAAATGTAATGATGGCGGTCTCCACGCGAATCGCACCCGCGCTCCCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCg                                                                                                        <  2:1363900/144‑1 (MQ=25)

                                          gAGCTACTGAAC‑CATAATAAAAATGTAAGGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCg                                                                                                        <  1:751906/149‑1 (MQ=255)

                                            gagaCTGAAC‑ACAAAGAAAAATGGAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCCGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCggg                                                                                                      <  2:737719/146‑1 (MQ=21)

                                            gCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCggg                                                                                                      <  2:1079743/149‑1 (MQ=255)

                                            gCTACTGAAC‑CATAATAAAAATGTAATGAAGACATGCTCGAGGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCggg                                                                                                      >  1:836839/1‑149 (MQ=25)

                                             ctactaCAC‑CATAATCACAACGTTCTGATGCTGGTCTCGACGGGAATCGATCCCGCGACCCCCTCCGTGACAGGCAGGCGTGGTAACCGCCACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGt                                                                                                     <  2:334284/149‑1 (MQ=18)

                                                cTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACTTATAAAATATTGCGGGAGGCGGATTTGAACCACCGCCCTTCGGGTTAt                                                                                                  <  1:1228712/149‑1 (MQ=255)

                                                           attaacatatattgatgGCGGTCTCGACTGGAATCGCACCCGCGAGCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCcgacg                                                                                        <  2:1461143/137‑1 (MQ=18)

                                                            taaAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGAcc                                                                                                                                                  <  2:1513812/90‑1 (MQ=255)

                                                            taaAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGAcc                                                                                                                                                  >  1:1513812/1‑90 (MQ=255)

                                                            taaAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGCGGCGGGTTTGTACCACCGCCCTTCGGGTTATGAGCccgccgg                                                                                       >  1:162342/1‑148 (MQ=21)

                                                            taaAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGCCCTTCGGGTTATGGGCCcggcga                                                                                       >  1:56348/1‑149 (MQ=255)

                                                            taaAAACGGTATGGTGGCGGTCTCGACGGGAATTCAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTGAACCGCTACACTACGAGCCCTATAAAATATTGCGGGATGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCcgacga                                                                                       <  2:1068654/149‑1 (MQ=18)

                                                             aaaaaTGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAg                                                                                      >  2:365795/1‑149 (MQ=255)

                                                             aaaaaTGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAg                                                                                      >  1:1034104/1‑149 (MQ=255)

                                                             aaaaaTGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCAACGACCTTCGGGTTATGAGCCCGACGAg                                                                                      >  1:725970/1‑149 (MQ=255)

                                                             aaaaaTGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTAAACTACGAGTCGTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAg                                                                                      >  1:1253508/1‑149 (MQ=255)

                                                             aaaaaTGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCCCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGAGCTTCGGGTTATGAGCCCGACGAg                                                                                      <  1:1281043/149‑1 (MQ=255)

                                                               aaaTGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAACTATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCt                                                                                    >  2:306260/1‑149 (MQ=255)

                                                                aaTGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTa                                                                                   >  1:942012/1‑149 (MQ=255)

                                                                aaTGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGAGCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCGATAAAATATTGCGGGAGGCGGATTTGAACCCCCGGCCGTCGGGTTATGAGCCCGGCGGGCtc                                                                                   >  1:641968/1‑148 (MQ=21)

                                                                aaTGTAATGATGGCGGTCTCGACGCGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCAACGACCTTCGGGGTATGGGCCcgccgacctc                                                                                   >  1:1023962/1‑145 (MQ=21)

                                                                     aaTGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGGACCACCGGCCTTCGGGTTATGAGCCCGCCGAGCTACCGaa                                                                              >  1:600920/1‑149 (MQ=255)

                                                                       ggatgGCGGTCTCGACGGGACGCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAGCCGCGACACTACGAGACCTATAAACTATCGCGGCAGGCGGATTTGAACCACCGGCCTTCGGGTTATGAGCCCGACGAGCTACCGAACt                                                                            <  2:66236/148‑1 (MQ=18)

                                                                         atgGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGc                                                                          >  2:1690596/1‑149 (MQ=255)

                                                                         atgGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACGGc                                                                          >  1:693147/1‑149 (MQ=255)

                                                                         atgCCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATCTTGCGGGAGGCCGATTTGTACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGc                                                                          <  2:1294987/149‑1 (MQ=255)

                                                                           ggCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGAGTTGAACCACCGACCTTCGTGTTATGAGCCCGACGAGCTCCCGGACGGcgc                                                                        >  1:513813/1‑147 (MQ=18)

                                                                           ggCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATAGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTc                                                                        >  1:1160633/1‑149 (MQ=255)

                                                                                 tccGACGGGAATCCGACCCGCGGTCTCCTGCGTGACAGGCAGGCTTGTTAACCGCTACACTACGAGACCTATATTATATTGCGGGGGGCGGATTTGTACCTCCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑ccc                                                                 <  2:968829/147‑1 (MQ=18)

                                                                                 ctcGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCTTGTTAACCGCTACACTACGAGACCTATAACATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑ccc                                                                 <  1:1599721/149‑1 (MQ=255)

                                                                                  tcGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCcg                                                                <  2:260136/149‑1 (MQ=255)

                                                                                  tcGACGGGAATCGAACCCGCGATCGCCTGCGTGACGGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCcg                                                                <  1:414792/149‑1 (MQ=255)

                                                                                  ccGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCcg                                                                <  1:1719198/148‑1 (MQ=255)

                                                                                   cGACGGCAATCGAACGCGCCATCTCCTGCGTGACAGGCAGGCGTGTGAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCcgc                                                               <  2:449743/149‑1 (MQ=255)

                                                                                    ggcGGGAACCGAACCCGCGATCTCCGGGGTGACAGGCAGGCGTGTTAACCGCTCCACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGATCTACCGAACTGCTCCAT‑CCcgcg                                                              <  2:395613/147‑1 (MQ=18)

                                                                                    gACGGGATTCAAACCCGCGAGCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATTTTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTGATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCcgcg                                                              <  2:1037557/149‑1 (MQ=18)

                                                                                    gACGGCAATCGAACCCGCGATCTCCGGCGGGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGCGCCCGACGAGCTACCGAACTGCTCCAT‑CCcgcg                                                              <  1:54726/149‑1 (MQ=255)

                                                                                    caCGGGAATCGAACCCGCCACCTGCTGCGTGACAGGCAGGCGTGTTAACCGCTCCACTACGAGACCTATAAAATATTGCGGGCGTCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACCAGCTACCGAACTGCTCCAT‑CCcgcg                                                              <  1:918272/148‑1 (MQ=18)

                                                                                     aCGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGa                                                             <  2:619333/149‑1 (MQ=255)

                                                                                          aaTCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGataata                                                        >  1:1187734/1‑149 (MQ=255)

                                                                                          aaTCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGataata                                                        >  2:1400497/1‑149 (MQ=255)

                                                                                           aTCGAACCCGCGTTCTGCTGCGTGACAGGCAGGGGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGAtaataa                                                       <  1:594831/149‑1 (MQ=255)

                                                                                           aTCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCGTTCGATCTACCGAACTGCTCCAT‑CCCGCGAtaataa                                                       <  1:1265621/149‑1 (MQ=255)

                                                                                           aTCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGAtaataa                                                       <  1:774014/149‑1 (MQ=255)

                                                                                           aTCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGACGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGAtaataa                                                       <  1:326806/149‑1 (MQ=255)

                                                                                                aCCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAaat                                                  >  1:1132332/1‑149 (MQ=255)

                                                                                                             tGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGaa                                     >  2:1556895/1‑149 (MQ=255)

                                                                                                              ggatgtcaggtcggcGGGATAACCGCTACACTACGATACCTATCAAATATTGCGGGAGGCGGATTTGAACCCCCGCCCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATACAAAATAATGGCGGAGGAag                                    <  2:1703941/137‑1 (MQ=21)

                                                                                                                 tGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGGACCCCCGACCTTCGGGTTATGAGCCCGAGGGGCTAGCGAACTGCGCCAT‑CCCCCGCTAATAAAAAATAATGGCGGAGGAAGAgg                                 >  2:803776/1‑149 (MQ=25)

                                                                                                                   aCAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAGGAGGGa                               >  1:1508725/1‑149 (MQ=255)

                                                                                                                     aggcaggcGTGTCAATCGCCACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGAtt                             <  2:1551330/149‑1 (MQ=255)

                                                                                                                      ggcaggcGTGTTAACCGCTACACTACGAGACCTATAAACTATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTc                            <  2:1324662/149‑1 (MQ=255)

                                                                                                                      ggcaggcGTGTTAACCGCTACACCTCGAGACCTATAAAATCTTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTc                            <  1:60521/149‑1 (MQ=255)

                                                                                                                       gcaggcGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGGTACCGAACTGCTCCAT‑CCCGCGCTAATAGAAAATAATGGCGGAGGAAGGGGGATTCg                           >  2:219077/1‑149 (MQ=255)

                                                                                                                         aggcGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGCCCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGaa                         <  1:765235/149‑1 (MQ=255)

                                                                                                                                 tAACCCCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCCCcgcg                 <  2:1567133/149‑1 (MQ=255)

                                                                                                                                     cacTAGACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCCCCGCGGccc             <  2:424798/147‑1 (MQ=255)

                                                                                                                                      gcgacacTACGAGACCTACAAAATATTGCGGGAGGCGGATTTGAACCACCGACCGTCGGGTTATGAGCCCGACGAGTTACCGATCCGCCGCATCCCCTGGATTA‑GATTAATAATGGCGGAGGAAGAGGGATTCGAACCCCCGCGGCCCg            <  1:406221/146‑1 (MQ=18)

                                                                                                                                      gccacacTACGAGACCTATAAGTTATTGCGCGAGGCGGATTTCAACCACCGCCCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCCCCGCGGCCCg            <  2:600365/146‑1 (MQ=25)

                                                                                                                                      gCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCCCCGCGGCCCg            <  1:959379/149‑1 (MQ=255)

                                                                                                                                      gCTACACTACGAGACCTATAAAATATGGCGGGAGGCGGATTTGAACCCCCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCCCCGCGGCCCg            <  1:270745/149‑1 (MQ=255)

                                                                                                                                      gCTACACTACGAGACCTATAAAATATAGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAACCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCTGAGGAAGAGAGAGTCGAACCCCcgcgagccg            >  1:417969/1‑144 (MQ=25)

                                                                                                                                      ccTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCCCCGCGGCCCg            <  2:1317010/148‑1 (MQ=255)

                                                                                                                                       ccacacTACGAGACCTATAAAATATTACGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCCCCTT‑CCCGCGCTCATCAGTAGTAATGGCCGAGGAAGAGGGATTGGAACCCCCGCGGCCCGt           <  1:1260662/147‑1 (MQ=21)

                                                                                                                                       cTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCCCCGCGGCCCGt           <  2:1132332/149‑1 (MQ=255)

                                                                                                                                       cTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCCCCGCGGCCCGt           <  1:365795/149‑1 (MQ=255)

                                                                                                                                           acTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCCCCGCGGCCCGTTAAg       >  1:1465054/1‑149 (MQ=255)

                                                                                                                                               cGAGACCTATAACATTTTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATGCGAACCCCCGTGGCCCGTTAAGGccc   <  1:1074089/149‑1 (MQ=255)

                                                                                                                                               cGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCCCCGCGGCCCGTTAAGGccc   <  1:306260/149‑1 (MQ=255)

                                                                                                                                                gagaCCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGAGGAGCTAACGAACTGCTCGCT‑CCCGCGATAATAAAAAATAATGGGGGGGGAGGGGGGATTCGGACCGCGGCGGCCGGTTAAGGGCCt  >  2:1183994/1‑149 (MQ=18)

                                                                                                                                                gagaCCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGGTTCGCACCCCCGCGGCCCGGTacagacct  >  2:124544/1‑142 (MQ=25)

AACTGCCGACACATGGAGCTTCAATCCATTGCTCTACCAACTGAGCTACTGAAC‑CATAATAAAAATGTAATGATGGCGGTCTCGACGGGAATCGAACCCGCGATCTCCTGCGTGACAGGCAGGCGTGTTAACCGCTACACTACGAGACCTATAAAATATTGCGGGAGGCGGATTTGAACCACCGACCTTCGGGTTATGAGCCCGACGAGCTACCGAACTGCTCCAT‑CCCGCGATAATAAAAAATAATGGCGGAGGAAGAGGGATTCGAACCCCCGCGGCCCGTTAAGGCCCT  >  CP000730/1996735‑1997026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.