New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3670423 =141 (1.190)115 (0.980) 69/298 0.3 44.6% coding (832/1650 nt) treF cytoplasmic trehalase
?NC_000913 = 3873421 146 (1.250)coding (192/618 nt) dgoA 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase

Only 100 of 256 total aligned reads displayed.

CAACCGCACCTATTATTTGAGCCGCTCGCAACCACCGGTTTTTGCGCTGATGGTGGAGTTGTTTGAAGAAGATGGTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGATTACTCTTCCCGTTGGCTGCGTGATACTGGTCGTCTGGCGAGCATTCGTACCA  >  NC_000913/3670230‑3670621
                                                                                                                                                                                                 |                                                                                                                                                                                                      
cAACCGCACCTATTATTTGAGCCGCTCGCAACCACCGGTTTTTGCGCTGATGGTGGAGTTGTTTGAAGAAGATGGTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCgc                                                                                                                                                                                                  <  1:341142/200‑1 (MQ=255)
                   aGCCGCTCGCAACCACCGGTTTTTGCGCTGATGGTGGAGTTGTTTGAAGAAGATGGTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGa                                                                                                                                                                               <  1:582041/200‑1 (MQ=255)
                   aGCCGCTCGCAACCACCGGTTTTTGCGCTGATGGTGGAGTTGTTTGAAGAAGATGGTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGa                                                                                                                                                                               <  1:671528/200‑1 (MQ=255)
                                          ggcttcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCGGcgtgccg                                                                                                                                                        <  1:902123‑M1/49‑4 (MQ=255)
                                              tcggtcgccgtcgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGa                                                                                                                                                                                                      >  4:638004‑M1/148‑150 (MQ=255)
                                                  tggtggAGTTGTTTGAAGAAGATGGTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCgc                                                                                                                                                                                                  >  4:486903/1‑150 (MQ=255)
                                                    gtggAGTTGTTTGAAGAAGATGGTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCt                                                                                                                                              <  1:317744/200‑1 (MQ=255)
                                                     tggAGTTGTTTGAAGAAGATGGTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGNNNATGCCGGACGGATCgctgc                                                                                                                                                                                               <  4:698400/150‑1 (MQ=255)
                                                         cgcgcagccggggcagacggtcatgccgtagcccaccgcacggcggatcacttcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATc                                                                                                                                                                                                    >  2:431575‑M1/137‑141 (MQ=255)
                                                            gttTGAAGAAGATGGTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACg                                                                                                                                      >  1:509432/1‑200 (MQ=255)
                                                                   gaagaTGGTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAAc                                                                                                                               <  1:179677/200‑1 (MQ=255)
                                                                    ggcagacggtcatgccgtagcccaccgcacggcggatcacttcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCgc                                                                                                                                                                                                  >  3:14217‑M1/126‑132 (MQ=255)
                                                                    aagaTGGTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTggg                                                                                                                                                                                >  4:257231/1‑150 (MQ=255)
                                                                         ggTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTc                                                                                                                                                                                             >  3:609294/1‑132 (MQ=255)
                                                                         ggTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGaa                                                                                                                         >  1:360638/1‑200 (MQ=255)
                                                                         ggTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGCACGGATCGCTGCTCAACCGTTACTGGGACGAt                                                                                                                                                                           >  4:765514/1‑150 (MQ=255)
                                                                          cggtcatgccgtagcccaccgcacggcggatcacttcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACt                                                                                                                                                                                   <  2:618268‑M1/22‑1 (MQ=255)
                                                                           tgtACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATcg                                                                                                                                                                         <  4:13901/150‑1 (MQ=255)
                                                                            gtcatgccgtagcccaccgcacggcggatcacttcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACa                                                                                                                      <  1:525152‑M1/83‑1 (MQ=255)
                                                                                  ccgtagcccaccgcacggcggatcacttcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtccctGGATCGCTGCTCAACCGTTACTGGGacgtt                                                                                                                                                                           <  2:814159‑M1/30‑3 (MQ=255)
                                                                                          ccgcTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGa                                                                                                                                                          >  4:541294/1‑150 (MQ=255)
                                                                                               aTCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATcgcg                                                                                                                                                                       >  3:217368/1‑132 (MQ=255)
                                                                                               aTCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACAcgccgc                                                                                                                                                              >  2:597703/1‑141 (MQ=255)
                                                                                               aTCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAAt                                                                                                                                                     >  4:10910/1‑150 (MQ=255)
                                                                                                   gcggatcacttcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAgg                                                                                               <  1:767397‑M1/106‑1 (MQ=255)
                                                                                                   cGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAgg                                                                                               <  1:735231/200‑1 (MQ=255)
                                                                                                      gatcacttcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCt                                                                                                                                              <  4:567742‑M1/59‑1 (MQ=255)
                                                                                                      gatcacttcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCt                                                                                                                                              >  4:451478‑M1/92‑150 (MQ=255)
                                                                                                        tcacttcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGCTCGCGCCACGCCGCGTGACGAATCCTGGCTTg                                                                                                                                            <  4:785728‑M1/61‑1 (MQ=255)
                                                                                                        tcacttcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAAt                                                                                                                                                     <  2:183066‑M1/52‑1 (MQ=255)
                                                                                                         ccTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTTCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCCCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCTAAACATTCCAGTCTCCCGCCCAACGAGGTGTAcc                                                                                         >  1:829991/1‑200 (MQ=255)
                                                                                                         ccTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTAcc                                                                                         >  1:852147/1‑200 (MQ=255)
                                                                                                         ccTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTAcc                                                                                         >  1:436521/1‑200 (MQ=255)
                                                                                                         ccTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTAcc                                                                                         >  1:840122/1‑200 (MQ=255)
                                                                                                         ccTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCGGGTCGCCCGCCCACCGAGGTGTAcc                                                                                         >  1:626571/1‑200 (MQ=255)
                                                                                                           cttcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTg                                                                                                                                                           <  3:664907‑M1/46‑1 (MQ=255)
                                                                                                           cttcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCt                                                                                                                                                  <  2:800077‑M1/55‑1 (MQ=255)
                                                                                                           cttcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAgg                                                                                                                                         <  4:443889‑M1/64‑1 (MQ=255)
                                                                                                             tcactatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGAc                                                                                                                                       >  4:890219‑M1/85‑150 (MQ=255)
                                                                                                              aaaTGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGc                                                                                                                                               <  2:96967/141‑1 (MQ=255)
                                                                                                               aaTGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCt                                                                                                                                              <  2:117687/141‑1 (MQ=255)
                                                                                                                ctatggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGAttt                                                                                  <  1:278148‑M1/119‑1 (MQ=255)
                                                                                                                  atggatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgtcctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATc                                                                                                                                                    <  3:163154‑M1/53‑1 (MQ=255)
                                                                                                                     gatattgggcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAAc                                                                                                                               <  4:842855‑M1/74‑1 (MQ=255)
                                                                                                                        tGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCt                                                                                                                                              <  3:426801/132‑1 (MQ=255)
                                                                                                                         gCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACcgcg                                                                                                                           >  4:494192/1‑150 (MQ=255)
                                                                                                                           cTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGCATCCTGGCTTGa                                                                                                                                           >  3:656400/1‑132 (MQ=255)
                                                                                                                           cTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGaa                                                                                                                         >  4:742888/1‑150 (MQ=255)
                                                                                                                           cTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGaa                                                                                                                         >  4:64540/1‑150 (MQ=255)
                                                                                                                             tCTGGATGGACGGTGCAGAATCGATAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAgg                                                                                                                                         <  3:340344/132‑1 (MQ=255)
                                                                                                                             gcgtaacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGaaa                                                                                                                                <  2:483902‑M1/73‑1 (MQ=255)
                                                                                                                              cTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGa                                                                                                                                        >  3:574468/1‑132 (MQ=255)
                                                                                                                                taacgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGcc                                                                  >  1:102562‑M1/66‑200 (MQ=255)
                                                                                                                                ggatggaCGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACTGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCGAGAGGACGTTGGAACcg                                                                                                                             >  2:570704/1‑141 (MQ=255)
                                                                                                                                ggatggaCGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACAtt                                                                                                                    >  4:277151/1‑150 (MQ=255)
                                                                                                                                ggatggaCGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGcc                                                                  <  1:37418/200‑1 (MQ=255)
                                                                                                                                  acgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGtt                                                                                                                                    <  3:71205‑M1/69‑1 (MQ=255)
                                                                                                                                  acgatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCt                                                                                                                  <  4:386001‑M1/87‑1 (MQ=255)
                                                                                                                                    ggaCGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGCGGACGTTGa                                                                                                                                  >  3:791915/1‑132 (MQ=255)
                                                                                                                                    ggaCGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCg                                                              >  1:445426/1‑200 (MQ=255)
                                                                                                                                    gatgagctgacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTgg                                                                                                                >  4:83542‑M1/62‑150 (MQ=255)
                                                                                                                                     gaCGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGGACCCGCGaac                                                                                                                        >  2:852819/1‑140 (MQ=255)
                                                                                                                                         ntGCAGAATCNNNNNNCCCTAATCNGGNCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAANNNNNTGGTcgcc                                                                                                           >  4:528766/2‑150 (MQ=255)
                                                                                                                                         gTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCTCGTGACGAATCCTGGCTTGAGGACGTTGATACcg                                                                                                                             >  3:394783/1‑132 (MQ=255)
                                                                                                                                         gTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACAtt                                                                                                                    >  2:506368/1‑141 (MQ=255)
                                                                                                                                            gacagcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGAt                                                      >  1:683535‑M1/54‑200 (MQ=255)
                                                                                                                                             aGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGAtt                                                     <  1:541346/200‑1 (MQ=255)
                                                                                                                                                gcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACa                                                                                                                      <  3:178306‑M1/83‑1 (MQ=255)
                                                                                                                                                gcccatcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGATTAnt                                                  <  1:899760‑M1/151‑1 (MQ=255)
                                                                                                                                                  cGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGATTActct                                                >  1:382686/1‑200 (MQ=255)
                                                                                                                                                    atcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTcgcccg                                                                                                         <  2:261156‑M1/96‑1 (MQ=255)
                                                                                                                                                    atcctggcgagcgcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTcgcccg                                                                                                         <  2:370636‑M1/96‑1 (MQ=255)
                                                                                                                                                       aTCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGt                                                                                                               <  3:629182/132‑1 (MQ=255)
                                                                                                                                                        tCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCTTGACGCATCCTGGCTTGAGGACGTTGAAACCGCGAAACAGTCTGGTc                                                                                                              >  3:308285/1‑132 (MQ=255)
                                                                                                                                                             aaTCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCACCGAGGTGTACcgc                                                                                       >  4:211548/1‑150 (MQ=255)
                                                                                                                                                             aaTCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACcgc                                                                                       >  4:149805/1‑150 (MQ=255)
                                                                                                                                                             aaTCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACcgc                                                                                       >  4:351096/1‑150 (MQ=255)
                                                                                                                                                             aaTCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCCTGAGGACGTTGAAACCGCGAAACATTCTGGTcgcccg                                                                                                         >  3:544471/1‑132 (MQ=255)
                                                                                                                                                                gcatcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGCGGTGTACCGCGAt                                                                                    <  4:114000‑M1/117‑1 (MQ=255)
                                                                                                                                                                 catcgacctgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCa                                                                                                     <  3:582270‑M1/100‑1 (MQ=255)
                                                                                                                                                                  ggCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTa                                                                                           >  2:16314/1‑141 (MQ=255)
                                                                                                                                                                      acctgtacaggtttcagtaccgtacctGGATCGCGGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACcgc                                                                                       >  2:713037‑M1/28‑141 (MQ=255)
                                                                                                                                                                      acctggtcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGATTACTCTTCCCGTTGGCTGCGTGATAc                            >  1:221139‑M1/28‑200 (MQ=255)
                                                                                                                                                                         tgttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGATTACTCTTCCCGTTGGCTGCGTGATACTgg                         >  1:265758‑M1/25‑200 (MQ=255)
                                                                                                                                                                         cGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTAcgcgcg                                                                           >  4:633805/1‑150 (MQ=255)
                                                                                                                                                                          gttcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGgtgt                                                                                            <  3:808523‑M1/109‑1 (MQ=255)
                                                                                                                                                                           ccATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGATTACTCTTCCCGTTGGCTGCGTGATACTGgtc                       >  1:924992/1‑200 (MQ=255)
                                                                                                                                                                            tcaggtttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGCTCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTAc                                                                                          >  3:271105‑M1/22‑132 (MQ=255)
                                                                                                                                                                             aTGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGATTACTCTTCCCGTTGGCTGCGTGATACTGgtcgt                     >  1:475302/1‑200 (MQ=255)
                                                                                                                                                                               gttgtGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGCAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTAcgc                                                                              >  2:716890/1‑141 (MQ=255)
                                                                                                                                                                                 tttcagtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTGGAGGACGTTGAAAACGCGAAACATTCTGGTCGCCCGCCCAACCAGGTGTACCGCGACTTACGCGCGGGggcggc                                                                   <  4:863982‑M1/134‑1 (MQ=255)
                                                                                                                                                                                  gtgCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTCCCGCGAt                                                                                    >  3:517518/1‑132 (MQ=255)
                                                                                                                                                                                      gtaccgtacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCggggg                                                                       <  2:324721‑M1/130‑1 (MQ=255)
                                                                                                                                                                                          gCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACCCGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTg                                                          <  4:176865/150‑1 (MQ=255)
                                                                                                                                                                                            tacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGCAACATTCTGGCCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCgg                                                                          <  3:555475‑M1/127‑1 (MQ=255)
                                                                                                                                                                                            tacctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCt                                                                 <  2:459522‑M1/136‑1 (MQ=255)
                                                                                                                                                                                             ggacggaTCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGa                                                       >  4:303936/1‑150 (MQ=255)
                                                                                                                                                                                             acctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGa                                                       <  4:628038‑M1/146‑1 (MQ=255)
                                                                                                                                                                                              gacggaTCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGATTACTCTTCCCGTTGGCTGCGTGATACTGGTCGTCTGGCGAGCATTCGTac    <  1:691910/200‑1 (MQ=255)
                                                                                                                                                                                              cctGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGATTACTCTTCCCGTTGGCTGCGTGATACTGGTCGTCTGGCGAGCATTCGTac    >  1:114000‑M1/4‑200 (MQ=255)
                                                                                                                                                                                                 |                                                                                                                                                                                                      
CAACCGCACCTATTATTTGAGCCGCTCGCAACCACCGGTTTTTGCGCTGATGGTGGAGTTGTTTGAAGAAGATGGTGTACGCGGTGCGCGCCGCTATCTCGACCACCTTAAAATGGAATATGCCTTCTGGATGGACGGTGCAGAATCGTTAATCCCTAATCAGGCCTATCGCCATGTTGTGCGGATGCCGGACGGATCGCTGCTCAACCGTTACTGGGACGATCGCGACACGCCGCGTGACGAATCCTGGCTTGAGGACGTTGAAACCGCGAAACATTCTGGTCGCCCGCCCAACGAGGTGTACCGCGATTTACGCGCGGGGGCGGCCTCCGGTTGGGATTACTCTTCCCGTTGGCTGCGTGATACTGGTCGTCTGGCGAGCATTCGTACCA  >  NC_000913/3670230‑3670621

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.