New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 1205323104 (0.790)26 (0.270)
+AGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAG		 8/218 6.1 22.1% intergenic (+459/‑365) yfiE/lspA possible lactoylglutathione lyase/A8 family signal peptidase II
?CP000730 2478252 = 143 (1.090)intergenic (+139/+932) USA300HOU_2340/htrB hypothetical membrane protein/hemin ABC superfamily ATP binding cassette transporter, ABC protein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 143 total aligned reads displayed.

AATAGTTAATCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGGGTCCCTT  >  CP000730/2478105‑2478396
                                                                                                                                                     |                                                                                                                                                
aataGTTAATCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTaaaaaaa                                                                                                                                                  >  2:626797/1‑148 (MQ=255)
aataGTTAATCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTaaaaaaa                                                                                                                                                  <  1:763519/148‑1 (MQ=255)
 ataGTTAATCCACAAACAAACTATTATTATAGGTTGTTTCGAATATTGCGTCAAACTATCCTAAAATATTCGTTAATC‑CTTGATTATACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTaaaaaaaa                                                                                                                                                 <  2:678160/148‑1 (MQ=255)
  taGTTAATCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAAc                                                                                                                                                >  2:487822/1‑148 (MQ=255)
  taGTTAATCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATGAATCCCTaaaaaaaaa                                                                                                                                                >  2:1096949/1‑147 (MQ=255)
  taGTTAATCCACAAACAAAAAAATATTATAGGTTATCGTGGCTATTTCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTaaacaaaaa                                                                                                                                                >  2:238339/1‑147 (MQ=255)
    gTTAATCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAAcag                                                                                                                                              <  1:1271213/148‑1 (MQ=255)
    gTTAATCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAAcag                                                                                                                                              <  1:1317988/148‑1 (MQ=255)
     ttAATCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAACAAAcagc                                                                                                                                             >  1:195572/1‑148 (MQ=255)
     ttAATCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCAAAAAAAAAcagc                                                                                                                                             >  2:480990/1‑148 (MQ=255)
       aaTCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTATTCCCTAAAAAAAAcagcag                                                                                                                                           >  1:302356/1‑148 (MQ=255)
       aaTCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAAcagcag                                                                                                                                           >  2:536527/1‑148 (MQ=255)
       aaTCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGCAC‑ATTAATCCCTAAAACAAAcagcag                                                                                                                                           >  2:1199289/1‑148 (MQ=255)
        aTCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGt                                                                                                                                          >  1:1223414/1‑148 (MQ=255)
         tCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTa                                                                                                                                         <  1:70764/148‑1 (MQ=255)
          ccACAAACAAACTATTATTATAGGTTGTTTCTAATAATGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTaa                                                                                                                                        <  2:1103813/148‑1 (MQ=255)
            acaaacaaACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGa                                                                                                                                      <  1:550283/148‑1 (MQ=255)
             caaacaaaCTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGAt                                                                                                                                     <  1:1292372/148‑1 (MQ=255)
              aaacaaacTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATa                                                                                                                                    <  1:897317/148‑1 (MQ=255)
                acaaacTATTATTATAGGTTGATTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAAt                                                                                                                                  <  2:1215344/148‑1 (MQ=255)
                 caaacTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAAtt                                                                                                                                 >  1:147971/1‑148 (MQ=255)
                   aacTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAAtttt                                                                                                                               >  1:837304/1‑148 (MQ=255)
                   aacTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAAtttt                                                                                                                               >  1:1076511/1‑148 (MQ=255)
                      tattattatAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCaa                                                                                                                            <  2:444947/148‑1 (MQ=255)
                         tattatAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGATAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTCAAGAGTCAGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTa                                                                                                                         >  1:1038987/1‑148 (MQ=255)
                           ttatAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGa                                                                                                                       <  2:33625/148‑1 (MQ=255)
                            tataGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGTGAC‑ATTAATCCCTAAAAAAAACAGCGGACAGATaaatgtaaataagca                                                                                                                      >  2:1319402/1‑135 (MQ=255)
                             ataGGTTGTTTCTAAGATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCATTTAGaaa                                                                                                                     >  1:884705/1‑148 (MQ=255)
                                ggTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAata                                                                                                                  >  1:1290227/1‑148 (MQ=255)
                                ggTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAata                                                                                                                  >  1:431201/1‑148 (MQ=255)
                                ggTTGTTTCTAATATTGCGTCAAACTATATTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACTGCAGTAAGATAATTTTCAATTAGAAAata                                                                                                                  >  1:859666/1‑148 (MQ=255)
                                  ttgttTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGAAACATAATTTTCAATTAGAAAataca                                                                                                                >  2:807995/1‑146 (MQ=255)
                                  ttgttTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAAACAATTGTTATATTAAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGACAATATc                                                                                                                >  2:5816/1‑148 (MQ=255)
                                           atatTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTActgctg                                                                                                       >  1:1108602/1‑148 (MQ=255)
                                               tGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTACTCCCTACAAAACACAGCAGTAAGATAATTTTCAAGTAGAAAATATCTTACTGCTGTtcg                                                                                                   <  1:281825/148‑2 (MQ=255)
                                               tGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTtct                                                                                                   <  1:419885/148‑1 (MQ=255)
                                               tGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTCCTGTtct                                                                                                   >  1:586659/1‑148 (MQ=255)
                                               tGCGTCAAACTATCTTTAAATAATCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAACAAACAGCAGGAAGATAATTTTCAATTAGAAAATATCTTACCGCTGGtct                                                                                                   >  2:961659/1‑148 (MQ=37)
                                               tGCGTCAAACTAGCTTGAAAGATTCGTAACTG‑CTTGATTAGACAATTGTTATATTGAAAATAAATATACTAAAGGGTCTGGGAT‑AAAAAACAAAAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTtct                                                                                                   <  2:700587/148‑1 (MQ=21)
                                                   tCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTAt                                                                                               >  1:692231/1‑148 (MQ=255)
                                                     aaaCTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTAttt                                                                                             <  2:1031102/148‑1 (MQ=255)
                                                      aaCTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTta                                                                                            <  1:1353301/148‑1 (MQ=255)
                                                       aCTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTtat                                                                                           >  2:1269942/1‑148 (MQ=255)
                                                                 aaTATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTc                                                                                 >  2:1227774/1‑148 (MQ=255)
                                                                 aaTAGTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAAACACTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTc                                                                                 <  2:1160826/148‑1 (MQ=255)
                                                                  atatTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCg                                                                                <  2:1222198/148‑1 (MQ=255)
                                                                     ttCGTTAATCGCTTG‑TTAGAACATTGGTATATGAAAAATAAACAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTAt                                                                             <  1:1033226/148‑1 (MQ=18)
                                                                       cGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTg                                                                           >  2:456492/1‑148 (MQ=255)
                                                                        gTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGa                                                                          <  1:1306349/148‑1 (MQ=255)
                                                                                         aCAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTCAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGCCTTCGTTATccc                                                          >  2:536247/1‑148 (MQ=255)
                                                                                         aCAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGcc                                                          >  2:100408/1‑148 (MQ=255)
                                                                                         aCAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGcc                                                          >  2:533527/1‑148 (MQ=255)
                                                                                              tGTTATATTGAAAATAAATACACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCt                                                     <  1:803306/148‑1 (MQ=255)
                                                                                                 tataTTTAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATTCCTAAAAAAAACTGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGc                                                  <  2:637964/148‑1 (MQ=255)
                                                                                                  atatTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGca                                                 <  2:173359/148‑1 (MQ=255)
                                                                                                    atTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATACCCATCTGGcaca                                               >  2:322674/1‑148 (MQ=255)
                                                                                                      tGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGTTTCGCTATGCCCATCTGGCACAtt                                             <  1:839513/148‑1 (MQ=255)
                                                                                                      tGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACAtt                                             >  1:444049/1‑148 (MQ=255)
                                                                                                      tGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACAtt                                             <  2:1076511/148‑1 (MQ=255)
                                                                                                      tGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACAtt                                             <  2:837304/148‑1 (MQ=255)
                                                                                                       gAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTa                                            <  1:933631/148‑1 (MQ=255)
                                                                                                        aaaaTAAATAAACTAAAGCGTCTGGGAC‑AATAATCCCTCAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTAc                                           <  1:637394/148‑1 (MQ=255)
                                                                                                        aaaaTAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTAc                                           >  2:1212035/1‑148 (MQ=255)
                                                                                                        aaaaTAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTAc                                           >  1:384033/1‑148 (MQ=255)
                                                                                                         aaataaatAAACTAAAGATTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCACTTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACt                                          >  2:514600/1‑148 (MQ=255)
                                                                                                         aaataaaaAAACTAAAGAGGC‑GGGACTATTAAACCCAAAAAAACACAGCAGTAAGATACTTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACt                                          <  1:572243/148‑1 (MQ=17)
                                                                                                          aataaataAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTg                                         <  1:900906/148‑1 (MQ=255)
                                                                                                           ataaataaACTAAAGAGTCTGGGAC‑ATTAGTCCCTAAAAAAAACAGCAGTAAGCTAATTTTCAATTAGAAAATATCTTACTGCTGTTCTATATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCTTCTGGCACATTACTGt                                        <  2:1038987/148‑1 (MQ=255)
                                                                                                              aataaaCTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTaaa                                     <  1:1232457/148‑1 (MQ=255)
                                                                                                              aataaaCTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTaaa                                     >  1:553351/1‑148 (MQ=255)
                                                                                                              aataaaCTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTaaa                                     <  1:241481/148‑1 (MQ=255)
                                                                                                                 aaaCTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAAtt                                  <  2:859666/148‑1 (MQ=255)
                                                                                                                 aaaCTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAAtt                                  <  2:431201/148‑1 (MQ=255)
                                                                                                                   aCTAAAGAGTCTGGGAT‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCt                                <  1:923196/148‑1 (MQ=255)
                                                                                                                   aCTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCt                                <  1:1189358/148‑1 (MQ=255)
                                                                                                                   aCTAAAGAGTCTGGGAC‑ATTAATCAACAAAAACAACCGAAGAACTATCATTTTCAGTTCGAATTTATCTTACTGCTGTTCTCTATTTTTATTAGACTTCTTTTTGAATTGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCt                                <  2:1031854/148‑1 (MQ=9)
                                                                                                                   aCTAAAGAGTCTGGGAC‑ATTAAACCCTAAAAAAAACAACAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCt                                >  1:752631/1‑148 (MQ=255)
                                                                                                                    cTAAATAGTCTGGAAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCta                               <  2:811597/148‑1 (MQ=255)
                                                                                                                    cTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCta                               >  1:691565/1‑148 (MQ=255)
                                                                                                                     tAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTATCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCtat                              >  1:967565/1‑148 (MQ=255)
                                                                                                                      agacaggcTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCACCTGGCACATTACTGTAAAATTCtata                             >  2:870323/8‑148 (MQ=255)
                                                                                                                      aaaGAGTCTGGTAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATACCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCtata                             <  2:1768/148‑1 (MQ=255)
                                                                                                                      aaaGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCtata                             <  1:51921/148‑1 (MQ=255)
                                                                                                                      aaaGAGTCCGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCtata                             <  2:116139/148‑1 (MQ=255)
                                                                                                                       tagttgcttggAC‑ATTAATCCCTAAAAAAAACAGCAGTACTATACCTTTCAATGAGAAAATACCTTACTCCTGTTTATTATTTATACAATACTCCGTATTGAATGGCTTCGCTATGCCCATCGGGCCCCTTCCTGTAAAATTCTATaa                            <  2:391529/139‑1 (MQ=17)
                                                                                                                       acgagTCTGGGAC‑ATTAATCCCAAAAAAAAACAGTAGCAAGATAATTTTCAATTAGAAAATATCCTAGTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTTGTACATTACTGTAAAATTCTATaa                            <  2:391665/146‑1 (MQ=14)
                                                                                                                       aaGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATaa                            >  1:1343171/1‑148 (MQ=255)
                                                                                                                          agTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTGCTGTAAAATTCTTTACATa                         >  1:472749/1‑148 (MQ=255)
                                                                                                                                       tAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTtgatg             >  2:750133/1‑148 (MQ=255)
                                                                                                                                         aTCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCGTCGGGCACATTACGGTAAAATTCTATAAATAGAATTTTTGTTGAc           >  1:385927/1‑148 (MQ=255)
                                                                                                                                         aTCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGAc           >  1:202131/1‑148 (MQ=255)
                                                                                                                                         aTCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGAc           >  1:1122021/1‑148 (MQ=255)
                                                                                                                                          tCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACg          <  2:1382765/148‑1 (MQ=255)
                                                                                                                                          accttAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACg          <  2:966309/144‑1 (MQ=255)
                                                                                                                                              tAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGGGTc      <  1:710412/148‑1 (MQ=40)
                                                                                                                                              tAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGGGTc      >  2:726139/1‑148 (MQ=38)
                                                                                                                                              tAAAAAAAACAGCAGTAAGATAACTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTACACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACACTAGTGTAAAATTCTATAAATAGAATTTTTGATGACGGGTc      <  1:305367/148‑1 (MQ=255)
                                                                                                                                               aaaaaaaaCAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGGGTcc     >  1:1264685/1‑148 (MQ=40)
                                                                                                                                                 aaaaaaCAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGATGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCAATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGGTTACCt   >  2:1364638/1‑148 (MQ=255)
                                                                                                                                                  aaaaaCAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGGGTCCCtt  <  1:1368090/148‑1 (MQ=39)
                                                                                                                                                     |                                                                                                                                                
AATAGTTAATCCACAAACAAACTATTATTATAGGTTGTTTCTAATATTGCGTCAAACTATCTTTAAATATTCGTTAATC‑CTTGATTAGACAATTGTTATATTGAAAATAAATAAACTAAAGAGTCTGGGAC‑ATTAATCCCTAAAAAAAACAGCAGTAAGATAATTTTCAATTAGAAAATATCTTACTGCTGTTCTCTATTTATACAATACTTCGTATTGAATGGCTTCGCTATGCCCATCTGGCACATTACTGTAAAATTCTATAAATAGAATTTTTGATGACGGGTCCCTT  >  CP000730/2478105‑2478396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.