New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 2545705 =105 (1.060)3 (0.030) 3/234 NT 3.3% intergenic (+6/+46) hlgB/USA300HOU_2406 gamma hemolysin component B/hypothetical membrane protein
?CP000730 2545745 = 78 (0.870)intergenic (+46/+6) hlgB/USA300HOU_2406 gamma hemolysin component B/hypothetical membrane protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 112 total aligned reads displayed.

TTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAATTTAAAATAATAGATAAT  >  CP000730/2545605‑2545883
                                                                                                                                             |                                                                                                                                          
ttAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGTCCGTGTTTTg                                                                                                                                            <  2:93616/141‑1 (MQ=255)
  aaaaCTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGAt                                                                                                                                          <  1:86277/141‑1 (MQ=255)
   aaaCTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGAtt                                                                                                                                         >  1:1026548/1‑141 (MQ=255)
   aaaCTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGAtt                                                                                                                                         >  1:863452/1‑141 (MQ=255)
   aaaCTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGAtt                                                                                                                                         >  1:187217/1‑141 (MQ=255)
    aaCTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGAttt                                                                                                                                        >  1:1029731/1‑141 (MQ=255)
    aaCTAGAACATTCAAATCAACATAGGAAATTGATTGGGAAAATCACAAAGTGAAATTGTGAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGAgtt                                                                                                                                        >  2:113448/1‑141 (MQ=255)
     aCTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATtta                                                                                                                                       >  2:1111845/1‑141 (MQ=255)
         gAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTtattat                                                                                                                                   >  2:808469/1‑141 (MQ=255)
                  aaTCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAAt                                                                                                                          >  2:754033/1‑141 (MQ=255)
                     cAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACt                                                                                                                       <  2:757868/141‑1 (MQ=255)
                      aaCATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTg                                                                                                                      <  1:520463/141‑1 (MQ=255)
                      aaCATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGGGTATTGATTTATTATCTTAGTAATACta                                                                                                                      >  2:877079/1‑140 (MQ=255)
                       aCATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGc                                                                                                                     >  2:770741/1‑141 (MQ=255)
                        cATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGCAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGCTTTGATTTATTATCTTAGTTATACTGcc                                                                                                                    >  2:253427/1‑141 (MQ=255)
                        cATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGcc                                                                                                                    <  2:473421/141‑1 (MQ=255)
                        cATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGcc                                                                                                                    <  1:33652/141‑1 (MQ=255)
                          tatGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCAt                                                                                                                  >  2:1086734/1‑141 (MQ=255)
                          tatGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATCGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCAt                                                                                                                  >  1:939414/1‑141 (MQ=255)
                          tatGAAATTGATTGGGAAAAGAACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCAt                                                                                                                  <  1:1118480/141‑1 (MQ=255)
                           catatgttgattgGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGACGCCAACAGCAATTGT‑GACGACCGAGTTTTGATTTATTAGCGTAGTAATACTGCCAtt                                                                                                                 >  2:507175/7‑141 (MQ=255)
                            tGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTc                                                                                                                <  2:169209/141‑1 (MQ=255)
                             gAAAATGATTGAGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCt                                                                                                               <  2:352229/141‑1 (MQ=255)
                               aaTTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCttt                                                                                                             >  2:474485/1‑141 (MQ=255)
                                  tgattgGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTtc                                                                                                          <  2:515685/141‑1 (MQ=255)
                                  tgattgGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTtc                                                                                                          <  2:715294/141‑1 (MQ=255)
                                   gattgGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTtct                                                                                                         <  2:165284/141‑1 (MQ=255)
                                   attgtagctattcctttatatctcacattgagaaaaagaatggcagtattactaagataataaatcaaaacacggtcgccaacagtaattgtgacgaccgtgttttGATTTATTATCTTAGTAATACTGCCa                                                                                                                   <  2:171094‑M2/26‑1 (MQ=255)
                                   attgtagctattcctttatatctcacattgagaaaaagaatggcagtattactaagataataaatcaaaacacggtcgccaacagtaattgtgacgaccgtgttttGATTTATTATCTTAGTAATACTGCCa                                                                                                                   >  1:171094‑M2/107‑132 (MQ=255)
                                      tgGGAAAATCACAGAGTGAAATTGTTAGATACGAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGCCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTCTTATCTTAGTAATACTGCCATTCTTTTTCTCaa                                                                                                      >  2:432424/1‑141 (MQ=255)
                                        ggAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAAtg                                                                                                    >  1:736611/1‑141 (MQ=255)
                                           aaaTCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTga                                                                                                 >  2:1044225/1‑141 (MQ=255)
                                           aaaTCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTga                                                                                                 <  1:560364/141‑1 (MQ=255)
                                            aaTCACAAAGTGAAATTGTTAGATACAAAAGAATCTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTgag                                                                                                <  2:364931/141‑1 (MQ=255)
                                              tCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGat                                                                                              <  2:342166/141‑1 (MQ=255)
                                                ctttatatctcacattgagaaaaagaatggcagtattactaagataataaatcaaaacacggtcgccaacagtaattgtgacgaccgtgttttGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGata                                                                                             <  1:485778‑M2/48‑1 (MQ=255)
                                                 caAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGAtata                                                                                           <  1:996549/141‑1 (MQ=255)
                                                 caAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGAtata                                                                                           <  2:924419/141‑1 (MQ=255)
                                                 caAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAAGACTGCCATTCTTTTTCTCAATGTGAGAtata                                                                                           <  2:72203/141‑1 (MQ=255)
                                                  aaaGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATaa                                                                                          >  1:901985/1‑141 (MQ=255)
                                                  aaaGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATaa                                                                                          >  1:77012/1‑141 (MQ=255)
                                                    tatctcacattgagaaaaagaatggcagtattactaagataataaatcAAAACACGGTCGTCA‑CAATTACTGTTGGCGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAg                                                                                        <  1:485778‑M1/93‑1 (MQ=255)
                                                    aGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAg                                                                                        <  2:187217/141‑1 (MQ=255)
                                                       gAAATTGTTAGATACAAAAGAAACTGAAAACAATCAATAGCTAGTAAAACTCGGTCGCCAACAGTAATTGT‑GACTACCGTATTTTGATTTATTATCTTAGTAATACTGCCATCCTTTTTCTCAATGTGGGATATAAAGGaa                                                                                     <  2:1023218/141‑1 (MQ=255)
                                                          aTTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAg                                                                                  >  1:896773/1‑141 (MQ=255)
                                                              ttAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTAc                                                                              <  2:304994/141‑1 (MQ=255)
                                                                aGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACaa                                                                            <  1:650811/141‑1 (MQ=255)
                                                                  aTACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAAtt                                                                          <  1:658763/141‑1 (MQ=255)
                                                                      aaaaGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAg                                                                      <  2:1002855/141‑1 (MQ=255)
                                                                       aaaGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGt                                                                     <  1:853391/141‑1 (MQ=255)
                                                                        aaGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTg                                                                    <  1:265837/141‑1 (MQ=255)
                                                                         aGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGa                                                                   >  2:23287/1‑141 (MQ=255)
                                                                          tggcagtattactaagataataaatcAAAACACGGTCGTCACAATTACTGTT‑GGCGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAAt                                                                           <  2:171094‑M1/106‑1 (MQ=255)
                                                                          tggcagtattactaagataataaatcAAAACACGGTCGTCA‑CAATTACTGTTGGCGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAAt                                                                           >  1:171094‑M1/27‑132 (MQ=255)
                                                                          gAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGaa                                                                  >  1:665560/1‑141 (MQ=255)
                                                                             aCTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAatat                                                               >  1:82819/1‑141 (MQ=255)
                                                                                 aaaaCAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACg                                                           >  2:630533/1‑141 (MQ=255)
                                                                                 aaaaCAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATAGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACg                                                           >  2:874775/1‑141 (MQ=255)
                                                                                    aCAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCt                                                        <  1:901966/141‑1 (MQ=255)
                                                                                      aataaataGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTgg                                                      >  1:830602/1‑141 (MQ=255)
                                                                                       ataaataGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGa                                                     <  2:1102753/141‑1 (MQ=255)
                                                                                        taaataGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGaa                                                    >  1:19067/1‑141 (MQ=255)
                                                                                         aaataGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAAt                                                   <  1:219744/141‑1 (MQ=255)
                                                                                          aataGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATc                                                  >  1:833478/1‑141 (MQ=255)
                                                                                          aataGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATc                                                  <  2:1029731/141‑1 (MQ=255)
                                                                                          aataGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATc                                                  >  1:254250/1‑141 (MQ=255)
                                                                                            taGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTCTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATcgc                                                >  1:1150859/1‑141 (MQ=255)
                                                                                             aGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATcgcg                                               <  1:398957/141‑1 (MQ=255)
                                                                                              gCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGt                                              >  2:764659/1‑141 (MQ=255)
                                                                                              gCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGt                                              <  1:814815/141‑1 (MQ=255)
                                                                                                tAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGttt                                            >  2:1065970/1‑141 (MQ=255)
                                                                                                  gTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTaa                                          <  2:244502/141‑1 (MQ=255)
                                                                                                   tAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTaac                                         <  1:571930/141‑1 (MQ=255)
                                                                                                   tAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTaac                                         <  2:484764/141‑1 (MQ=255)
                                                                                                    AAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTaaca                                        <  2:882133‑M1/141‑1 (MQ=255)
                                                                                                        CACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAacac                                    <  2:795817‑M1/141‑1 (MQ=255)
                                                                                                          CGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTa                                  >  1:201427‑M1/1‑141 (MQ=255)
                                                                                                            GTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTAcc                                >  1:808469‑M1/1‑141 (MQ=255)
                                                                                                                ccAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCcaca                            >  2:129397/1‑141 (MQ=255)
                                                                                                                 cAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCcacac                           >  1:1148205/1‑141 (MQ=255)
                                                                                                                    cAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAgg                        >  2:796787/1‑141 (MQ=255)
                                                                                                                     aGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGt                       <  1:205741/141‑1 (MQ=255)
                                                                                                                     aGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGt                       <  1:791715/141‑1 (MQ=255)
                                                                                                                      gTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTa                      <  2:586802/141‑1 (MQ=255)
                                                                                                                          ttGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAAtt                  <  1:486670/141‑1 (MQ=255)
                                                                                                                          ttGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAAtt                  <  2:362179/141‑1 (MQ=255)
                                                                                                                           tgt‑gACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAAttt                 <  1:960684/141‑1 (MQ=255)
                                                                                                                           tgt‑gACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAAttt                 >  1:241609/1‑141 (MQ=255)
                                                                                                                           tgt‑gACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAAttt                 <  2:61813/141‑1 (MQ=255)
                                                                                                                             t‑gACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAATTTaa               <  1:748028/141‑1 (MQ=255)
                                                                                                                               gacgacCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAATTTaaa              >  1:630766/1‑141 (MQ=255)
                                                                                                                                acgacCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTTTTTTTTTTTTTTATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAATTTaaaa             >  2:204049/1‑141 (MQ=255)
                                                                                                                                 cgtccgtgttttGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACGATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAATTTAAaat            <  1:845118‑M2/129‑1 (MQ=255)
                                                                                                                                 cgtccgtgttttGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAATTTAAaat            <  1:844989‑M2/129‑1 (MQ=255)
                                                                                                                                 cgaccgtgttttGATTTATTATCTTAGTAATACTGCCATCCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACATGTAAATTTAAaat            <  1:881159‑M2/129‑1 (MQ=255)
                                                                                                                                   accgtgttttGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAATTTAAaataa          >  1:167745‑M2/11‑141 (MQ=255)
                                                                                                                                        gttttGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAATTTAAAataatagat     <  2:830602‑M2/136‑1 (MQ=255)
                                                                                                                                          tttGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAATTTAAAataatagataa   >  1:151696‑M2/4‑141 (MQ=255)
                                                                                                                                          tttGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAATTTAAAataatagataa   <  1:386908‑M2/138‑1 (MQ=255)
                                                                                                                                          tttGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAATTTAAAataatagataa   >  2:613183‑M2/4‑141 (MQ=255)
                                                                                                                                             |                                                                                                                                          
TTAAAACTAGAACATTTAAATCAACATATGAAATTGATTGGGAAAATCACAAAGTGAAATTGTTAGATACAAAAGAAACTGAAAACAATAAATAGCTAGTAAAACACGGTCGCCAACAGTAATTGT‑GACGACCGTGTTTTGATTTATTATCTTAGTAATACTGCCATTCTTTTTCTCAATGTGAGATATAAAGGAATAGCTACAATTAAAGTGAATATTACGCCTGGAATCGCGTTTAACAACACTACCCACACAGGTAAATTTAAAATAATAGATAAT  >  CP000730/2545605‑2545883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.