New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 920390	46 (0.710)	3 (0.050)	3/230	NT	5.9%	coding (39/135 nt)	USA300HOU_0880	hypothetical protein
	?	CP000730	= 920428	55 (0.950)					coding (1/135 nt)	USA300HOU_0880	hypothetical protein

CGACAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGT  >  CP000730/920251‑920529                                                                                                                                             |                                                                                                                                            cGACAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAaag                                                                                                                                            <  2:136412/141‑1 (MQ=255)   aCAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAaagca                                                                                                                                          <  2:613895/141‑1 (MQ=255)      aaGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAaagcacaa                                                                                                                                       >  1:563948/1‑141 (MQ=255)                aCATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCaa                                                                                                                             <  2:166876/141‑1 (MQ=255)                   tatGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACa                                                                                                                          >  2:38600/1‑141 (MQ=255)                   tatGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACa                                                                                                                          >  2:38606/1‑141 (MQ=255)                    atGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACat                                                                                                                         >  2:378465/1‑141 (MQ=255)                    atGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACat                                                                                                                         >  1:500847/1‑141 (MQ=255)                      gtggagtggaCAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCACAAAAAGCACAAGCACCCCCAAACatt                                                                                                                        >  1:571002/1‑141 (MQ=255)                        ggagtggaCAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACattatt                                                                                                                     <  1:749415/141‑1 (MQ=255)                                        gcgACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCATATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATtt                                                                                                     >  1:624379‑M2/1‑139 (MQ=255)                                        gcgACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAatggcaagcactaaaataatgtttgggggtgcttgtgctt                                                                                                     <  2:729334‑M1/141‑41 (MQ=255)                                        gcgACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATtt                                                                                                     <  2:777511‑M2/141‑3 (MQ=255)                                         cgACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAatggcaagcactaaaataatgtttgggggtgcttgtgcttt                                                                                                    <  1:123567‑M1/141‑42 (MQ=255)                                            cTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgt                                                                                                 <  2:730205‑M2/141‑7 (MQ=255)                                              aGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtgg                                                                                               >  2:238171‑M2/1‑133 (MQ=255)                                              aGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtgg                                                                                               >  1:684708‑M2/1‑133 (MQ=255)                                               gCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCTATttttgtgga                                                                                              <  2:695748‑M2/141‑10 (MQ=255)                                               gCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTATAGTGCTTGCCATttttgtgga                                                                                              <  2:778885‑M2/141‑10 (MQ=255)                                                    aacGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtggattgcg                                                                                         >  2:612295‑M2/1‑127 (MQ=255)                                                       gCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAACGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGttt                                                                                      <  2:665510/141‑1 (MQ=255)                                                        cATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTc                                                                                     <  1:372437/141‑1 (MQ=255)                                                         aTCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCt                                                                                    >  1:341680/1‑141 (MQ=255)                                                         aTCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCt                                                                                    >  1:349972/1‑141 (MQ=255)                                                          tCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTa                                                                                   >  1:321060/1‑141 (MQ=255)                                                           cccGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTAt                                                                                  >  1:16701/1‑141 (MQ=255)                                                               ccAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTa                                                                              <  1:575231/141‑1 (MQ=255)                                                                  acacCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAAGAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATCGTTTTAGTACTTGCCATTTTTGTCGATTGCGTTTCTATTGTACCa                                                                           >  2:393606/1‑141 (MQ=255)                                                                   cacCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCaa                                                                          <  1:606063/141‑1 (MQ=255)                                                                    acCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAt                                                                         <  1:692566/141‑1 (MQ=255)                                                                    acCATCATGTCCAATATAATCAATCAAATTAATCAAACCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAt                                                                         <  1:24421/141‑1 (MQ=255)                                                                    acCAGCATGTCCAATAGAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAGGCACAGGCGCCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAAt                                                                         <  2:510132/141‑1 (MQ=255)                                                                      catcatGTCCAATATAATCAATCAAATTCATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATATTTGTGGATTGTGTTTCTATTTTACCAAttt                                                                       >  2:263483/1‑141 (MQ=255)                                                                          atGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATc                                                                   >  2:491071/1‑141 (MQ=255)                                                                           tGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATcc                                                                  >  2:117563/1‑140 (MQ=255)                                                                            gTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAt                                                                                                       <  1:418758/103‑1 (MQ=255)                                                                            gTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCAt                                                                                                       >  2:418758/1‑103 (MQ=255)                                                                             tCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATctttgtggactgcggtcgattatttatattgcatgattt                                                                <  2:572975‑M2/141‑40 (MQ=255)                                                                             tCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCaaa                                                                >  2:515700/1‑141 (MQ=255)                                                                                aaTATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGa                                                             >  1:773551/1‑141 (MQ=255)                                                                                     aatcaatcAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACa                                                        <  1:539644/141‑1 (MQ=255)                                                                                        cactcacATTACTGAAATCATGCAATATAAATAATCGACCGCAATCCAC‑ACAACCACAAGCACCCCCAAACACTAGTCAAGTGCTTGCCATTGTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCa                                                     >  2:111379/4‑141 (MQ=255)                                                                                               aTTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATATAATCAAACGAAAACATCAAGCTGaa                                              >  1:737853/1‑141 (MQ=255)                                                                                                ttAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAg                                             >  2:297412/1‑141 (MQ=255)                                                                                                  aatcaaatcaTGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGAt                                           >  2:237478/1‑141 (MQ=255)                                                                                                    tcaaatcaTGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCg                                         >  1:236003/1‑141 (MQ=255)                                                                                                     caaatcaTGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGc                                        >  2:243269/1‑141 (MQ=255)                                                                                                      aaatcaTGCAATATAAATAATCGACCGCAGTCCAC‑AAAGatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcggtcgattatttatattgcatgatttgattaatttgattgattatattgga                                       <  2:572975‑M1/141‑103 (MQ=255)                                                                                                       aatcaTGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCg                                      <  2:628303/141‑1 (MQ=255)                                                                                                         tcaTGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGaa                                    <  1:40629/141‑1 (MQ=255)                                                                                                            tGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGa                                 >  2:73900/1‑141 (MQ=255)                                                                                                            tGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGa                                 >  1:607703/1‑141 (MQ=255)                                                                                                               aaTATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGAttt                              >  1:110777/1‑141 (MQ=255)                                                                                                                     aataatCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCa                        >  1:643612/1‑141 (MQ=255)                                                                                                                           cGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaa                  >  1:88945/1‑141 (MQ=255)                                                                                                                           cGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaa                  <  2:23788/141‑1 (MQ=255)                                                                                                                           cGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATAAAGaaaa                  <  2:384046/141‑1 (MQ=255)                                                                                                                            gACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCaaaa                 >  1:559711/1‑141 (MQ=255)                                                                                                                               cGCAATCCAC‑AAAAatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcggtcgattatttatattgcatgatttgattaatttgattgattatattggacatgatggtgttggcgggatgcgtt              >  2:612295‑M1/1‑14 (MQ=255)                                                                                                                                 cAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATc            >  1:626448/1‑141 (MQ=255)                                                                                                                                    tCCAC‑AAAAatggcaagcactataataatgtttgggggtgcttgtgcttttgtggattgcggtcgattatttatattgcatgatttgattaatttgattgattatattggacatgatggtgttggcgggatgcgttgttgc         <  2:778885‑M1/141‑133 (MQ=255)                                                                                                                                    tCCAC‑AAAAatagcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcggtcgattatttatattgcatgatttgattaatttgattgattatattggacatgatggtgttggcgggatgcgttgttgc         <  2:695748‑M1/141‑133 (MQ=255)                                                                                                                                    tCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCaaa         <  2:485224/141‑1 (MQ=255)                                                                                                                                     ccAC‑AAAAatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcggtcgattatttatattgcatgatttgattaatttgattgattatattggacatgatggtgttggcgggatgcgttgttgct        >  1:684708‑M1/1‑8 (MQ=255)                                                                                                                                     ccAC‑AAAAatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcggtcgattatttatattgcatgatttgattaatttgattgattatattggacatgatggtgttggcgggatgcgttgttgct        >  2:238171‑M1/1‑8 (MQ=255)                                                                                                                                       ac‑aAAAatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcggtcgattatttatattgcatgatttgattaatttgattgattatattggacatgatggtgttggcgggatgcgttgttgctag      <  2:730205‑M1/141‑136 (MQ=255)                                                                                                                                        c‑aAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTTTTTTTTTTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTaa     >  2:350758/1‑141 (MQ=255)                                                                                                                                           aaaGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATttttgtggattgcggtcgattatttatattgcatgatttgattaatttgattgattatattggacatgatggtgttggcgggatgcgttgttgctagtcg   <  1:123567‑M2/141‑101 (MQ=255)                                                                                                                                            aagcacaagcacCCCCAAACATTATTTTAGTGCTTGCCATttttgtggattgcggtcgattatttatattgcatgatttgattaatttgattgattatattggacatgatggtgttggcgggatgcgttgttgctagtcgc  <  2:729334‑M2/141‑102 (MQ=255)                                                                                                                                            aaatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcggtcgattatttatattgcatgatttgattaatttgattgattatattggacatgatggtgttggcgggatgcgttgttgctagtcgc  <  2:777511‑M1/141‑140 (MQ=255)                                                                                                                                            aaatggcaagcactaaaataatgtttgggggtgcttgtgcttttgtggattgcggtcgattatttatattgcatgatttgattaatatgattgattatattggacatgatggtgttggcgggatgcgttgttgctagtcgc  >  1:624379‑M1/1‑2 (MQ=255)                                                                                                                                             |                                                                                                                                            CGACAAAGAGTTAATACATATGTGGAGTGGACAAAGCCCGCGACTAGCAACAACGCATCCCGCCAACACCATCATGTCCAATATAATCAATCAAATTAATCAAATCATGCAATATAAATAATCGACCGCAATCCAC‑AAAAGCACAAGCACCCCCAAACATTATTTTAGTGCTTGCCATTTTTGTGGATTGCGTTTCTATTTTACCAATTTAATCAAACGAAAACATCAAGCTGAAGATCGCCGAAAGATTTTAATCAAGCAAAAACATCAAACTAAAGT  >  CP000730/920251‑920529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.