| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2333009 = | 70 (1.070) | 3 (0.050) | 3/234 | NT | 5.1% | intergenic (‑119/+249) | lacA/lacR | galactose‑6‑phosphate isomerase LacA subunit/lactose phosphotransferase system repressor |
| ? | CP000730 | 2333060 = | 48 (0.810) | intergenic (‑170/+198) | lacA/lacR | galactose‑6‑phosphate isomerase LacA subunit/lactose phosphotransferase system repressor | |||||
ACGGGAACCTCGACAAAGTTTTACTACAATTTCAGACGAATACCTAATTAAAACAACACCACAATATGAATGTTCACTTATTGTTTGAAAATACGTCATAAACAAACATATTATAAACATATTATGTTGATTTATTGTTTGTTTATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2333155‑2333009‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtttgtttatgACGTATTTTCAAACAATAAGTG‑AACATTCATATTGTGGTGTTGTTTTAATTAGGTATTCGTCTGAAATTGTAGTAAAACTTTGTCGAGGTTCCCGTTGACATAAATTTGCATAAAAAATAGCCCATAAATGAATGCAAAT > CP000730/2333060‑2333199 ACGGGAACCTCGACAAAGTTTTACTACAATTTCAGACGAATACCTAATTAAAACAACACCACAATATGAATGTTCACTTATTGTTTGAAAATACGTCATAAACAAACATATTATAAACATATTATGTTGATTTATTGTTTG < 1:169397/141‑1ACGGGAACCTCGACAAAGTTTTACTACAATTTCAGACGAATACCTAATTAAAACAACACCACAATATGAATGTTCACTTATTGTTTGAAAATACGTCATAAACAAACATATTATAAACATATTATGTTGATTTATTGTTTG < 2:572298/141‑1 GGGAACCTCGACAAAGTTTTACTACAATTTCAGACGAATACCTAATTAAAACAACACCACAATATGAATGTTCACTTATTGTTTGAAAATACGTCATAAACAAACATATTATAAACATATTATGTTGATTTATTGTTTGTT < 1:698088/141‑1 ACCTCGACAAAGTTTTACTACAATTTCAGACGAATACCTAATTAAAACAACACCACAATATGAATGTTCACTTATTGTTTGAAAATACGTCATAAACAAACATATTATAAACATATTATGTTGATTTATTGTTTGTTTATG > 1:451130/1‑141 ACCTCGACAAAGTTTTACTACAATTTCAGACGAATACCTAATTAAAACAACACCACAATATGAATGTTCACTTATTGTTTGAAAATACGTCATAAACAAACATATTATAAACATATTATGTTGATTTATTGTTTGTTTATG > 1:486201/1‑141 ACCTCGACAAAGTTTTACTACAATTTCAGACGAATACCTAATTAAAACAACACCACAATATGAATGTTCACTTATTGTTTGAAAATACGTCATAAACAAACATATTATAAACATATTATGTTGATTTATTGTTTGTTTATG > 1:599689/1‑141 ACCTCGACAAAGTTTTACTACAATTTCAGACGAATACCTAATTAAAACAACACCACAATATGAATGTTCACTTATTGTTTGAAAATACGTCATAAACAAACATATTATAAACATATTATGTTGATATATTGTTTGTTTATG > 2:17157/1‑141 AAACAAACATATTATAAACATATTATGTTGATTTATTGTTTGTTTATGACGTATTTTCAAACAATAAGTG‑AACATTCATATTGTGGTGTTGTTTTAATTAGGTATTCGTCTGAAATTGTAGTAAAACTTTGTCGAGGTTCC > 1:658492/1‑141 AACAAACATATTATAAACATATTATGTTGATTTATTGTTTGTTTATGACGTATTTTCAAACAATAAGTG‑AACATTCGTATTGGGGTGTTGTTTTAGTTAGGTATTCGTCTGAAATTGTAGTAAAACTTTGTCGAGGTTCCC > 1:664090/1‑141 AACATATTATAAACATATTATGTTGATTTATTGTTTGTTTATGACGTATTTTCAAACAATAAGTG‑AACATTCATATTGTGGTGTTGTTTTAATTAGGTATTCGTCTGAAATTGTAGTAAAACTTTGTCGAGGTTCCCGTTG > 2:517928/1‑141 GTTTGTTTATGACGTATTTTCAAACAATAAGTG‑AACATTCATATTGTGGTGTTGTTTTAATTAGGTATTCGTCTGAAATTGTAGTAAAACTTTGTCGAGGTTCCCGTTGACATAAATTTGCATAAAAAATAGCCCATAAAT > 1:643993/1‑141 TTGTTTATGACGTATTTTCAAACAATAAGTG‑AACATTCATATTGTGGTGTTGTTTTAATTAGGTATTCGTCTGAAATTGTAGTAAAACTTTGTCGAGGTTCCCGTTGACATAAATTTGCATAAAAAATAGCCCATAAATGA > 2:256985/1‑141 TGTTTATGACGTATTTTCAAACAATAAGTG‑AACATTCATATTGTGGTGTTGTTTTAATTAGGTATTCGTCTGAAATTGTAGTAAAACTTTGTCGAGGTTCCCGTTGACATAAATTTGCATAAAAAATAGCCCATAAATGAA < 2:460065/141‑1 GTTTATGACGTATTTTCAAACAATAAGTG‑AACATTCATATTGTGGTGTTGTTTTAATTAGGTATTCGTCTGAAATTGTAGTAAAACTTTGTCGAGGTTCCCGTTGACATAAATTTGCATAAAAAATAGCCCATAAATGAAT > 1:672342/1‑141 GTTTATGACGTATTTTCAAACAATAAGTG‑AACATTCATATTGTGGTGTTGTTTTAATTAGGTATTCGTCTGAAATTGTAGTAAAACTTTGTCGAGGTTCCCGTTGACATAAATTTGCATAAAAAATAGCCCATAAATGAAT > 2:706437/1‑141 TATGACGTATTTTCAAACAATAAGTG‑AACATTCATATTGTGGTGTTGTTTTAATTAGGTATTCGTCTGAAATTGTAGTAAAACTTTGTCGAGGTTCCCGTTGACATAAATTTGCATAAAAAATAGCCCATAAATGAATGCA > 1:348949/1‑141 TGACGTATTTTCAAACAATAAGTG‑AACATTCATATTGTGGTGTTGTTTTAATTAGGTATTCGTCTGAAATTGTAGTAAAACTTTGTCGAGGTTCCCGTTGACATAAATTTGCATAAAAAATAGCCCATAAATGAATGCAAA > 2:424216/1‑141 GACGTATTTTCAAACAATAAGTG‑AACATTCATATTGTGGTGTTGTTTTAATTAGGTATTCGTCTGAAATTGTAGTAAAACTTTGTCGAGGTTCCCGTTGACATAAATTTGCATAAAAAATAGCCCATAAATGAATGCAAAT > 2:404810/1‑141 GACGTATTTTCAAA‑AATTGCTGTTACATTCATATTGTGGTGTTGTTTTAATTAGGTATTCGTCTGAAATTGTAGTAAAACTTTGTCGAGGTTCCCGTTGACATAAATTTGCATAAAAAATAGCCCATAAATGAATGCAAAT < 1:206374/141‑1 ACGGGAACCTCGACAAAGTTTTACTACAATTTCAGACGAATACCTAATTAAAACAACACCACAATATGAATGTTCACTTATTGTTTGAAAATACGTCATAAACAAACATATTATAAACATATTATGTTGATTTATTGTTTGTTTATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2333155‑2333009‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtttgtttatgACGTATTTTCAAACAATAAGTG‑AACATTCATATTGTGGTGTTGTTTTAATTAGGTATTCGTCTGAAATTGTAGTAAAACTTTGTCGAGGTTCCCGTTGACATAAATTTGCATAAAAAATAGCCCATAAATGAATGCAAAT > CP000730/2333060‑2333199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |