Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	899273	899438	166	2 [1]	[1] 2	USA300HOU_0854	bacteriophage repressor

CAAAATTACCTAAAGATTTCCCATCATCAATTGGTATCTCTTTGTTTTCAATAACCATCTTTTCGTATAAATACATGCAATAACCCCTTACTGATTTCGATGTGCTTTTCTAACTAACTCCGCATACTTTCTAATTTCAATTAATTCTTCCTCTGTAAAATCTCCATCTAAGTGCGCGGCGATAGTATCTTGTTTTGTAGATTCTTCGCGTTCAGCAAATC  >  CP000730/899132‑899352                                                                                                                                             |                                                                                 cAAAATTACCTAAAGATTTCCCATCATCAATTGGTATCTCTTTGTTTTCAATAACCATCTTTTCGTATAAATACATGCAATAACCCCTTACTGATTTCGATGTGCTTTTCTAACTAACTCCGCATACTTTCTAATTTCaat                                                                                  >  1:52464/1‑141 (MQ=255)                                                                                 tAACCCCTTACTGATTTCGATGTGCTTTTCTAACTAACTCCGCATACTTTCTAATTTCAATTAATTCTTCCTCTGTAAAATCTCCATCTAAGTGCGCGGCGATAGTATCTTGTTTTGTAGATTCTTCGCGTTCAGCAAATc  >  1:21960/1‑141 (MQ=255)                                                                                                                                             |                                                                                 CAAAATTACCTAAAGATTTCCCATCATCAATTGGTATCTCTTTGTTTTCAATAACCATCTTTTCGTATAAATACATGCAATAACCCCTTACTGATTTCGATGTGCTTTTCTAACTAACTCCGCATACTTTCTAATTTCAATTAATTCTTCCTCTGTAAAATCTCCATCTAAGTGCGCGGCGATAGTATCTTGTTTTGTAGATTCTTCGCGTTCAGCAAATC  >  CP000730/899132‑899352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑