| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,187,507 | A→C | N720H (AAC→CAC) | rpoC → | RNA polymerase, beta prime subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,187,507 | 0 | A | C | 98.0% | 150.8 / NA | 50 | N720H (AAC→CAC) | rpoC | RNA polymerase, beta prime subunit |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (26/22); total (27/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
CCAGATCATGTACACCGGCTTCGCCTATGCAGCGCGTTCTGGTGCATCTGTTGGTATCGATGA‑CATGGTCATCCCGGAGAAGAAACACGAAATCATCTCCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACC > NC_000913/4187215‑4187797 | ccAGATCATGTACACCGGCTTCGCCTATGCAGCGCGTTCTGGTGCATCTGTTGGTATCGATGA‑CATGGTCATCCCGGAGAAGAAACACGAAATCATCTCCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAAATGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCGGGTTTCCTTCCACAGCATc > 2:436298/1‑301 (MQ=255) aGATCATGTACACCGGCTTCGCCTATGCAGCGCGTTCTGGTGCATCTGTTGGTATCGATGA‑CATGGTCATCCCGGAGAAGAAACACGAAATCATCTCCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCt > 2:459195/1‑300 (MQ=255) actgtagcccGGGTTCGCTCATGAAGGGGGTTCGGGGGCATCTGTTGGTATCGATGA‑CATGGGCATCCCGGAGAAGAAAAACGAAATCATCTCCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATAGCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACa < 1:350749/291‑1 (MQ=255) cAGCGCGTTCTGGTGCATCTGTTGGTATCGATGA‑CATGGTCATCCCGGAGAAGAAACACGAAATCATCTCCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGCCAGGAAGAGAAGAAGGTTTCCTTCCACAACATCAACATGATGGCCGCCGTGGGTGCGCGTgg > 1:153985/1‑301 (MQ=255) ggTGCATCTGTTGGTATCGATGA‑CATGGTCATCCCGGAGAAGAAACACGAACTCATCTCCGAGGCAGAAGCAGAAGTTGGTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGcac < 1:178779/301‑1 (MQ=255) tgatGGTACCGTTGACCATGGCCA‑CCCGGAAAAAAAACACGAAATCAGCCCCGAGGAAGAAGCAGAATTTTCGGAAATTCGGGGGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGGTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTc < 1:336043/296‑1 (MQ=255) tGTTGGTATCGATGA‑CATGGTCATCCCGGAGAAGAAACACGAAATCATCTCCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGGGAAGCAGGTTTCCTTCCACAGCACCTACAAGATGGCCGACTCAGGTGCGCGGGGTTCTGGGGCACGGAtt > 1:97645/1‑298 (MQ=255) tGTTGGTATCGATGA‑CATGGTCAGCCCGGAGAAGAAACACGAAATCATCTCCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGAtt < 2:97669/298‑1 (MQ=255) gTTGGTATCGATGA‑CATGGTCATCCCGGAGAAGAAACACGAAATCATCTCCGAGGCAGAAGCAGAAGTTGCTGAAATTAAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACGCCGGTGCGCGTGGGTCTGCGGCACAGATTcagg > 2:336136/1‑298 (MQ=255) ggtaatgatgcactGGTCATACTGAAGAAGAAACACGAAATCGTCTCCGAGGCGGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCAAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGc < 1:69734/288‑1 (MQ=255) gaaTCGATGA‑AATGGTCAACCCGGAGAAGAAACACGAAATCATTTCCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGGAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCt < 1:459071/299‑1 (MQ=255) gA‑CATGGTCATCCCGGAGAAGAAACACGAAATCATCTCCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTAACGGTAAGGAAGAAAAGCAGGTTTCCTTACACAGCATCTAAATGATGGCCGACTCCGGTGCGAGTGGTTCTGCGGCACAGATTATG‑TAGCTTGCTGGtt > 2:367769/1‑300 (MQ=255) agaagaAACACGAAATCATCTCCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACCCCGGTGCGATGGGTTCGGCGGCCCAGAGTCGT‑CAGCTTGCTGGTAGGCGTGGTCTGAgggg > 1:367906/1‑300 (MQ=255) agaaACACGAAATCATCTCCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGTTCAGGAAGAGAAGCAGGTTTACTGCCACAGCATATACATGATGGCCGACTCTGGTTCGCGAGGTTCTGCGGC‑CCGGCTCGTGCAGCTTGCTGGTAGGCGGGGTTTGATGGCGa > 1:144574/1‑300 (MQ=255) acacGAAATCATCTCCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACCCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGGGGGGTCTGTTGGCGAAGCCg > 1:429185/1‑301 (MQ=255) tctcCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTTTCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCAAAGCATCTACATGATGGCAGACTCCGGTGACCGTGTTTTGGAGGAACAGGTTCGT‑CAGCTTGATGGTATCGGTGGTCTAATGGCGAATACGGCTGGCTCcat > 2:133688/1‑301 (MQ=255) ccGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCCACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCcctcat > 2:29426/1‑301 (MQ=255) agTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGTTGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCTT‑CAGCTTGCTGGTATGCGTGGTCTGTTGGCGATGCCGGATGGCTCCATCATCGAACCGCCACTcccc > 2:47449/1‑301 (MQ=255) tGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAATTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTTATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAAAAGCCTCGAAATGATGGCCGATATCGGTACGCGTGCTTCCGAGGCACAGATTAGT‑CAGCTAGCTGGTATGCGTGGTGTGGTGGGGAACGCGGTAGGCCCCTTCACGGAACCGGAAATCACtgcg > 2:108934/1‑301 (MQ=255) aaaaaTCAGGAGCAGTTCCAGTCTGGTCTGGAAATTGCGGGCGAACGCTACAAAAAAGTTATCGATATCTGGGAGGCGGCGAACGATCGTGGATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACt < 1:367672/300‑1 (MQ=255) gtCAGGAGCAGATCGAGTCTGTGCGGTTACAGGAGGACGAACTATACAAAAAAGGTAAGGATTACTCGGGTGTGGCGAACGATCGGTGATCCAAAGCGCTGATGGATAACCTGCAAACTGCAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCg < 1:436182/300‑1 (MQ=255) gggtAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTa < 2:154027/300‑1 (MQ=255) gCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGGTGCGGCGAACGATCGTTTATCCAAAGCGATGATGGATAACCAGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGAGGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCAtct < 2:144610/301‑1 (MQ=255) cTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTAAGCGTGGTCTTATGGCGAAGCCGGATGGCCCCATCAACGAAAAGCCAACCACCGCGAAATCCCGTGCAGGTCTGAACGTACCCCAGTCCTTCATCTCCCCCCCCggc > 1:425074/1‑300 (MQ=255) caaAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAgg < 2:395011/258‑1 (MQ=255) aGTAATCGATAGCGGTGTGGCGGCGAACGAGCGTGTGTCAGAAGCGATGATGGATAACCTGCAAACAGATGCCGTGATTAACCGTGACGGTCAGGAAGAGAAACAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTaaa < 2:199383/301‑1 (MQ=255) tATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAgg < 2:429296/300‑1 (MQ=255) atatCTGGGGTGGGGCGCGCGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGc < 1:166047/301‑1 (MQ=255) aaacggcggCTGCGGCGAAAGAGCGTGTAGTCAAGACGATGATGGAGAACCTGCAAACTGAAACCGGGATTAACCGTGACGGTCAGTAAGATAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTAGGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGc < 1:47437/294‑1 (MQ=255) aaacagggacgggacgAACGTTTGTGTAGCAAAAGCGATTATGGAGTACCTGAAAACTGAAAGCGTTATTTACCGTGACGGGCCGGAAGACAAGCAGGTTTCCTCCGACAGCGTCTTCATGCTGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGCCTCCATCATCGAAACGCCAATCACCGCGATCTTCCGTGAAGGTCTGAACGTACTCCAGTACTTTATTTCCACCCACGGTGCTCGTAAAGGTCTGGCg < 2:81758/287‑1 (MQ=255) atCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCgg > 2:454207/1‑301 (MQ=255) cgagcgttgacccAAAGCGATGATGGATAACCTGCAAACTGAGACCGTGATGAACCGTTACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACGGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACt < 1:454086/290‑1 (MQ=255) cGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATACCCACCCACGGTGCTCGTACAGGTCTGGCGGATACCGCACTGAAACCt > 1:63629/1‑301 (MQ=255) gtttCCAAAGCGATTATGGACAACCTGAGAAAGTAAACCTGTATGACCCGTGACGGTCAGGAATAACAGCAGGTTTCCTTCCAAAGCATCTACATGTTGGCCGACATCGGTAGGCGTGGTTCTTAGCCAACGATTCTA‑CCGCTTGCTGGGATGCGTCGTCTGAGGGAGAAGCCGGATGGCTCCATCATCGAAACTCCCATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAAc < 1:133655/297‑1 (MQ=255) tATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTTATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCCCCATCATCGAAACGCCAATCACCGCGCAATTCCGGGAGGGTCTGAACGTACCCCAGCACTTCATCTCCACCCCCGCTGCTCGTCACGGCCTGGCGGATCCCGCACTCACAACAGCGAAccc > 1:25988/1‑299 (MQ=255) caaagaccattgtgGATAGCCTGCGATCTGATCCCGTGATTATCCTGGACGGGCAGGAGGACACGCAGCTTTTCTTGCACCGCAGCTAGATGAGTGCCGACGCCTGTGCGCGTGGTTCTGCGGCACAGATCCGT‑CAGCTTGCTGGGATGCGTGGTCTTATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTCCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCgg < 1:49586/289‑1 (MQ=255) cGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCt < 2:368003/301‑1 (MQ=255) gCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCCCAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGCACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCAACCCACGGTGCTCGTAACgg > 2:353223/1‑243 (MQ=255) cAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGCCTGGTTg > 2:413634/1‑301 (MQ=255) aaaaCGGAAACCGTGATGAACCGGGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCAACGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTg < 2:425185/300‑1 (MQ=255) cTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGGAGCAGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCCCTGAAAACTGCACACTCCGGTTCCCTgctgctccggccggttgccgg > 1:308466/1‑281 (MQ=255) tGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTATGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACGTCATCTCCACCCACGGTTCTCGTAAAGGTCTGGCGGATACGGCACTGCAAACTGCGAACGCCGGTTACCTGCCTCGTAGTATGGtagtagtg > 2:136215/1‑294 (MQ=255) gacaCCGTGAGTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACAGGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTgg < 2:345122/298‑1 (MQ=255) aaaCCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTATAGGTCTGGCGGCTACCGCCTTGAAAACTGAGCACCCCggagagcggtctcgcgtcctgtcaggagagcg > 1:257532/1‑271 (MQ=255) aaaCCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCgg < 2:257608/271‑1 (MQ=255) gATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTTACTCGTCGCCTGGTTGACGTGGCACAGGAc > 1:178767/1‑301 (MQ=255) gATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGGCTGGCGGATACCGCCCTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGgcccgggcc > 1:43129/1‑294 (MQ=255) ccGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGAGACCGCACTGAAAACTGCGCACTCCGGTTACCTGACTCGTCGTCTGGCTGACGTGGCGCAGGACCtggtg > 1:371342/1‑301 (MQ=255) gAAGAGAAGCAGGTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGGGCAGGTCTGAACGTACTCCAGTACTTCATCCCCACCCACGGTGCCCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGCACTCCGGTTACCTGAACCGTCCTCTGGTTGACGTTGCGACGGCCGTGGGGGTTTCCGAAGACg > 1:368/1‑301 (MQ=255) ggTTTCCTTCCACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTAcc > 2:312398/1‑301 (MQ=255) | CCAGATCATGTACACCGGCTTCGCCTATGCAGCGCGTTCTGGTGCATCTGTTGGTATCGATGA‑CATGGTCATCCCGGAGAAGAAACACGAAATCATCTCCGAGGCAGAAGCAGAAGTTGCTGAAATTCAGGAGCAGTTCCAGTCTGGTCTGGTAACTGCGGGCGAACGCTACAACAAAGTTATCGATATCTGGGCTGCGGCGAACGATCGTGTATCCAAAGCGATGATGGATAACCTGCAAACTGAAACCGTGATTAACCGTGACGGTCAGGAAGAGAAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCGGCACAGATTCGT‑CAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACCCACGGTGCTCGTAAAGGTCTGGCGGATACCGCACTGAAAACTGCGAACTCCGGTTACCTGACTCGTCGTCTGGTTGACGTGGCGCAGGACCTGGTGGTTACCGAAGACGATTGTGGTACC > NC_000913/4187215‑4187797 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |