New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1570598 =	66 (1.080)	3 (0.050) +CCGTTACCGTTAAAC	3/542	8.0	5.1%	intergenic (‑109/+47)	gadC/gadB	glutamate:gamma‑aminobutyric acid antiporter/glutamate decarboxylase B, PLP‑dependent
	?	NC_000913	3666176 =	53 (0.870)					intergenic (‑366/+4)	gadX/gadA	acid resistance regulon transcriptional activator; autoactivator/glutamate decarboxylase A, PLP‑dependent
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

ATTGATTGATAAATAAATTTAAACGAAGCGGGAGAACAGGATGATAATGTGTGATGTTCTACGGGCAGGATGACTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAACCTGCCAGCCGCGCAGACGCAGACGTTCAGAGAGGTCGTACAGGGTGTATCCCGGATCTTCACCATCTTTCAGTTTGAAGCAAACCGCCGG  >  NC_000913/3665877‑3666455                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                          agccaccttccaatcaatTTAAAAGAAGCGGGAGAAACGGATGATAATGTTTAATTTTCTACGAGCAAGCTGACTTGATTCATAATACAAAAACGTGTTTAATAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttatgt                                                                                                                                                                                                                                                                                          <  2:299070/290‑1 (MQ=255)  acacgacgctcttcgatctAAACGAAGCGGGAGAAAAGGATTATAATGTGTGATGTTCTACGGGCAGGATGACTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttatg                                                                                                                                                                                                                                                                                           <  2:354357/281‑1 (MQ=255)     attgatAAATAAATTTAAACGAAGCGGGAGAACAGGATGATAATGTGTGATGTTCTACGGGCAGGATGACTGGATTTATAATACAAAAACGTG‑TTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTTCGATTAATAAGCAACCGAATGCCAAGCTGTTTTTTTAAAGTCTGGGCATTCGGTTTTTACAACgttatgttttt                                                                                                                                                                                                                                                                                      >  2:18106/1‑297 (MQ=255)       agatAAATAAAATTAAACGAAGCGGGAGAACATGATGATAATGTGTGATGTTCTACGGGCAGGATGACTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAg                                                                                                                                                                                                                                                                                    <  1:16341/300‑1 (MQ=255)            aataaatTTAAAGGAAGAGGGAGAACAGGATGATAATGTGTGATGTTCTAAGGGCAGGATGACTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGgtgtg                                                                                                                                                                                                                                                                               <  1:142825/301‑1 (MQ=255)            aataaatTTAAACGAAGCGGGAGAACAGGATGATAATGTGTGATGTTCTACGGGCAGGATGACTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAAAATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTATTTTACATGCGGGGCTTCCGTTTTTTACACCGTAATGTTATCAgtagtg                                                                                                                                                                                                                                                                               >  1:273160/1‑296 (MQ=255)                 atTTAAACGAAGCGGGAGAACAGGATGATAATGTGTGATGTTCTACGGGCAGGATGACTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGACCAGCTGTTTTTTTACAGGATGGGAATTCGGTTTTTACAACgtgatgtagatcgaaaaagcac                                                                                                                                                                                                                                                                           >  1:299153/1‑285 (MQ=255)                     aaaCGAAGCGGGAGAACAGTATGATAATGTGTGATGTTCTACGGGAAGGATGACTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGc                                                                                                                                                                                                                                                                       <  1:373448/300‑1 (MQ=255)                     aaaCGAAGCGGGAGAACAGGATGATAATGTGTGATGTTCTACGGGCAGGATGACTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACgttatg                                                                                                                                                                                                                                                                                           >  1:354446/1‑280 (MQ=255)                                gagaACAGGATGATAATGTGTGATGTTCTACGGGTAGGATGACTGGATTTATAATACAAAAACGTGTTTAAGAACAAAGGGAAATTATTAGTAAGCAAATAATCATTTTTCGTGACATTAAAGGTAATCGCTACATTTAATACACATTCCTATAACATATATCTTATCAATAAGATGAACAGCCAGCCAATATATTATTGCGATTAATCAGCAACCGAATACCCAGCTGTGTTTTTATAGATTGGGCATTTGGTTTTTCCAATGTTTTGTTTCAAGGTATGGTTAAAGCTGtttgtctggg                                                                                                                                                                                                                                                           >  2:226919/1‑293 (MQ=255)                                                  tttgATGTTCTAAGGGCAAGATTACTTAATTTATAATAAAAAAACTTGTTTAAGAAAACAGGGAAATTAAAAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCAGGGTATTGCCcagcagaaca                                                                                                                                                                                                                                          <  2:177817/298‑5 (MQ=255)                                                             ttccccacacgacgctctgccgaactaCAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGc                                                                                                                                                                                                                               <  2:159919/274‑1 (MQ=255)                                                                ggCAGGATGACTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACAGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTATGCTGGGTAATACCTTGCAGTTTCGGGG‑GCTCGCTg                                                                                                                                                                                                                             >  1:389259/1‑298 (MQ=255)                                                                       tGACTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATAccc                                                                                                                                                                                                                                                   >  2:8033/1‑270 (MQ=255)                                                                       tGACTGGATTTATAATAAAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATAccc                                                                                                                                                                                                                                                   <  1:8033/270‑1 (MQ=255)                                                                          cTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCGGAGATATTTCAggg                                                                                                                                                                                                                >  2:187179/1‑301 (MQ=255)                                                                                       aCAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGTT‑GATCGc                                                                                                                                                                                                                               >  1:159959/1‑273 (MQ=255)                                                                                           aaaCGTGTTAAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCGTTTCGTGACATTAAAGGTAATCGCTACATTTAAAAAACATTCATATAACATATATCTTATCAACACGATGAAGAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTcc                                                                                                                                                                                               <  1:323058/301‑1 (MQ=255)                                                                                              cGTGATTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGc                                                                                                                                                                                            <  1:370466/301‑1 (MQ=255)                                                                                                    tAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGGTATCCGTTGTGTTTAAAGCGGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GCTCGCTGAGATATTTCAGGGAGGCTTTGTAGTTTTCCACCAAAAGt                                                                                                                                                                                      >  2:115685/1‑301 (MQ=255)                                                                                                    tAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATATTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTAAAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACACTGAAGTTTCGGGG‑GATCGCTGAGCTATTTAAGGGAGGCTTTGTAGTCTTCCAGAAACGGt                                                                                                                                                                                      >  1:336031/1‑301 (MQ=255)                                                                                                              gggAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCCATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTCTCAAAACGCTATGTTATCAGGTGTGTTTAAAGCTGTTATACTTGGCATTACCCTGCAGTTTCGGTTAGAT‑GGTGAGATTTTTCGGGGTGGCTTTGTAGTCTGCTAGTAACAGTCCAGCaaaa                                                                                                                                                                             >  2:302607/1‑299 (MQ=255)                                                                                                                   aTTAATAGTAATCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCAtt                                                                                                                                                                       <  1:187231/301‑1 (MQ=255)                                                                                                                         attAAGCAAATAATACCTTTTCTTGACATTAAAGGTAATCGCTACAATTAATAACAATACATATAACAAATATCTTATCAACACTATGACTAGACAGCCAATATAGTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGTCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAg                                                                                                                                                                 <  1:226983/299‑1 (MQ=37)                                                                                                                                   taatCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGGTATGTTAGCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTGCGGTT‑GATTGCTGAGATATTGCAGGGAGGCGTTGTAGTTTTCCAGTAACTGTTCAGCTAATTCCATTTCTAATCTGCgacgac                                                                                                                                                       >  2:93374/1‑301 (MQ=255)                                                                                                                                       cccTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGt                                                                                                                                                                                                       <  2:280158/249‑1 (MQ=255)                                                                                                                                       cccTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGt                                                                                                                                                                                                       >  1:280238/1‑249 (MQ=255)                                                                                                                                                       aaaGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCAAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑Cg                                                                                                                                  >  2:208346/1‑301 (MQ=255)                                                                                                                                                           gTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACACTGCAGTTTCGGGT‑GATGGCTGAGATATTTAAGGTAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATcaccagtgtgt                                                                                                                               >  2:476614/1‑295 (MQ=255)                                                                                                                                                                 acaaaatataataaACATTCAGAAAACATATATCTTATCAACACGATAAATAGAAAGCCAAAATATGATTGCGAGTAATAAGCAACCTAATGCCAAGCTGTTTTTTAAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTATCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGACTTCCAACAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTgg                                                                                                                        <  1:302691/293‑1 (MQ=21)                                                                                                                                                                                    cATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGCTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACAGAATGCGCATAACCC‑CGATGTCGGTTGCTTCAcctccgcacgtga                                                                                                      >  2:231374/1‑293 (MQ=255)                                                                                                                                                                                      tataACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCCGCAAAGTCCATTTAGAACCCGCGAAGACAAATAATGCGCATCACCA‑CGATCACGGGGGGTTCACCGCCGAGAGGGCAgg                                                                                                   >  2:493699/1‑301 (MQ=25)                                                                                                                                                                                         aaCATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGGTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCAGGGCAATACCCTGCAGGTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCATCAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAAGGCGCAT‑ACCATCGATATGGGATGCTTcgccgcgcagtgagctggccg                                                                                                >  2:57322/1‑286 (MQ=25)                                                                                                                                                                                          aCATAAATCTTGCCAACAGTTTGATTAGACAACACATATATTATTGCGATTCATAAGCAACCGAATGCCCGTCTGTTTTTGTAAAGGCTGGGCTGTAGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCgg                                                                                               <  2:196059/301‑1 (MQ=17)                                                                                                                                                                                           cATATATCTTATCAACACGATTAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGa                                                                                              <  1:476728/301‑1 (MQ=255)                                                                                                                                                                                             acaatCTTATCAACACAATGAATAGACATCCAATATATGATTTCGATTAATAAGCAACCTAATTCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAAc                                                                                            <  1:493820/298‑1 (MQ=255)                                                                                                                                                                                                           acGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGACGCGACGACACATAATGCGCATCACCA‑CGATGTCGCTGGCTTCACCGCCGCGAGTGAAGGCCGGAACCTGCCACgcgcgc                                                                               >  2:366578/1‑300 (MQ=255)                                                                                                                                                                                                            cGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGTATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAACCTGCCAGCCGcgcag                                                                             <  1:115708/301‑1 (MQ=255)                                                                                                                                                                                                                          ccAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTAAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGAGGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAACATGCACGCCGCGCAGACGCAGACGttaa                                                                >  1:92458/1‑298 (MQ=255)                                                                                                                                                                                                                                         agttAATAAGCAACCGAATGCCCAGCTGTTTTGTTAAAGGCTGGGCATTCGGTTTTTGCAACGTTCTTTTTTCAGGTGTTTTTAAAGCTGTTCTGCTTGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAGGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAACCTGCCAGCCGCGCAGACGCAGACGTTCAGAGAGGTCGTACAggg                                                <  2:403138/299‑1 (MQ=255)                                                                                                                                                                                                                                            taataaGCAAGTGAAGTCCCAGGGGTTTATTTAAATGATAGGCATTTGGTTGTTACAGCGTAATTGTAACAGGTGTGTTGAAAGCAGTGCTGCGGGGCAATACCCTGCAGTTTCGGGT‑GATCGAAGAGATATTTCAAGGAGGCATTGGAATCTTCCAGCAACAGTGCATCAAAGTCCATATCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAACCTGCCAGCCGCGCAGACGCAGACGTTCAGAGAGGTCGTACAGGgtg                                              <  1:263396/300‑1 (MQ=14)                                                                                                                                                                                                                                                 aGCAACCGAATGCCCAGCTGTTTTTTTAAAGTCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCTGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑AGATGTCGGTGCCTTCACCGCCGATAGAGAATGCCGGAACCTACCAGCCGAGCAGACGCCGACTTCCAGAGATGTCATACAGGGTGCGTccc                                        >  1:66742/1‑301 (MQ=17)                                                                                                                                                                                                                                                  gCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAACCTGCCAGCCGCGCAGACGCAGACGTTCAGAGAGGTCGTACCGGGTGTATCCCg                                       >  1:557669/1‑301 (MQ=255)                                                                                                                                                                                                                                                      ccGAATGCCCAGCTTGTTTTTTAAAGGCTGGGCATTCGGTTTTTAAAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCGGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAACCTGCCAGCCGCGCAGACGCAGACGTTCAGAGAGGTCGTACAGGGTGTATCCCGGATc                                   <  1:18108/301‑1 (MQ=255)                                                                                                                                                                                                                                                                     ctcttccgttctcTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTGCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAACCTGCCAGCCGCGCAGACGCAGACGTTCAGAGAGGTCGTACAGGGTGTATCCCGGATCTTCACCATCTTTc                      <  2:560659/287‑1 (MQ=255)                                                                                                                                                                                                                                                                          ttAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCAACA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGGACCTGCCAGCCGCGCAGCCGCCGCAGTTCAGAGAGGTCGTACAGGGTGTATCCCGGATCTTCACCAGCTTTCCGtttt                >  2:80232/1‑299 (MQ=255)                                                                                                                                                                                                                                                                           aaattggttggtgttCTGTTTTTACAATATTTTGTTATCAGTGTTCTTTAAGTCTTTGCTTCTTGGCACTACCCTTCCGTTTCGGGT‑GATCGCTGAGATATTTCAGGGGGGCTTTGGAGGCTTCCAGAAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACAAAATGCGCATCACCA‑CGATGGCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAACCTGCCAGCCGCGCAGACGCAGACGTTCAGAGAGGTCGTACAGGGTGTATCCCGGATCTTCACCATCTTTCAGTTTGaa              <  2:389167/288‑1 (MQ=11)                                                                                                                                                                                                                                                                             aaGGCTGGGTATTCGGTTTTTACAACTTTATGTTATCAGGTGGGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAACCTGCCAGCCGCGCAGACGCAGACGTTCAGAGAGGTCGTACAGGGTGTATCCCGGATCTTCACCATCTTTCAGTTTGAAGc            <  1:208403/301‑1 (MQ=255)                                                                                                                                                                                                                                                                             aaGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAACCTGCCAGCCGCGCAGACGCAGACGTTCAGAGAGGTCGTACAGGGTGTATCCCGGATCTTCACCATCTTTCAGTTTGAAGc            <  1:80247/301‑1 (MQ=255)                                                                                                                                                                                                                                                                                 cTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAACCTGCCAGCCGCGCAGACGCAGACGTTCAGAGAGGTCGTACAGGGTGTATCCCGGATCTTCACCATCTTTc                      >  1:560791/1‑287 (MQ=255)                                                                                                                                                                                                                                                                                 cTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGCCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAACCTGCCAGCCGCGCAGACGCAGCCTTTCAGAGAGGTCGGACACGGTGTACCCCGGACCTCCACCATCTTTCAGGTTGAAGCAAAc        >  2:239323/1‑301 (MQ=255)                                                                                                                                                                                                                                                                                       aTTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAACCTGCCAGCCGCGCAGACGCAGACGTTCAGAGAGGTCGTACAGGGTGTATCCCGGATCTTCACCATCTTTCAGTTTGAAGCAAACCGCCgg  <  1:93393/301‑1 (MQ=40)                                                                                                                                                                                                                                                                                       aTTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGGGGCTTCACCGCCGAGAGTGAAGGCCGGAACCTGCCAGCCGCGCAGACGCAGACGTTCAGAGAGGTCGTACAGGGTGTATCCCGGATCTTCACCATCTTTCATTTTGAAGCAAACCGCCgg  >  2:427412/1‑301 (MQ=255)                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                          ATTGATTGATAAATAAATTTAAACGAAGCGGGAGAACAGGATGATAATGTGTGATGTTCTACGGGCAGGATGACTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATAACATATATCTTATCAACACGATGAATAGACAGCCAATATATTATTGCGATTAATAAGCAACCGAATGCCCAGCTGTTTTTTTAAAGGCTGGGCATTCGGTTTTTACAACGTTATGTTATCAGGTGTGTTTAAAGCTGTTCTGCTGGGCAATACCCTGCAGTTTCGGGT‑GATCGCTGAGATATTTCAGGGAGGCTTTGTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTCGAAGCCGCGACGACACATAATGCGCATCACCA‑CGATGTCGGTGGCTTCACCGCCGAGAGTGAAGGCCGGAACCTGCCAGCCGCGCAGACGCAGACGTTCAGAGAGGTCGTACAGGGTGTATCCCGGATCTTCACCATCTTTCAGTTTGAAGCAAACCGCCGG  >  NC_000913/3665877‑3666455

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.