BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2793464 =	132 (1.330)	3 (0.030)	3/238	NT	2.5%	coding (2179/2982 nt)	pip	possible bacteriophage infection protein
*	?	CP000730	2793513 =	111 (1.210)	3 (0.030)	3/238	NT	2.5%	coding (2130/2982 nt)	pip	possible bacteriophage infection protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 141 total aligned reads displayed.

ATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGCACAAAGTTAGCAGCTTTAGCTACATC  >  CP000730/2793374‑2793650

gaacagcgattaactaatgcgacagcaagtgtgaataaaaatttaccaacgttattaaatggttatgatcaagcggtaggattactaaatAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTtttat                                                                                                                                          >  1:904817‑M1/91‑141 (MQ=255)

aTTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTtttat                                                                                                                                          <  1:164770/141‑1 (MQ=255)

  ttGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTtttattt                                                                                                                                        >  2:501909/1‑141 (MQ=255)

  ttGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTtttattt                                                                                                                                        >  1:985619/1‑141 (MQ=255)

  ttGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTtttattt                                                                                                                                        >  1:1178935/1‑141 (MQ=255)

  ttGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATAAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTtttattt                                                                                                                                        >  1:12110/1‑141 (MQ=255)

   tGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTtttattta                                                                                                                                       >  1:111676/1‑141 (MQ=255)

    gTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAg                                                                                                                                      >  2:1076060/1‑141 (MQ=255)

     tCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGt                                                                                                                                     <  1:879678/141‑1 (MQ=255)

        aCTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAAt                                                                                                                                  <  1:753183/141‑1 (MQ=255)

          tGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTTTCTTGTTGCTGATTTTTATTTAGTAATcc                                                                                                                                >  2:395930/1‑141 (MQ=255)

           gCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCt                                                                                                                               <  2:1058415/141‑1 (MQ=255)

           gCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCt                                                                                                                               <  1:409038/141‑1 (MQ=255)

           gCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCt                                                                                                                               <  1:924810/141‑1 (MQ=255)

               catcTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTAccc                                                                                                                           >  2:873327/1‑140 (MQ=255)

                 tcTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCt                                                                                                                         <  2:141197/141‑1 (MQ=255)

                     tGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTTAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGAt                                                                                                                     >  2:37844/1‑141 (MQ=255)

                        cTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCAt                                                                                                                  <  2:629503/141‑1 (MQ=255)

                         tAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTATCGCTTGATCATa                                                                                                                 >  2:1054195/1‑141 (MQ=255)

                          aaTTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTTTTTCGTTGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATaa                                                                                                                >  2:947969/1‑141 (MQ=255)

                           aTTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAAc                                                                                                               >  1:747968/1‑141 (MQ=255)

                            tttCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAAcc                                                                                                              <  2:577721/141‑1 (MQ=255)

                             ttCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCa                                                                                                             <  2:54625/141‑1 (MQ=255)

                                ttGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCAttt                                                                                                          <  1:609152/141‑1 (MQ=255)

                                 tGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTta                                                                                                         >  1:178565/1‑141 (MQ=255)

                                 tGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTta                                                                                                         <  1:343405/141‑1 (MQ=255)

                                   aaaaTTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTtaat                                                                                                       <  2:564744/141‑1 (MQ=255)

                                    aaaTTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTtaata                                                                                                      <  2:412411/141‑1 (MQ=255)

                                         ttATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGtt                                                                                                 >  2:1078072/1‑141 (MQ=255)

                                           aTTCGCTTTTTTTTTTTTTTTTTCAACATCAGGCACTTTATTTTGAGAAAAATCAGCTAAATCTGTTAAAGCC‑TTTTTCGCTCGTGCCTGATTATTATTTATTAATCTTTCCGCTTTATCATAACCATTTAACAACGTTgg                                                                                               >  2:132552/1‑141 (MQ=255)

                                           aTTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTgg                                                                                               <  2:315579/141‑1 (MQ=255)

                                           aTTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTgg                                                                                               <  2:965918/141‑1 (MQ=255)

                                            ttCGCTTTTTTTAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGt                                                                                              >  2:725501/1‑141 (MQ=255)

                                            ttCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGt                                                                                              >  2:725439/1‑141 (MQ=255)

                                            ttCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGt                                                                                              <  1:302365/141‑1 (MQ=255)

                                             tCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTa                                                                                             >  2:235505/1‑141 (MQ=255)

                                              cGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTaa                                                                                            <  1:130027/141‑1 (MQ=255)

                                              cGCTGTTTTCAAATCTTTTTCAACATCATGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTaa                                                                                            <  2:799969/141‑1 (MQ=255)

                                                cTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAAt                                                                                          >  1:179622/1‑141 (MQ=255)

                                                cTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAAt                                                                                          >  1:179129/1‑141 (MQ=255)

                                                 ttttttCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAAtt                                                                                         <  2:1121963/141‑1 (MQ=255)

                                                   ttttCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAAtttt                                                                                       <  1:628148/141‑1 (MQ=255)

                                                   ttttCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAAtttt                                                                                       >  1:698005/1‑141 (MQ=255)

                                                      tCAAATTTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTAt                                                                                    >  2:888283/1‑141 (MQ=255)

                                                      tCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTAt                                                                                    >  2:413463/1‑141 (MQ=255)

                                                       cAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTAtt                                                                                   >  1:636361/1‑141 (MQ=255)

                                                        taaTTTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTc                                                                                  >  2:594908/2‑141 (MQ=255)

                                                         aaTCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTca                                                                                 >  1:523273/1‑141 (MQ=255)

                                                          aTCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTcac                                                                                <  1:673787/141‑1 (MQ=255)

                                                          aTCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTcac                                                                                >  1:820278/1‑141 (MQ=255)

                                                          aTCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTCGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTcac                                                                                <  1:947969/141‑1 (MQ=255)

                                                            cTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCacac                                                                              <  1:52301/141‑1 (MQ=255)

                                                               tttCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTg                                                                           >  2:876821/1‑141 (MQ=255)

                                                               tttCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTg                                                                           >  1:1155036/1‑141 (MQ=255)

                                                                ttCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGc                                                                          <  2:818952/141‑1 (MQ=255)

                                                                ttCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGc                                                                          <  2:595961/141‑1 (MQ=255)

                                                                 tCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCt                                                                         >  1:970563/1‑141 (MQ=255)

                                                                  cAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTg                                                                        <  1:799489/141‑1 (MQ=255)

                                                                  cAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTg                                                                        <  1:392731/141‑1 (MQ=255)

                                                                   aaCATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTTTTTTTTTTTTTATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTTCTGt                                                                       >  2:203533/1‑141 (MQ=255)

                                                                       ttttgCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTTTTTTTTATTTTTTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGct                                                                   >  2:124374/5‑140 (MQ=255)

                                                                       tCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCa                                                                   >  1:81335/1‑141 (MQ=255)

                                                                        cAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCAt                                                                  <  2:657150/141‑1 (MQ=255)

                                                                           gCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAg                                                               >  1:793225/1‑141 (MQ=255)

                                                                            cAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTTTTTTTTTTTTTATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGt                                                              >  2:1148944/1‑141 (MQ=255)

                                                                            cAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGt                                                              <  1:1003804/141‑1 (MQ=255)

                                                                             aaTTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCCTTTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGt                                                              >  2:199852/1‑141 (MQ=255)

                                                                              atttatttTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTa                                                            >  1:384796/1‑141 (MQ=255)

                                                                                  atttTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCg                                                        <  1:103785/141‑1 (MQ=255)

                                                                                   ttttGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGc                                                       <  1:967786/141‑1 (MQ=255)

                                                                                      tGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGt                                                    <  2:280900/141‑1 (MQ=255)

                                                                                       gagaAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGtt                                                   <  1:1078072/141‑1 (MQ=255)

                                                                                       gagaAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGtt                                                   <  1:702075/141‑1 (MQ=255)

                                                                                         ataaaaatcagccacaagcgaaaaaggctttatcagatttagctgatttttATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTc                                                  >  1:904817‑M2/52‑141 (MQ=255)

                                                                                         aAAAAAGCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCt                                                 >  1:601731‑M1/2‑141 (MQ=255)

                                                                                           AAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTaa                                               >  1:393656‑M1/1‑141 (MQ=255)

                                                                                            aaaatcagccacaagcgaaaaaggctttatcagatttagctgatttttATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTaa                                               >  1:1036787‑M2/49‑141 (MQ=255)

                                                                                             aaatcagccacaagcgaaaaaggctttatcagatttagctgatttttATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAAc                                              >  2:552587‑M2/48‑141 (MQ=255)

                                                                                               TCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACtgt                                           <  1:584765‑M1/141‑1 (MQ=255)

                                                                                                 AGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTgg                                         >  1:622601‑M1/1‑141 (MQ=255)

                                                                                                  GCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGt                                        <  1:763457‑M1/141‑1 (MQ=255)

                                                                                                   CTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTa                                       >  2:99056‑M1/1‑141 (MQ=255)

                                                                                                          tGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCAtt                                <  1:420519/141‑1 (MQ=255)

                                                                                                          tGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCAtt                                <  1:952851/141‑1 (MQ=255)

                                                                                                           gATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTg                               <  1:862006/141‑1 (MQ=255)

                                                                                                            aTAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTgc                              <  1:888283/141‑1 (MQ=255)

                                                                                                               aaGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGca                           >  2:483838/1‑141 (MQ=255)

                                                                                                                aGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGcac                          <  2:747483/141‑1 (MQ=255)

                                                                                                                  cc‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGCACaa                        <  2:108298/141‑1 (MQ=255)

                                                                                                                   c‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCTCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGCGCaaa                       <  2:25976/141‑1 (MQ=255)

                                                                                                                      ttttCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGCACAAAGt                     >  1:670554/1‑141 (MQ=255)

                                                                                                                        ttCTCTTTTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGCACAAAGTTa                   >  2:1089782/1‑141 (MQ=255)

                                                                                                                          cGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGCACAAAGTTagc                 <  2:674373/141‑1 (MQ=255)

                                                                                                                          cGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGCACAAAGTTagc                 <  2:228690/141‑1 (MQ=255)

                                                                                                                                 ggCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGCACAAAGTTAGCAGCTTTa          <  2:91200/141‑1 (MQ=255)

                                                                                                                                    tgatttttATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGCACAAAGTTAGCAGCTTTAGCt       <  2:108913‑M2/133‑1 (MQ=255)

                                                                                                                                    tgatttttATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGCACAAAGTTAGCAGCTTTAGCt       <  2:281550‑M2/133‑1 (MQ=255)

                                                                                                                                    tgatttttATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGCACAAAGTTAGCAGCTTTAGCt       <  1:811064‑M2/133‑1 (MQ=255)

                                                                                                                                        ttttATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGCACAAAGTTAGCAGCTTTAGCTACAt   <  2:514284‑M2/137‑1 (MQ=255)

                                                                                                                                         tttATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGCACAAAGTTAGCAGCTTTAGCTACATc  <  1:826900‑M2/138‑1 (MQ=255)

ATTTGTCGACTGCATCATCTTTGTCTAATTTCTTGAAAATTTTATTCGCTTTTTTCAAATCTTTTTCAACATCAGGCAATTTATTTTGAGAAAAATCAGCTAAATCTGATAAAGCC‑TTTTTCGCTTGTGGCTGATTTTTATTTAGTAATCCTACCGCTTGATCATAACCATTTAATAACGTTGGTAAATTTTTATTCACACTTGCTGTCGCATTAGTTAATCGCTGTTCTAACTGTGGTAAGTCATTGCGCACAAAGTTAGCAGCTTTAGCTACATC  >  CP000730/2793374‑2793650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.