Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1196320	1211467	15148	25 [24]	[24] 25	[icd]–[icdC]	25 genes [icd], ymfD, ymfE, lit, intE, xisE, ymfI, ymfJ, cohE, croE, ymfL, ymfM, oweE, aaaE, ymfR, beeE, jayE, ymfQ, stfP, tfaP, tfaE, stfE, pinE, mcrA, [icdC]

TTTAGTCATCTAACTAATGCTGCGCCATATGGGTTGGACTGAAGCGGCTGACCTGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACACTCTT  >  NC_000913/1211397‑1211768                                                                         |                                                                                                                                                                                                                                                                                                             tctcgtgcgttagaggatgcgtcgcCATCTGGGGTGGCGTCAAGGGGCTGACCTGATTGTTAAAGGTAGG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATg                                                                          <  2:106022/278‑1 (MQ=255)  ccttccgcttggatgaTGGTGTGCCATATGGGTTGGACTGAAGAGGCTAACCTGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATggg                                                                        <  2:311629/286‑1 (MQ=255)          tgagatgaTGCTGCGCCATATGGGTTGGACTGAAGCGGCTGACCTGATTGTTAAAGGTATG‑GAAGGAGCAATCAATGCCAAGACCGTAAATTATGACATCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGACAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGAATAACACACCCGGTGTTGTATTGATGGAGATAATATTAAGAGCAAATCGAGCAAATTTATACGAAGACCATTATATGAgtacaaaagggaaaaattt                                                                >  1:304264/8‑283 (MQ=255)           gccgatctgctgcGCCAGATGGGTTGGACTGAAGCGGCTGACCTGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATAtttt                                                                <  1:444301/293‑1 (MQ=255)            ggaggtggctgcGCCATATGGGTTGGGCTGGAGCGGCTGACATGATTGTTAAA‑GTGTGTGAATGCGCAATCAATGCCAAGACCGTAACTTATGATGTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTta                                                              <  2:127874/294‑1 (MQ=255)                gaTGCTGCGCCATATGGGTTGGACTGAAGCGGCTGACCTGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTTAAACGGGCGTATAACACGACCGTTGTTTTATTTATGTGGATATTATTAATAGCATAGCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTtatatt                                                          >  1:333883/2‑299 (MQ=255)                 aTGCTGCGCCATATGGGTTGGACTGAAGCGGCTGACCTGATTGTTAAAGGTATG‑GAAGGAGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTACAGAGTTTGGTGAAGCGATAATCGAAAACATGTAATCTTTCCATGTGTTCAAGATTGAAATGGGTGTAGAACAAGCACGTTGTTTTTGTTTTGTCGTTATTATTAATAGATTTTCACTGATATTTATATTAACACTATGAATTTAGTGCATAGGGGCGTATTTTTTTAAtt                                                         >  2:195425/1‑300 (MQ=255)                   gctgcGCCATATGGGTTGGACTGAAGCGGCTGACCTGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCTAAAACATGTAATCTCTCCATGTGTTAAATATTGACACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCTAAAGGGCATAtttt                                                                >  2:444193/1‑292 (MQ=255)                              tGGGTTGGACTGAAGCGGCTGACCTGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTATTAGCATATAGACCATATTTATATGAAGCCCATTACTTGAGCACATATGGGCATATTTTTATAATGCAATTATTATGtt                                            >  2:229443/1‑300 (MQ=255)                               gggTTGGACTGAAGCGGCTGACCTGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGAACGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCCTCGAAAACATGTAATCTATCAATGTGTTAAATATTGAAACGGGCGTATAACAAGCACGTTGATTTATATATGTGGATATTATTAATAGCATATCTATCATATTTATATAAACCCCATTCATTACACCTATATGGGTATATTTTGTTATTGCAACtattaatta                                            >  2:299238/1‑296 (MQ=255)                                      aCTGAAGCGGCTGACCTGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGCAAACATGTAATCTCTGCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATTTGGATATTATTAATATCATATCTAGCATATTTATTTGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATATGGCAACTATTTTTTAACCatttt                                    >  2:368565/1‑300 (MQ=255)                                        tGAAGCGGCTGACCTGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATTCAACTATTATGTAAACatttatt                                  >  2:277988/1‑301 (MQ=255)                                                cTGACCTGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATTAAGCCCATTACTTTATCCCTTATGGGCATCTTTTTATAATGCAATTATTATGTAAAATTTTAtttttttttt                          >  2:468464/1‑301 (MQ=255)                                                     cTGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGc                                                                                              <  2:172669/228‑1 (MQ=255)                                                     cTGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGc                                                                                              >  1:172714/1‑228 (MQ=255)                                                      tGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCat                                                                             <  1:541600/244‑1 (MQ=255)                                                      tGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCat                                                                             >  2:541470/1‑244 (MQ=255)                                                      tGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGAATATAGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAATATTTATTTGTTATTTTGCttt                    >  1:25289/1‑301 (MQ=255)                                                       gATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGCAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGTATATTTATATGAAGCCCATTACTTGAACCCATATGGGAATATTTTTATAATTCAACTAATATGTAATCATTTATTTGTTCTTTTGttttt                   >  2:331668/1‑300 (MQ=255)                                                             aaaaTGTATG‑GAAGTCGAAATCAATTGCAAGACCGGAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGGTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTgg             <  1:509447/300‑1 (MQ=255)                                                                  gTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGTATATTATTAATAGCATATCAAGCATATTTATATGATGCCAATTATTTTAGCCCATATGGGCATATTTTTATATTGCATCTATTATGTCAACATTTATTTGTTATTTTTCTTtatctttgtcga         >  1:44265/1‑292 (MQ=255)                                                                      g‑gAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAATTATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGTATCTTTTTATAATTCAACTATTATTTAAACATTTATTTGTTATTTTGTTTTCTCCTggtatacccgc    >  2:512846/1‑292 (MQ=255)                                                                      g‑gAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACAct     <  2:398847/300‑1 (MQ=255)                                                                      g‑gAAGGCGCAATCAAATCGAACACGTTACCTTATGACTTGTATCTTCTGAAGGAATCCCCTAAACTGCTGAAATGTTCATATTTTGGTGAAGCTATCATCGAAAACATGTAATCTCTCCATTTTTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGTATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACAct     <  2:157594/300‑1 (MQ=255)                                                                         aaGGAGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACACTCtt  <  1:278068/301‑1 (MQ=255)                                                                         |                                                                                                                                                                                                                                                                                                             TTTAGTCATCTAACTAATGCTGCGCCATATGGGTTGGACTGAAGCGGCTGACCTGATTGTTAAAGGTATG‑GAAGGCGCAATCAATGCCAAGACCGTAACTTATGACTTCGAACGTCTGATGGAAGGCGCTAAGCTGCTGAAATGTTCAGAGTTTGGTGAAGCGATCATCGAAAACATGTAATCTCTCCATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTTATTTATGTGGATATTATTAATAGCATATCGAGCATATTTATATGAAGCCCATTACTTGAGCCCATATGGGCATATTTTTATAATGCAACTATTATGTAAACATTTATTTGTTATTTTGCTTTCTCCTGGAGGACACTCTT  >  NC_000913/1211397‑1211768

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑