New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1917812	48 (0.740)	4 (0.070)	4/236	NT	8.2%	intergenic (+28/+108)	pckA/pckA	phosphoenolpyruvate carboxykinase (ATP)/transposase
	?	CP000730	= 1917816	46 (0.770)					intergenic (+32/+104)	pckA/pckA	phosphoenolpyruvate carboxykinase (ATP)/transposase

GAGAAATATAAAGCACAAGCAGAAGATTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATTCCAGCAACCCTAAAGGGTTACTCTTTTTTCTTTCTTTTTTTATTTTTCT  >  CP000730/1917674‑1917951                                                                                                                                            |                                                                                                                                            gagaAATATAAAGCACAAGCAGAAGATTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCgtgt                                                                                                                                           <  1:681234/141‑1 (MQ=255) gagaAATATAAAGCACAAGCAGAAGATTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCgtgt                                                                                                                                           <  1:155422/141‑1 (MQ=255) gagaAATATAAAGCACAAGCAGAAGATTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTtc                                                                                                                                           <  1:122113‑M1/141‑3 (MQ=255)     aaTATAAAGCACAAGCAGAAGATTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTtcacac                                                                                                                                       <  2:325739‑M1/141‑7 (MQ=255)        ataAAGCACAAGCAGAAGATTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTtcacacggg                                                                                                                                    <  2:551185‑M1/141‑10 (MQ=255)        ataAAGCACAAGCAGAAGATTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAacggg                                                                                                                                    <  1:320313‑M2/141‑6 (MQ=255)        ataAAGCACAAGCAGAAGATTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAacggg                                                                                                                                    <  2:158059‑M2/141‑6 (MQ=255)        ataAAGCACAAGCAGAAGATTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAacggg                                                                                                                                    >  2:685090‑M2/1‑136 (MQ=255)        ataAAGCACAAGCAGAAGATTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGGGAacggg                                                                                                                                    >  1:622972‑M2/1‑136 (MQ=255)         taAAGCACAAGCAGAAGATTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAacgggt                                                                                                                                   <  2:535936‑M2/141‑7 (MQ=255)             gCACAAGCAGAAGATTTAATTCATCGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAAAGTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAacgggtggt                                                                                                                                >  1:266840‑M2/1‑132 (MQ=255)                  aGCAGAAGATTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTc                                                                                                                          >  1:629771/1‑141 (MQ=255)                  aGCAGAAGATTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTc                                                                                                                          >  1:585326/1‑141 (MQ=255)                     agaagaTTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGc                                                                                                                       <  1:731/141‑1 (MQ=255)                          aTTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCta                                                                                                                  <  1:690015/141‑1 (MQ=255)                           tttAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCtat                                                                                                                 <  2:88881/141‑1 (MQ=255)                           tttAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCtat                                                                                                                 <  2:503482/141‑1 (MQ=255)                             tacttCAACGATTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTCGCACATATAGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATaa                                                                                                               >  2:72572/4‑141 (MQ=38)                                ttCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGcc                                                                                                            <  2:704734/141‑1 (MQ=255)                                ttCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGcc                                                                                                            <  2:256166/141‑1 (MQ=255)                                    aCGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGccttcc                                                                                                        >  2:499262/1‑141 (MQ=255)                                       ttttGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTa                                                                                                     >  1:396228/1‑141 (MQ=255)                                        tttGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTAc                                                                                                    <  1:136927/141‑1 (MQ=255)                                        tttGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTAc                                                                                                    >  2:36938/1‑141 (MQ=255)                                        tttGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTAc                                                                                                    >  2:49930/1‑141 (MQ=255)                                         ttGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACt                                                                                                   >  1:547293/1‑141 (MQ=255)                                          tGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTg                                                                                                  <  1:331339/141‑1 (MQ=255)                                           gAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTgg                                                                                                 >  2:713313/1‑141 (MQ=255)                                               aGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAg                                                                                             <  2:4039/141‑1 (MQ=255)                                                 acctggaaaaaatttgatgAAGAA‑CTTGAACATATTACTGAAAAAGGTAACTTCAAAAAATAAATTTGAATACTAAATCAAAACCACCCTTtcactcagttggttttgatttagtattcaaatttatttgttgaagctacc                                                                                           <  2:753119‑M1/134‑51 (MQ=255)                                                   cTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCt                                                                                         <  1:552720/141‑1 (MQ=255)                                                   cTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCt                                                                                         <  1:170454/141‑1 (MQ=255)                                                      cGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTaaa                                                                                      >  2:87210/1‑141 (MQ=255)                                                          aaaTTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAggg                                                                                  <  2:157394/141‑1 (MQ=255)                                                          aaaTTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAggg                                                                                  <  1:180123/141‑1 (MQ=255)                                                          aaaTTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAACAAATTTTAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAggg                                                                                  <  1:783347/141‑1 (MQ=255)                                                            aTTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCa                                                                                >  2:314690/1‑141 (MQ=255)                                                                ggTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGa                                                                            >  2:575243/1‑141 (MQ=255)                                                                 gTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGAc                                                                           >  1:407205/1‑141 (MQ=255)                                                                    aaaaa‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGT‑TCAcacgggtggttttgatttagtattcaaatttatttgttgaagctacctttttcagcaatatgttca                                                                       >  1:475919‑M2/1‑75 (MQ=255)                                                                     aaaa‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGt                                                                       <  1:717774/141‑1 (MQ=255)                                                                      aaa‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTc                                                                      <  1:134450/141‑1 (MQ=255)                                                                        a‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAg                                                                    <  2:615836/141‑1 (MQ=255)                                                                            tGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTgtgaacgggtggttttgatttagtattcaaatttatttgttgaagctacctttttcagcaatatgttcaacttttt                                                                 >  1:475919‑M1/1‑65 (MQ=255)                                                                               aCATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACt                                                              <  2:673970/141‑1 (MQ=255)                                                                                 atatTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGc                                                            >  1:676558/1‑141 (MQ=255)                                                                                  tatTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCa                                                           <  1:387860/141‑1 (MQ=255)                                                                                  tatTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCa                                                           <  2:634580/141‑1 (MQ=255)                                                                                  tatTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCa                                                           <  1:124/141‑1 (MQ=255)                                                                                   atTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCac                                                          >  1:367735/1‑141 (MQ=255)                                                                                   atTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCac                                                          >  1:367835/1‑141 (MQ=255)                                                                                    ttGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCact                                                         <  1:424990/141‑1 (MQ=255)                                                                                          aaaaaGGTAGCTTCAACAAATTAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTAtt                                                   <  2:727358/141‑1 (MQ=255)                                                                                              aGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATTCCAg                                               >  1:145335/1‑141 (MQ=255)                                                                                               ggTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCAACTGAGTGAaagggtggttttgatttagtattcaaatttattttttgaagttacctttttcagtaatatgttcaagttcttcatcaaattttttccaggt                                              <  2:753119‑M2/141‑92 (MQ=255)                                                                                                   gCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATTCCAGCAAcc                                          >  1:606935/1‑141 (MQ=255)                                                                                                     ttCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATTCCAGCAACCCt                                        <  2:585326/141‑1 (MQ=255)                                                                                                       caacaaATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATTCCAGCAACCCttt                                      <  1:629443/141‑3 (MQ=255)                                                                                                             ataaatTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATTCCAGCAACCCTAAAGGGtt                                >  2:5902/1‑141 (MQ=255)                                                                                                              taaatTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCCGCTAGAAGCCTTCCTCACCGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATTCCCGCAACCCTAAAGGGTTa                               >  1:549895/1‑141 (MQ=14)                                                                                                               aaatTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATTCCAGCAACCCTAAAGGGTTAc                              <  1:446101/141‑1 (MQ=40)                                                                                                                aatTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATTCCAGCAACCCTAAAGGGTTAct                             <  1:282552/141‑1 (MQ=39)                                                                                                                  tttGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATTCCAGCAACCCTAAAGGGTTActct                           >  1:253463/1‑141 (MQ=38)                                                                                                                                    accaccCGTtcacacgggtggttttgatttagtattcaaatttatttgttgaagctacctttttcagcaatatgttcaacttttttcaccaaatttttcgaagttcttttcaaaacgatgaattaaatcttctgcttgtgc         >  1:266840‑M1/1‑9 (MQ=255)                                                                                                                                       accCGTtcacacgggtggttttgatttagtattcaaatttatttgttgaagctacctttttcagcaatatgttcaactttttcaccaaatttttcgaagttcttttcaaaacgttgaattaaatcttctgcttgtgcttta      <  2:535936‑M1/141‑136 (MQ=255)                                                                                                                                        cccGTtcccacgggtggttttgatttagtattcaaatttatttgttgaagctacctttttcagcaatatgttcaactttttcaccaaatttttcgaagttcttttcaaaacgttgaattaaatcttctgcttgtgctttat     >  1:622972‑M1/1‑5 (MQ=255)                                                                                                                                        cccGTtcacacgggtggttttgatttagtattcaaatttatttgttgaagctacctttttcagcaatatgttcaactttttcaccaaatttttcgaagttcttttcaaaacgttgaattaaatcttctgcttgtgctttat     >  2:685090‑M1/1‑5 (MQ=255)                                                                                                                                        cccGTtcacacgggtggttttgatttagtattcaaatttatttgttgaagctacctttttcagcaatatgttcaactttttcaccaaatttttcgaagttcttttcaaaacgttgaattaaatcttctgcttgtgctttat     <  1:320313‑M1/141‑137 (MQ=255)                                                                                                                                        cccGTtcacacgggtggttttgatttagtattcaaatttatttgttgaagctacctttttcagcaatatgttcaactttttcaccaaatttttcgaagttcttttcaaaacgttgaattaaatcttctgcttgtgctttat     <  2:158059‑M1/141‑137 (MQ=255)                                                                                                                                        cccGTGTGAacgggtggttttgatttagtattcaaatttatttgttgaagctacctttttcagcaatatgttcaactttttcaccaaatttttcgaagttcttttcaaaacgttgaattaaatcttctgcttgtgctttat     <  2:551185‑M2/141‑133 (MQ=255)                                                                                                                                           gtgtGAacgggtggttttgatttagtattcaaatttatttgttgaagctacctttttcagcaatatgttcaactttttcaccaaatttttcgaagttcttttcaaaacgttgaattaaatcttctgcttgtgctttatatt  <  2:325739‑M2/141‑136 (MQ=255)                                                                                                                                            |                                                                                                                                            GAGAAATATAAAGCACAAGCAGAAGATTTAATTCAACGTTTTGAAAAGAACTTCGAAAAATTTGGTGAAAAA‑GTTGAACATATTGCTGAAAAAGGTAGCTTCAACAAATAAATTTGAATACTAAATCAAAACCACCCGTGTGAACGGGTGGTTTGTTCTGCGGCTATAAGCCTTCCTTACTGGCCAGCCCTAAAAGGGCACTGACAAGTCAGCCAACTGCACTACTATTCCAGCAACCCTAAAGGGTTACTCTTTTTTCTTTCTTTTTTTATTTTTCT  >  CP000730/1917674‑1917951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.