New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1619594 =	62 (0.950)	3 (0.050)	3/244	NT	5.0%	coding (813/816 nt)	proC	pyrroline‑5‑carboxylate reductase
	?	CP000730	1619661 =	55 (0.890)					intergenic (+64/+41)	proC/rnz	pyrroline‑5‑carboxylate reductase/ribonuclease Z

TAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATAAATTTCATTTATATCTTCTGTATTA  >  CP000730/1619521‑1619801                                                                                                                                              |                                                                                                                                             tAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTtata                                                                                                                                              >  2:413323/1‑141 (MQ=255)     aaaagattttgatagttttaaaatctaatgacaaagtaataaacaatgcttgccaaataacaataaattATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAAttt                                                                                                                                          >  1:696127‑M1/70‑141 (MQ=255)     aTCTATTTTCGAATATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAAttt                                                                                                                                          <  1:115990/141‑1 (MQ=255)     aTCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAAttt                                                                                                                                          <  2:762506/141‑1 (MQ=255)     aTCTATTTTCGAAGAAATTCCAGGCGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAAttt                                                                                                                                          <  1:6857/141‑1 (MQ=255)      tCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAACAACAAACACGACACCACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTa                                                                                                                                         >  1:392004/1‑141 (MQ=255)        tATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTAtt                                                                                                                                       <  1:523109/141‑1 (MQ=255)        tATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTAtt                                                                                                                                       >  1:492433/1‑141 (MQ=255)           tttCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGtt                                                                                                                                    >  2:758683/1‑141 (MQ=255)             tCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTAt                                                                                                                                  >  1:128975/1‑141 (MQ=255)               gAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTAttt                                                                                                                                >  2:691344/1‑141 (MQ=255)                  gATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGc                                                                                                                             >  2:574363/1‑141 (MQ=255)                     tGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAg                                                                                                                          >  1:430218/1‑141 (MQ=255)                      gTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGc                                                                                                                         >  1:476864/1‑141 (MQ=255)                       tCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCa                                                                                                                        >  2:533487/1‑141 (MQ=255)                            aCGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGtt                                                                                                                   <  1:563173/141‑1 (MQ=255)                            aCGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGtt                                                                                                                   <  1:563136/141‑1 (MQ=255)                                tGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTttatt                                                                                                               >  1:777155/1‑141 (MQ=255)                                tGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTttatt                                                                                                               >  2:772613/1‑141 (MQ=255)                                tGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTttatt                                                                                                               >  1:742445/1‑141 (MQ=255)                                   cGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACt                                                                                                            >  2:334239/1‑141 (MQ=255)                                    gTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACtt                                                                                                           >  2:173351/1‑141 (MQ=255)                                      cGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTg                                                                                                         <  1:454120/141‑1 (MQ=255)                                           gtagtaTTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCAtt                                                                                                    <  2:373389/141‑1 (MQ=255)                                            tagtaTTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACAAGTAAGCCTCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTCTAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCAttt                                                                                                   >  2:209021/1‑140 (MQ=255)                                              gtaTTGAACTTTCTAATATAGAAGACCAATAAAGACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGCTA‑TTTTTATAATTTTTTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGa                                                                                                 >  2:179681/1‑141 (MQ=255)                                                 ttGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGAttt                                                                                              <  1:45899/141‑1 (MQ=255)                                                 ttGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGAttt                                                                                              <  1:321321/141‑1 (MQ=255)                                                  tGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGAtttt                                                                                             <  1:502568/141‑1 (MQ=255)                                                     aCTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTaaa                                                                                          <  1:237401/141‑1 (MQ=255)                                                          cTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTAt                                                                                     <  1:267150/141‑1 (MQ=255)                                                           tAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTATTTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTAt                                                                                     >  1:423112/1‑141 (MQ=255)                                                           tAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATc                                                                                    <  2:762017/141‑1 (MQ=255)                                                              tataGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCaaa                                                                                 <  2:140695/141‑1 (MQ=255)                                                               ataGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCaaaa                                                                                >  2:278962/1‑141 (MQ=255)                                                                taGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTCACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAATACTATCaaact                                                                               >  2:130366/1‑139 (MQ=255)                                                                aagtaacacAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAAt                                                                               <  2:167336/133‑1 (MQ=255)                                                                    agaCCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTGA‑TTTTGATAATTTATTGGTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCttt                                                                           >  1:393684/1‑141 (MQ=255)                                                                      aaattataaaaataacccgtcaaacacagtgcttgcgatgatgcatacatgtgttggcgggtttgtttttatAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCtttt                                                                          >  1:696127‑M2/73‑141 (MQ=255)                                                                         aaTAAAAACCAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACaa                                                                      >  1:690756/1‑141 (MQ=255)                                                                          ATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACGGGGTTTGACGGGTTA‑TTTTTATAAGTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTCGATTTTAAAACTATACAAATCTTTTCCaaa                                                                     <  2:783254‑M1/141‑1 (MQ=255)                                                                           TAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACaaaa                                                                    >  2:128975‑M1/1‑141 (MQ=255)                                                                           TAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACaaaa                                                                    <  1:524733‑M1/141‑1 (MQ=255)                                                                            AAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAAt                                                                   >  2:5682‑M1/1‑141 (MQ=255)                                                                            AAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAAt                                                                   >  1:220718‑M1/1‑141 (MQ=255)                                                                              AAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTa                                                                 <  1:141427‑M1/141‑1 (MQ=255)                                                                              AAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTa                                                                 <  1:735960‑M1/141‑1 (MQ=255)                                                                              AAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTa                                                                 <  1:82051‑M1/141‑1 (MQ=255)                                                                                 caaacCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACaaaattaaaa                                                              >  1:31504/1‑141 (MQ=255)                                                                                 caaacCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACaaaattaaaa                                                              >  1:366265/1‑141 (MQ=255)                                                                                 ataacccgtcaaacacagtgcttgcgatgatgcatacatgtgttggcgggtttgtttttatAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACaaaattaaa                                                               >  1:557281‑M2/62‑141 (MQ=255)                                                                                     cccGCCAACACATGTATGCATCATCACATACA‑T‑AGTTGGACGGGTTA‑TTTTTATAAATTATTACTATTTGGCAAGCATTGTTTATAACTTTGTCATTAGACTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGgt                                                        >  1:730123/1‑141 (MQ=255)                                                                                      ccGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAgg                                                         <  2:477156/141‑1 (MQ=255)                                                                                           aaCACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTAt                                                    >  1:515372/1‑141 (MQ=255)                                                                                            acacATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATc                                                   <  2:260226/141‑1 (MQ=255)                                                                                              cacagtgcttgcgatgatgcatacatgtgttggcgggtttgtttttatAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCt                                                  <  2:557281‑M2/93‑1 (MQ=255)                                                                                              acaTGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCtt                                                 >  2:444811/1‑141 (MQ=255)                                                                                               caTGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTc                                                >  2:573981/1‑141 (MQ=255)                                                                                                  gTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCAtt                                             <  1:179317/141‑1 (MQ=255)                                                                                                      gCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGt                                         <  2:153677/141‑1 (MQ=255)                                                                                                         tcatcGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATc                                      <  1:365581/141‑1 (MQ=255)                                                                                                         tcatcGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATc                                      >  1:671665/1‑141 (MQ=255)                                                                                                           atcGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCaa                                    >  1:153252/1‑141 (MQ=255)                                                                                                                     cTGTGTTTGACGGGTTA‑TTTTTTTTATTTTTTTTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGTTaa                          >  2:29489/1‑141 (MQ=255)                                                                                                                     cTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATaa                          >  1:103381/1‑141 (MQ=255)                                                                                                                       gtgtTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATAAAt                        <  1:413323/141‑1 (MQ=255)                                                                                                                        tgtTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATAAAtt                       <  1:345933/141‑1 (MQ=255)                                                                                                                          tttGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATAAATTTc                     <  1:167391/141‑1 (MQ=255)                                                                                                                            tGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTATGTGTATCTTCATTTTGTATCAATGTTTGATAAATTTCAt                   <  1:180912/141‑1 (MQ=255)                                                                                                                              aCGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATAAATTTCAttt                 <  1:475903/141‑1 (MQ=255)                                                                                                                               cGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATAAATGTTTGATAAATTTCATTta                >  1:403159/1‑141 (MQ=255)                                                                                                                                 ggTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATAAATTTCATTtata              <  2:742445/141‑1 (MQ=255)                                                                                                                                 ggTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATAAATTTCATTtata              <  2:777155/141‑1 (MQ=255)                                                                                                                                       tttttatAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATAAATTTCATTTATAtcttc         <  1:216094‑M2/134‑1 (MQ=255)                                                                                                                                         tttatAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATAAATTTCATTTATATCTTCTg       <  1:11079‑M2/136‑1 (MQ=255)                                                                                                                                              aaTTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATAAATTTCATTTATATCTTCTGtatta  <  2:479878/141‑1 (MQ=255)                                                                                                                                              |                                                                                                                                             TAGTATCTATTTTCGAAGATTGTCTAAACGCTGCCGTCGACCGTAGTATTGAACTTTCTAATATAGAAGACCAATAAAAACAAACCCGCCAACACATGTATGCATCATCGCAAGCACTGTGTTTGACGGGTTA‑TTTTTATAATTTATTGTTATTTGGCAAGCATTGTTTATTACTTTGTCATTAGATTTTAAAACTATCAAAATCTTTTACAAAATTAAAATTAGGTGTATCTTCATTTTGTATCAATGTTTGATAAATTTCATTTATATCTTCTGTATTA  >  CP000730/1619521‑1619801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.