New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 76096 =174 (1.380)8 (0.070) 4/278 6.8 4.6% intergenic (+154/‑980) USA300HOU_0072/USA300HOU_0075 universal stress protein/lysophospholipase
?CP000730 76124 = 168 (1.410)intergenic (+182/‑952) USA300HOU_0072/USA300HOU_0075 universal stress protein/lysophospholipase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 181 total aligned reads displayed.

CCTAAATACTTTCTCACAAATCGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCT  >  CP000730/75977‑76272
                                                                                                                                                    |                                                                                                                                                    
ccTAAATACTTTCTCCCCAAGCGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACaa                                                                                                                                                     <  1:1029711/149‑1 (MQ=255)
ccTAAATACTTTCTCACAAATCGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACaa                                                                                                                                                     <  1:174446/149‑1 (MQ=255)
 cTAAATACTTTCTCACCAATCGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACaaa                                                                                                                                                    <  1:302296/149‑1 (MQ=255)
 cTAAATACTTTCTCACAAATCGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACaaa                                                                                                                                                    >  1:51772/1‑149 (MQ=255)
    aaTACTTTCTCACAAATCGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATA‑CCGAGAATACTAACACAAAGGc                                                                                                                                                 >  2:538605/1‑149 (MQ=255)
     aTACTTTCTCACAAATCGAGAGATTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCa                                                                                                                                                >  1:999691/1‑149 (MQ=255)
     aTACTTTCTCACAAATCGAGAGAGTATTTAGGCTTTTTTTTTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCa                                                                                                                                                >  2:1200422/1‑149 (MQ=255)
     aTACTTTCTCACAAATCGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTCGTAATC‑CAGGGAATACTAACACAAAGGCa                                                                                                                                                <  1:1054878/149‑1 (MQ=255)
     aTACTTTCTCACAAATCGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCa                                                                                                                                                >  2:565483/1‑149 (MQ=255)
     aTACTTTCTCACAAATCGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCa                                                                                                                                                >  2:630035/1‑149 (MQ=255)
     aTACTTTCTCACAAATCGAGAGAGTATGTAGGCTTTTTTTTTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACGAACACAAAGGCa                                                                                                                                                >  2:752916/1‑149 (MQ=255)
      tACTTTCTCACAAATCGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCaa                                                                                                                                               <  2:489317/149‑1 (MQ=255)
          ttCTCACAAATCGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCaattaa                                                                                                                                           <  1:944468/149‑1 (MQ=255)
           tctcACAAATCGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCaattaat                                                                                                                                          <  1:1289451/149‑1 (MQ=255)
                caAATCGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAAttaatttaat                                                                                                                                     >  1:535707/1‑149 (MQ=255)
                  aaTCGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGGAATTAATTtaataa                                                                                                                                   >  1:65652/1‑149 (MQ=255)
                     cGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATta                                                                                                                                <  2:1115550/149‑1 (MQ=255)
                      gagagaGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATtat                                                                                                                               <  2:789315/149‑1 (MQ=255)
                      gagagaGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATtat                                                                                                                               <  1:1232733/149‑1 (MQ=255)
                           agTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCaa                                                                                                                          <  1:372305/149‑1 (MQ=255)
                           agTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCaa                                                                                                                          >  2:824414/1‑149 (MQ=255)
                             tgtttAGGCTTTTGTATTTTTTTAATAAACCTAATGAATTTAATATAACTAATATTGCTGCAACTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCaaaa                                                                                                                        <  2:1340315/147‑1 (MQ=255)
                             tATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCaaaa                                                                                                                        <  1:390144/149‑1 (MQ=255)
                                   ggCTTTTTTTTTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGTTAATACTAACACAAAGGCAATTAATTTAATAATTATAGCATAATATAgg                                                                                                                  >  2:460913/1‑149 (MQ=255)
                                         tctATTCTTTTAATAAACGTAACGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATCTAATAATTATAGCAAAATATAGGTTCTGt                                                                                                            <  1:692989/147‑1 (MQ=255)
                                                ttttAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAg                                                                                                     <  1:919873/149‑1 (MQ=255)
                                                 tttAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGt                                                                                                    <  1:630035/149‑1 (MQ=255)
                                                 tttAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGt                                                                                                    <  1:1200422/149‑1 (MQ=255)
                                                 tttAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGt                                                                                                    <  1:630053/149‑1 (MQ=255)
                                                 tttAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGt                                                                                                    <  2:51772/149‑1 (MQ=255)
                                                  ttAATCAACGTAATGAATTTAAAAGAACTAATATTGCTGCACCTGTATCACCTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGtt                                                                                                   <  2:186179/149‑1 (MQ=255)
                                                  ttAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGtt                                                                                                   <  1:472464/149‑1 (MQ=255)
                                                  ttAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAATGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGtt                                                                                                   <  2:477897/149‑1 (MQ=255)
                                                    aataaACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGa                                                                                                 <  1:263974/149‑1 (MQ=255)
                                                    aataaACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGa                                                                                                 <  2:584842/149‑1 (MQ=255)
                                                      taaACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATCAAGGTTCTGTTGCAAAGTTGAAt                                                                                               >  2:989598/1‑149 (MQ=255)
                                                      taaACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAAt                                                                                               >  2:162103/1‑149 (MQ=255)
                                                      taaACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAAt                                                                                               >  1:794794/1‑149 (MQ=255)
                                                      taaACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGAAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAAt                                                                                               >  2:691366/1‑149 (MQ=255)
                                                          cGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCtat                                                                                           <  1:560270/149‑1 (MQ=255)
                                                          cGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCtat                                                                                           <  2:575534/149‑1 (MQ=255)
                                                           gTAATGAATTTAATATAACTCATATTGCTGCACCCGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAAGTATATCAAAATATAGGTTCTGTTGCAAAGTTGAATCtata                                                                                          <  1:320144/149‑1 (MQ=255)
                                                            tAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAg                                                                                         >  2:182344/1‑149 (MQ=255)
                                                               tGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCACAATATACGTTCTGTTGCAAAGTTGAATCTATAGtaa                                                                                      >  2:868019/1‑148 (MQ=255)
                                                                        tataACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAAc                                                                             >  1:1204406/1‑149 (MQ=255)
                                                                        tataACTAATATTGCTGCACCTGTATCACATAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAAc                                                                             <  1:349585/149‑1 (MQ=255)
                                                                           aaCTAATATTGCTGCACGTGTATCACTTAGAACAGCTAAACACTGAAGATGTAATCACAGGGTA‑ACGAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGGTCTGTTGCAAAGTTGAATCTATAGTGTAATTTGAGCaaa                                                                          >  1:983403/1‑149 (MQ=255)
                                                                            aCTAATAATGCTGCACCTGTAACACTTAGAACAGCTAACCAAAGTGTTAGTAATA‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATaaaaataaaaaaa                                                                         <  2:388394/149‑12 (MQ=255)
                                                                             cTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACaaaaa                                                                        >  1:839034/1‑149 (MQ=255)
                                                                             cTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACaaaaa                                                                        >  2:1090776/1‑149 (MQ=255)
                                                                               aaTATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACaaaaaag                                                                      >  2:1174355/1‑147 (MQ=255)
                                                                                   ttGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGtc                                                                  >  1:393894/1‑149 (MQ=255)
                                                                                    tgctgcACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGtct                                                                 >  1:1160629/1‑149 (MQ=255)
                                                                                    tgctgcACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGGTGAACCTATAGTATAATTTTAACAAAAAGGAGtct                                                                 >  1:202892/1‑149 (MQ=255)
                                                                                      ctgcACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGtcttc                                                               >  1:646493/1‑149 (MQ=255)
                                                                                        gcACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAGAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTg                                                             <  2:821390/149‑1 (MQ=255)
                                                                                        gcACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTg                                                             <  1:824414/149‑1 (MQ=255)
                                                                                        gcACCAGTATCACATAAAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCGAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTg                                                             <  1:583467/149‑1 (MQ=255)
                                                                                              tgaTCACCTAGAACAGCTAACCAAAATGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTATGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGaa                                                       <  2:366129/147‑1 (MQ=255)
                                                                                              gTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGaa                                                       <  1:110256/149‑1 (MQ=255)
                                                                                              gTATCACTTAGAACAACTAAAAAAAATGTAAGTAATC‑CTGGGAATACTAACAAAAAGGAAATGAATTTAATAATTATAGAAAAATATAGGTTCTGTTGGAAAGTTGATTCTATAGTAAAAAAAAAAAAAAAAGGAGTCTTCTGTATGaa                                                       <  2:320918/149‑1 (MQ=255)
                                                                                               tATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATTGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTGTAACAAAAAGGAGTCTTCTGTATGAAc                                                      <  1:1002274/149‑1 (MQ=255)
                                                                                               tATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAAc                                                      <  1:775683/149‑1 (MQ=255)
                                                                                                   aCTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCAGTATGAACTAtt                                                  >  2:692546/1‑149 (MQ=255)
                                                                                                     ttAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTc                                                >  1:715098/1‑149 (MQ=255)
                                                                                                       aGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAg                                              <  1:1128975/149‑1 (MQ=255)
                                                                                                        gAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGa                                             >  2:60693/1‑149 (MQ=255)
                                                                                                         ctcAGCTAACCACAGTGTTTCATGCC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGat                                            >  2:1303805/3‑149 (MQ=25)
                                                                                                         caCAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATCTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGat                                            >  2:259662/2‑149 (MQ=255)
                                                                                                         aaCAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGat                                            >  1:840605/1‑149 (MQ=255)
                                                                                                         aaCAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGat                                            >  2:105156/1‑149 (MQ=255)
                                                                                                         aaCAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCAGTATAAACTATTTAAGat                                            >  1:450665/1‑149 (MQ=255)
                                                                                                              caaaCCAAAATGTTAGTAATC‑CAGGGAATACTAACACAAAGTCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATaaa                                       <  2:439288/147‑1 (MQ=255)
                                                                                                              cTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATaaa                                       >  1:735403/1‑149 (MQ=255)
                                                                                                              cTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTATGTATGAACTATTTCAGATATaaa                                       >  1:1084786/1‑149 (MQ=255)
                                                                                                                   cAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAAtt                                  >  2:354428/1‑149 (MQ=255)
                                                                                                                    aaaGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAAttt                                 >  1:726268/1‑149 (MQ=255)
                                                                                                                     aaGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTa                                <  1:1083587/149‑1 (MQ=255)
                                                                                                                     aaGTGTCAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTa                                <  1:551750/149‑1 (MQ=255)
                                                                                                                         tttAGTAAAC‑CAGGGAATAATAAGACAAAAGAAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGTATCTATAGTAAAAAAAAAAAAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACaa                            <  2:775384/148‑1 (MQ=21)
                                                                                                                         gtTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACaa                            >  2:910509/1‑149 (MQ=255)
                                                                                                                           tAGTAATC‑CAGGGAATACTAACATAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAgg                          >  1:995920/1‑149 (MQ=255)
                                                                                                                           tAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACaacg                          >  1:1343483/1‑147 (MQ=255)
                                                                                                                           tAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTATTCTGTATGAACTATTTCAGATATAAACAATTTAGCAAgg                          >  1:1343482/1‑149 (MQ=255)
                                                                                                                            aGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGa                         <  2:535707/149‑1 (MQ=255)
                                                                                                                             gTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGAt                        >  2:201842/1‑149 (MQ=255)
                                                                                                                              tAATC‑CAGGGAATACTAACACAACGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATg                       >  1:994460/1‑149 (MQ=255)
                                                                                                                              tAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATg                       >  1:876396/1‑149 (MQ=255)
                                                                                                                              tAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATg                       <  1:1257923/149‑1 (MQ=255)
                                                                                                                                    cAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATc                  >  2:582314/1‑149 (MQ=255)
                                                                                                                                     aGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAACTATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCATCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTAtta                 >  1:967082/1‑147 (MQ=255)
                                                                                                                                     aGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCa                 >  2:935738/1‑149 (MQ=255)
                                                                                                                                       ggAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTCGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACt               >  1:850551/1‑149 (MQ=255)
                                                                                                                                         aaTACTAACACAAAGGCAATTAATTTAATAATTAGAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGt             <  1:526912/149‑1 (MQ=255)
                                                                                                                                             atAACACAAAAGCAAATAATTTAATAAATATAGAAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTAAAAAAAAAAAAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGcc         <  2:1192571/148‑1 (MQ=17)
                                                                                                                                              tAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATTTTATCACTGTCGcct        >  1:1001843/1‑148 (MQ=255)
                                                                                                                                                 cacaAAGGCGAGTAATTTAATACTTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTg     <  1:303573/149‑1 (MQ=255)
                                                                                                                                                 cacaAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTg     <  1:960335/149‑1 (MQ=255)
                                                                                                                                                 aacaAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTg     <  1:1064796/148‑1 (MQ=255)
                                                                                                                                                    aaaGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGct  <  1:182344/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CCTAAATACTTTCTCACAAATCGAGAGAGTATTTAGGCTTTTTTATTTTTTTAATAAACGTAATGAATTTAATATAACTAATATTGCTGCACCTGTATCACTTAGAACAGCTAACCAAAGTGTTAGTAATC‑CAGGGAATACTAACACAAAGGCAATTAATTTAATAATTATAGCAAAATATAGGTTCTGTTGCAAAGTTGAATCTATAGTATAATTTTAACAAAAAGGAGTCTTCTGTATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCT  >  CP000730/75977‑76272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.