BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 848580	138 (1.090)	7 (0.060) +CTGAAAAAAAAAAA	5/268	6.2	5.1%	coding (101/312 nt)	USA300HOU_0793	hypothetical protein
*	?	CP000730	2665075 =	151 (1.190)	7 (0.060) +CTGAAAAAAAAAAA	5/268	6.2	5.1%	intergenic (+310/‑168)	pat/USA300HOU_2519	acetyltransferase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 151 total aligned reads displayed.

TGTACTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATAGCTTTGATTTAACGCTTTTTCTCA  >  CP000730/2664931‑2665218

tgtACTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCaaaaa                                                                                                                                             >  1:272195/1‑149 (MQ=255)

  tACTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGATTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGc                                                                                                                                           <  2:803933/149‑1 (MQ=255)

  tACTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGc                                                                                                                                           <  1:20375/149‑1 (MQ=255)

  tACTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGc                                                                                                                                           <  1:762631/149‑1 (MQ=255)

  tACTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGc                                                                                                                                           <  2:1103215/149‑1 (MQ=255)

             aGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAgc                                                                                                                                <  2:1218603/149‑1 (MQ=255)

             aGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAgc                                                                                                                                <  1:616987/149‑1 (MQ=255)

             aGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAgc                                                                                                                                <  2:680948/149‑1 (MQ=255)

             aGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAgc                                                                                                                                >  1:275929/1‑149 (MQ=255)

             aGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTAAGGACCAAAAAGCTTGTTACAAgc                                                                                                                                <  2:187309/149‑1 (MQ=255)

              ggAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTGGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAcgcg                                                                                                                               >  1:405147/1‑149 (MQ=255)

              ggAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAgcg                                                                                                                               >  1:541201/1‑149 (MQ=255)

              ggAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAgcg                                                                                                                               <  2:343420/149‑1 (MQ=255)

                  tACATGAGTAAAACTCATGCATAAGAAATGCTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCAtt                                                                                                                           >  1:688336/1‑149 (MQ=255)

                      tGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCg                                                                                                                       >  1:355069/1‑149 (MQ=255)

                       gAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTCTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGt                                                                                                                      <  1:391638/149‑1 (MQ=255)

                         gTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTc                                                                                                                    >  1:1091142/1‑149 (MQ=255)

                         gTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTc                                                                                                                    <  2:1256748/149‑1 (MQ=255)

                         gTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTc                                                                                                                    >  1:1125729/1‑149 (MQ=255)

                           aaaaCTCATGCATAAGAAATACTAATTTGTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAATCTTGTTACAAGCGCATTTTCGTTCAg                                                                                                                  >  1:818581/1‑149 (MQ=255)

                              aatCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCa                                                                                                               <  1:89295/147‑1 (MQ=255)

                              aCTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTCCAAGCGCATTTTCGTTCAGTCa                                                                                                               >  1:606205/1‑149 (MQ=255)

                              aCTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCa                                                                                                               >  1:639495/1‑149 (MQ=255)

                               cTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCaa                                                                                                              >  2:1200997/1‑149 (MQ=255)

                                tCATGCATAAGCAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAac                                                                                                             <  1:468016/149‑1 (MQ=255)

                                 cATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAact                                                                                                            >  2:1066198/1‑149 (MQ=255)

                                       tAAGAAATACTAATTTCTATAGAAAAAGTAGTTCTTTACCGTCGTCCCACCCCACCTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGcc                                                                                                      <  2:722203/149‑1 (MQ=255)

                                        aaGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCa                                                                                                     <  2:1297828/149‑1 (MQ=255)

                                            aacaCTAATTTCTATAGAAAAAGGATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAatat                                                                                                 <  2:447978/146‑1 (MQ=255)

                                            aaTACTAATTTCTATAGAACACGTACTGCCTGATCGTCGACCCACTGC‑TCTCGGCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAatat                                                                                                 <  1:970253/149‑1 (MQ=25)

                                            aaTACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAatat                                                                                                 <  1:445886/149‑1 (MQ=255)

                                            aaTACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAatat                                                                                                 <  1:660400/149‑1 (MQ=255)

                                               aCTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAAc                                                                                              >  1:757936/1‑149 (MQ=255)

                                               aCTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAAc                                                                                              >  1:209884/1‑149 (MQ=255)

                                                cTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACt                                                                                             <  2:171564/149‑1 (MQ=255)

                                                   aTTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTg                                                                                          <  2:579158/149‑1 (MQ=255)

                                                     ttCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTa                                                                                        >  1:443547/1‑149 (MQ=255)

                                                        tataGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTagag                                                                                     <  2:52397/149‑1 (MQ=255)

                                                        aataGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTagag                                                                                     <  2:787960/148‑1 (MQ=255)

                                                         ataGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGc                                                                                    <  2:1176732/149‑1 (MQ=255)

                                                         ataGAAAAAGTATTTCTTTATCGTCGTCCCACCACAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGGCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGc                                                                                    <  1:687345/149‑1 (MQ=255)

                                                         ataGAAAAAGGTTTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGc                                                                                    <  2:67886/149‑1 (MQ=255)

                                                          taGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAACTTGTTAAAAGCGCATTTTCGTTCCGTCAAATACTACCAAGAGCACTTTGGAGATCa                                                                                   >  2:922630/1‑149 (MQ=21)

                                                           aaaaaaaGGATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCat                                                                                  <  2:190887/147‑1 (MQ=255)

                                                           aGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCat                                                                                  >  1:80065/1‑149 (MQ=255)

                                                           aGAAAAAGTATTTCTATATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCat                                                                                  <  1:835883/149‑1 (MQ=255)

                                                            gAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCata                                                                                 >  1:1217065/1‑149 (MQ=255)

                                                            gAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCata                                                                                 >  1:119020/1‑149 (MQ=255)

                                                             aaaaaGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGGCTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCatat                                                                                >  1:717476/1‑149 (MQ=255)

                                                             aaaaaGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAANCGCATTTTCGTTCAGTCAACTACTGCCAANATAACTATGTAGAGCatat                                                                                >  1:1229612/1‑149 (MQ=255)

                                                             aaaaaGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTTCCAATATAACTTTGTAGGGCatat                                                                                >  2:1317254/1‑149 (MQ=255)

                                                              aaaaGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATAtt                                                                               >  1:505060/1‑149 (MQ=255)

                                                                aaGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTGGTAGAGCATATTAc                                                                             >  2:1329775/1‑149 (MQ=255)

                                                                aaGTATTTCTTTAGCGTCGTCCCACCCCAACTC‑CCGCATTTTTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTAc                                                                             <  2:731166/149‑1 (MQ=255)

                                                                 aGTATTTCTTTATCGTCGTCCCACCCCAGCTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCACAAAGCTTGTTACAAGCGAATTTGCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATTTTAct                                                                            >  2:458915/1‑148 (MQ=37)

                                                                 aGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCCGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACTAGCGCATTTTCGTTCAGTTAACTACTGCCAATATAACTTTGTAGAGCATATTACa                                                                            >  2:1142987/1‑149 (MQ=255)

                                                                 aGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACa                                                                            >  1:1151564/1‑149 (MQ=255)

                                                                     tttCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGa                                                                        <  1:1040811/149‑1 (MQ=255)

                                                                      ttCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTGAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAAGATAACTTTGTAGAGCATATTACATTgct                                                                       >  2:854819/1‑147 (MQ=255)

                                                                      ttCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTAAATTGAt                                                                       >  2:194385/1‑149 (MQ=255)

                                                                        cTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCCATGTAACTGTGTAGAGCATATTACATTGAttt                                                                     >  2:606182/1‑149 (MQ=255)

                                                                        cTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTAAGTCAACTACTGCAAAACGAACTTTGTAGAGCATATTACATTGAttt                                                                     >  2:606329/1‑149 (MQ=37)

                                                                         tttATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTa                                                                    <  1:586455/149‑1 (MQ=255)

                                                                         tttATCGTCGTCCCACCCCAACTC‑ACACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTa                                                                    >  1:665776/1‑149 (MQ=255)

                                                                           tATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACa                                                                  >  1:1087523/1‑149 (MQ=255)

                                                                             tcgtcgTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTCCAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTATAGAGCATATTACATTGGTTTACAtt                                                                >  1:639234/1‑149 (MQ=255)

                                                                             tcgtcgTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACAtt                                                                >  2:171418/1‑149 (MQ=255)

                                                                                  ctcCCACCCCAACCC‑GGACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTccc                                                           <  2:696958/148‑1 (MQ=255)

                                                                                   tcCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCt                                                          <  1:30058/149‑1 (MQ=255)

                                                                                   tcCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCt                                                          <  1:82460/149‑1 (MQ=255)

                                                                                   ccccACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCt                                                          <  1:1285155/148‑1 (MQ=255)

                                                                                    cccACCCCAACTC‑GCACATTATTGTAAGCTGACTTTCCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGTCAATATAACTTTGTAGAGCATCTTACATTGATTTACATTGTCCCtt                                                         <  1:746574/149‑1 (MQ=255)

                                                                                    cccACCCCAACCC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCtt                                                         <  1:4104/149‑1 (MQ=255)

                                                                                            aaCTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTttatttat                                                 >  2:271124/1‑149 (MQ=255)

                                                                                              cTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTc                                               <  1:1044476/149‑1 (MQ=255)

                                                                                              cTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTc                                               <  1:90674/149‑1 (MQ=255)

                                                                                                c‑GCACATTAAAATAAGCGGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTAATTTATTCtt                                             >  2:822647/1‑149 (MQ=25)

                                                                                                  gCACATTATTGTAAGATGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTAGTTCAGTCCACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCACTTTTATTTATTCttt                                            >  2:476360/1‑149 (MQ=255)

                                                                                                      attattGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTCACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTTCATTGTCCCTTTTATTTATTCTTTTCaa                                        <  1:841970/149‑1 (MQ=255)

                                                                                                       ttattGTAAACTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATATTCAGTTTCCCTTTTATTTATTTTTTTGaaa                                       >  2:278515/1‑149 (MQ=25)

                                                                                                        tattTTAAGCTGACTTTTCGTCAGCTTCTGTATAGAAGCCAAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAAt                                      <  2:28239/149‑1 (MQ=25)

                                                                                                           tGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACt                                   >  2:206461/1‑149 (MQ=255)

                                                                                                             tAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTAAACTACTGCCAATATAACTTTGTAGAGCAAATTACATAGAATTACATTGTCCCTTTTATTTATTCTTTTCAAATACTAt                                 >  1:305953/1‑149 (MQ=255)

                                                                                                                gCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATccc                              >  2:694808/1‑149 (MQ=255)

                                                                                                                  tGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCa                            >  1:387168/1‑149 (MQ=255)

                                                                                                                     cTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTGCAAGCGCTTTTTCGTTCAGTCAACTACTGCCAATATAACTTTGGAGAGCAGATTACATTGTTTTGCATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATaa                         >  2:632286/1‑148 (MQ=37)

                                                                                                                     cTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATAg                         >  2:1056553/1‑149 (MQ=255)

                                                                                                                         tCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATAGCttt                     >  2:858258/1‑149 (MQ=255)

                                                                                                                             cAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATAGCTTTGAtt                 >  2:79191/1‑149 (MQ=255)

                                                                                                                                cTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATAGCTTTGCTTTaa              >  1:241171/1‑149 (MQ=255)

                                                                                                                                  tCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATGGCTTTGATTTAACg            >  1:1197670/1‑149 (MQ=255)

                                                                                                                                     gtgtTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATAGCTTTGATTTAACGCtt         <  2:1091142/149‑1 (MQ=255)

                                                                                                                                       gtTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATAGCTTTGATTTAACGCtttt       <  2:505060/149‑1 (MQ=255)

                                                                                                                                         tGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATAGCTTTGATTTAACGCTTTTtc     >  2:353932/1‑149 (MQ=255)

                                                                                                                                          ggggCCCAAAAATCTTGTTACAAGCGCATTTTCGTTCACTCAACTCCTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATAGTCCCTTTTATTTATTCTTTTCAAATACTCTCCCCATAGCTTTGATTTAACGCTTTTtct    <  2:639234/149‑1 (MQ=37)

                                                                                                                                          ggggCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATAGCTTTGATTTAACGCTTTTtct    <  1:1276168/149‑1 (MQ=255)

                                                                                                                                          ggggCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATAGCTTTGATTTAACGCTTTTtct    <  1:978522/149‑1 (MQ=255)

                                                                                                                                          ggggCCCAAAAAGCTTGTCACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATAGCTTTGATTTAACGCTTTTtct    <  1:353668/149‑1 (MQ=255)

                                                                                                                                            ggCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATAGCTTTGATTTAACGCTTTTTCTCa  >  2:239821/1‑149 (MQ=255)

                                                                                                                                            ggCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATAGCTTTGATTTAACGCTTTTTCTCa  >  1:249911/1‑149 (MQ=255)

TGTACTTAAAAATAGGAATACATGAGTAAAACTCATGCATAAGAAATACTAATTTCTATAGAAAAAGTATTTCTTTATCGTCGTCCCACCCCAACTC‑GCACATTATTGTAAGCTGACTTTTCGTCAGCTTCTGTGTTGGGGCCCAAAAAGCTTGTTACAAGCGCATTTTCGTTCAGTCAACTACTGCCAATATAACTTTGTAGAGCATATTACATTGATTTACATTGTCCCTTTTATTTATTCTTTTCAAATACTATCCCCATAGCTTTGATTTAACGCTTTTTCTCA  >  CP000730/2664931‑2665218

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.