BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP000730	479,553	G→A	A194T (GCA→ACA)	USA300HOU_0458 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	479,553	0	G	A	100.0%	713.1 / NA	219	A194T (GCA→ACA)	USA300HOU_0458	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (97/122); total (97/122)

Only 100 of 222 total aligned reads displayed.

CCGATGAGTGATGCAATAATAGATGAACAAGGTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATGCATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTCAATAGATCAGGAAGACTACCAAGCTTATGT  >  CP000730/479409‑479698

  gATGAGTGATGCAATAATAGATGAACAAGGTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGt                                                                                                                                             >  2:601710/1‑149 (MQ=255)

              aataatAGATGAACAAGGTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAgcgc                                                                                                                                 <  1:1004063/149‑1 (MQ=255)

               ataataGGTGAACAAGGTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCa                                                                                                                                <  2:229599/149‑1 (MQ=255)

               ataataGATGAACAAGGTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGAATTTAGCGCa                                                                                                                                >  2:534846/1‑149 (MQ=255)

               ataataGATGAACAAGGTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGG‑CGCTGTTGCAAGCGTGAGCAAAGTTTTTTCCATACATGGTTGCATTTAGCGCa                                                                                                                                >  1:1680475/1‑149 (MQ=255)

                  ataGATGAACAAGGTGATCCACTTAGCGAACAAGTGAATCGTCAAATGAGTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATGTAGCCGAACa                                                                                                                             >  1:1261189/1‑149 (MQ=255)

                    aGATGAACAAGGTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATg                                                                                                                           <  2:1093058/149‑1 (MQ=255)

                     gATGAACAAGGTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGa                                                                                                                          >  2:1127725/1‑149 (MQ=255)

                      aTGAACAAGGTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGAc                                                                                                                         >  1:1093073/1‑149 (MQ=255)

                       tcaaCAAGGTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTAGATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGAcc                                                                                                                        <  2:1556545/147‑1 (MQ=255)

                       tGAACAAGGTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGAcc                                                                                                                        <  2:1318662/149‑1 (MQ=255)

                         aaCAAGGTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCAt                                                                                                                      >  1:608708/1‑149 (MQ=255)

                          aCAAGGTGAGCCACTTAACGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATa                                                                                                                     <  2:1169559/149‑1 (MQ=255)

                          aCAAGGGGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATa                                                                                                                     <  1:856694/149‑1 (MQ=255)

                             aGGTGAGCCACTTAGCGAACAAGTGAATCGTTAAATGATAAACTGGCAGAATGTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTACCGCAACATGACCATAGtt                                                                                                                  <  1:1244664/149‑1 (MQ=255)

                             aGGTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGtt                                                                                                                  <  1:1471321/149‑1 (MQ=255)

                               gTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGtttt                                                                                                                <  2:1038459/149‑1 (MQ=255)

                               gTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGtttt                                                                                                                <  1:315529/149‑1 (MQ=255)

                                  aGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACt                                                                                                             >  1:1351088/1‑149 (MQ=255)

                                    ccACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTCAGCGCAACATGACCATAGTTTTACTaa                                                                                                           <  1:1120002/149‑1 (MQ=255)

                                    ccACGTAGCTAACAAGTGAATCGTAAAATTATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTaa                                                                                                           <  1:811197/149‑1 (MQ=255)

                                    caaCTTAGCGAACAAGTCATTCCTCAAATTCTTAAATGGACGAAAATTTACATAGATCAATTTCTATCGAGTTGGTCACTGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTaa                                                                                                           <  1:104258/147‑1 (MQ=255)

                                           gCGAGCAAGTGAGTCGTCAAATGAATAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACCAAAGCACAg                                                                                                    >  2:1440828/1‑149 (MQ=255)

                                            cGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAgc                                                                                                   >  2:937696/1‑149 (MQ=255)

                                            cGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAgc                                                                                                   >  1:715503/1‑149 (MQ=255)

                                            cGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTAATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTATTACTAAAGCACAgc                                                                                                   >  1:172377/1‑149 (MQ=255)

                                             gAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAgcg                                                                                                  >  1:619660/1‑149 (MQ=255)

                                               aCAAGTGAATCGTCAAATGATTAAATGTACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGcc                                                                                                >  1:1007022/1‑149 (MQ=255)

                                               aCAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATGTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGcc                                                                                                >  1:1328310/1‑149 (MQ=255)

                                                cAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCa                                                                                               <  1:996226/149‑1 (MQ=255)

                                                cAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCa                                                                                               <  1:1283115/149‑1 (MQ=255)

                                                   gTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGt                                                                                            <  1:1203651/149‑1 (MQ=255)

                                                    tGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTg                                                                                           >  2:1275061/1‑149 (MQ=255)

                                                    tGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTg                                                                                           <  1:875641/149‑1 (MQ=255)

                                                    ggAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCTAtgtg                                                                                           <  2:637393/148‑1 (MQ=255)

                                                      aaTCGTCAAATGATTAAATGGACGAAAGTTTATATCGATCAAGTCCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCTAAGTTTTTTCCATACATCGTTGCATGTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGAt                                                                                         <  2:830652/149‑1 (MQ=255)

                                                          gTCAACTGATTAAATGGACGAAAATTACTATCGCTCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTaaa                                                                                     <  1:346385/149‑1 (MQ=255)

                                                           tCAAATGATTAGATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAg                                                                                    <  2:678037/149‑1 (MQ=255)

                                                           tCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAg                                                                                    <  1:1398973/149‑1 (MQ=255)

                                                            cAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCAGACAGGGTTGCATTTAGCGCAACATGACCATAGGTGTACTCAAGCGCAGCGCCAAGTGATAAAAgg                                                                                   >  1:681541/1‑149 (MQ=255)

                                                               aTGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCtt                                                                                <  1:430967/149‑1 (MQ=255)

                                                               aTGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCtt                                                                                <  2:1049642/149‑1 (MQ=255)

                                                                  aTTAAATGGACGAACCTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAGAGGCttcca                                                                             <  2:453453/149‑4 (MQ=255)

                                                                  aTTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTAcc                                                                             <  2:1598652/149‑1 (MQ=255)

                                                                  aTTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTAcc                                                                             >  2:1061762/1‑149 (MQ=255)

                                                                  aTTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTAcc                                                                             <  1:762014/149‑1 (MQ=255)

                                                                    tAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCCTAGTTTTACTAAAGCGCAGCGCCAAGTGATTAAAGGCTTACCCa                                                                           >  1:182812/1‑149 (MQ=255)

                                                                     aaaTGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTCCAGGCTTACCCaa                                                                          >  2:1196752/1‑149 (MQ=255)

                                                                       aTGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCGAAGTTTTTACCATACATGGTTGCATTTAGCGCAAAATGACCATAGATTTACTAAAGCACACAGCCAAGTGAGTAAGCGCTTACCCAATg                                                                        >  2:1362810/1‑149 (MQ=255)

                                                                       aTGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATg                                                                        >  1:1450069/1‑149 (MQ=255)

                                                                          taCGAAACTGTATATCGATCAAGTTCGATCGAGTTGGACAATGCCG‑AAGCGTGGGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCAAAGTCTATCAAGAGCGCGCCGCCAAGTGAATAAGGGCTTACCCAATGATc                                                                     >  2:358017/2‑149 (MQ=255)

                                                                          gACGAAACTTTATATCGATCAATTTCAATCGAGTTGGACAATGCCG‑AAGCGAGAACAAAGTACTTACCATACATGATTGCAATTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATCAAAGGCATACCCAATGATc                                                                     >  1:464305/1‑149 (MQ=255)

                                                                             gAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCAG‑AAGCGTGAGATGAGTTATTAACATACATGGTTGCATTTAGCGAAGCATGAGCATAGTTTTACGAAATCATGGCGACAAGTGATTTCACGCCTAGCCACTGAGCCta                                                                  >  2:903260/1‑148 (MQ=255)

                                                                                  tttATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATg                                                             <  2:1502688/149‑1 (MQ=255)

                                                                                  tgcagaacgctCAATTTCTTTCCAGTTGGACAATGCCG‑AAGCGGGAGCAAAGTTGTTACCATACATGGTTGCATTTCGCGCAACATGACCGTAGTGTGACTAATGCACAGCGTCCAGTGATTAAAGGCTTACCCAATGATCCTGAAATg                                                             <  2:262159/139‑1 (MQ=255)

                                                                                    tataTCGATCAATTTCGATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGAc                                                           <  1:255179/149‑1 (MQ=255)

                                                                                     atatCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACg                                                          <  2:1458908/149‑1 (MQ=255)

                                                                                     atatCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACg                                                          <  1:921601/149‑1 (MQ=255)

                                                                                     atatCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACg                                                          <  1:601710/149‑1 (MQ=255)

                                                                                      tatCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGa                                                         <  1:951574/149‑1 (MQ=255)

                                                                                       atCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGAt                                                        <  1:1239558/149‑1 (MQ=255)

                                                                                         cGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATACTGAAATGACGATag                                                      >  2:1427534/1‑149 (MQ=255)

                                                                                           aTCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATagag                                                    >  1:1654954/1‑149 (MQ=255)

                                                                                            tCAAATTCTATCGAGTTGGACAATTCCG‑AAGCCTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTGACCCAATGATCCTGAAATGACGATACAGt                                                   <  2:800263/149‑1 (MQ=255)

                                                                                             cAATTTCTATCGAGTTGGGCAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCATAGCGCCAAGTGATTAAAGGCTTATCCAATGATCCTGAAATGACGATAGAGTc                                                  <  2:942084/149‑1 (MQ=255)

                                                                                             cAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTc                                                  <  2:1406272/149‑1 (MQ=255)

                                                                                             cAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGAGAGATTc                                                  <  2:1576824/149‑1 (MQ=255)

                                                                                               aTTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAg                                                >  1:333134/1‑149 (MQ=255)

                                                                                                  tCTATCGAGTTGGACAATGCCG‑GAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGATGATAGAGTCAGTAt                                             >  1:900392/1‑149 (MQ=255)

                                                                                                  tCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTATACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTAt                                             <  2:330332/149‑1 (MQ=255)

                                                                                                    taccGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTa                                           <  2:1019486/146‑1 (MQ=255)

                                                                                                    tATCGGGTTGGACAATGCCG‑AAGCGTTTGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGGTTAAAGGTTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTa                                           <  2:1638458/149‑1 (MQ=255)

                                                                                                       cGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTTGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGATTCAGGATTAAcc                                        >  2:1113688/1‑148 (MQ=255)

                                                                                                       cGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTTCTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACt                                        <  2:464305/149‑1 (MQ=255)

                                                                                                       cGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAAcc                                        >  2:1523122/1‑148 (MQ=255)

                                                                                                        gAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTGTTAACTc                                       >  1:795653/1‑149 (MQ=255)

                                                                                                        gAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTc                                       >  1:1526049/1‑149 (MQ=255)

                                                                                                         aGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCa                                      <  1:297032/149‑1 (MQ=255)

                                                                                                         aGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCa                                      <  2:1710059/149‑1 (MQ=255)

                                                                                                         aGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTACTAACTCa                                      >  1:552630/1‑149 (MQ=255)

                                                                                                          gTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTAGTAACTCAt                                     >  1:306744/1‑149 (MQ=255)

                                                                                                           ttGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCAtt                                    >  1:38102/1‑149 (MQ=255)

                                                                                                           ttGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCAtt                                    <  1:707353/149‑1 (MQ=255)

                                                                                                             ggACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCCTTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCAtttt                                  <  2:1354982/149‑1 (MQ=255)

                                                                                                               agaaggcag‑AAGCGGGAGCAAAGTTTTTACCATACATGGTTGCACTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTc                                <  1:806640/141‑1 (MQ=255)

                                                                                                               aCAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTc                                <  2:502060/149‑1 (MQ=255)

                                                                                                                cAATGCCT‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTCa                               <  2:410244/149‑1 (MQ=255)

                                                                                                                cAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTCa                               <  2:1646058/149‑1 (MQ=255)

                                                                                                                cAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTCa                               <  2:616611/149‑1 (MQ=255)

                                                                                                                 aaTGCCG‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTCaa                              <  1:468339/149‑1 (MQ=255)

                                                                                                                       g‑AAGCGTGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTCAATAGATc                        >  1:579626/1‑149 (MQ=255)

                                                                                                                              tGAGCAAAGTTTTTACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTCAATAGATCAGGAAg                  <  2:432709/149‑1 (MQ=255)

                                                                                                                                   aaaGTTTTTACCATACATGGTTGCATTTACCGCATCATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGGTCCTGAACTGACGATAGAGTCAGTATTAACTCATTGTTCAATAGATCAGGAAGATTAc             >  2:1659384/1‑149 (MQ=255)

                                                                                                                                       tttttACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTCAATAGATCAGGAAGACTACCAAg         <  2:1689167/149‑1 (MQ=255)

                                                                                                                                       tttttACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTCAATAGATCAGGAAGACTACCAAg         <  2:888564/149‑1 (MQ=255)

                                                                                                                                        ttttACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTCAATAGATCAGGAAGACTACCAAGc        <  2:864528/149‑1 (MQ=255)

                                                                                                                                        ttttACCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTCAATAGATCAGGAAGACTACCAAGc        <  1:83002/149‑1 (MQ=255)

                                                                                                                                          ttgccATACAGGGTTGCATTTAGCGTAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTCAATAGATCAGGAAGACTACCAAGCtt      <  2:57280/146‑1 (MQ=255)

                                                                                                                                            aCCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAATGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTCAATAGATGAGGAAGACTACCAAGCTTAt    >  1:1272449/1‑149 (MQ=255)

                                                                                                                                            aCCATACATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTCAATAGATCAGGAAGACTACCAAGCTTAt    >  1:195143/1‑149 (MQ=255)

CCGATGAGTGATGCAATAATAGATGAACAAGGTGAGCCACTTAGCGAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGATCAATTTCTATCGAGTTGGACAATGCCG‑AAGCGTGAGCAAAGTTTTTACCATGCATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTAAAGGCTTACCCAATGATCCTGAAATGACGATAGAGTCAGTATTAACTCATTTTTCAATAGATCAGGAAGACTACCAAGCTTATGT  >  CP000730/479409‑479698

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`