Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000730	1041427	1041584	158	2 [0]	[1] 2	USA300HOU_0984	glycosyltransferase

AGTTAGATGTGAATAAAGGTGGTATGACCTCTTCGATGTTCAATAGAAGTAAAGAGTTTTATGATGCGGACATACCTGCTGATATTGTTACTTTCGATTACAAAGGAAAC  >  CP000730/1041317‑1041426                                                                                                              | aGTTAGATGTGAATAAAGGTGGTATGACCTCTTCGATGTTCAATAGAAGTAAAGAGTTTTATGATGCGGACATACCTGCTGATATTGTTACTTTCGATTACAAAGGAAAc  >  1:38785/1‑110 (MQ=255) aGTTAGATGTGAATAAAGGTGGTATGACCTCTTCGATGTTCAATAGAAGTAAAGAGTTTTATGATGCGGACATACCTGCTGATATTGTTACTTTCGATTACAAAGGAAAc  <  2:38785/110‑1 (MQ=255)                                                                                                              | AGTTAGATGTGAATAAAGGTGGTATGACCTCTTCGATGTTCAATAGAAGTAAAGAGTTTTATGATGCGGACATACCTGCTGATATTGTTACTTTCGATTACAAAGGAAAC  >  CP000730/1041317‑1041426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑