New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3775724287 (2.430)6 (0.050) 5/280 11.4 2.3% coding (153/588 nt) mtlR mannitol operon repressor
?NC_000913 = 3775808 238 (2.160)coding (237/588 nt) mtlR mannitol operon repressor
Rejected: Position hash score below cutoff.

Only 100 of 289 total aligned reads displayed.

GCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTAAAACTCATTTACGGGTTGGGCGTCATTAACCGCCAGGAATACGAAGATGCGGAACTGCTGATGGCATT  >  NC_000913/3775526‑3775918
                                                                                                                                                                                                       |                                                                                                                                                                                                  
     gTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTg                                                                                                                                                                                              >  1:355780/1‑200 (MQ=255)
         tATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCg                                                                                                                                                                                          <  1:657698/200‑1 (MQ=255)
          aTCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGa                                                                                                                                                                                         >  1:76137/1‑200 (MQ=255)
                     tAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAAtc                                                                                                                                                                              <  1:242443/200‑1 (MQ=255)
                     tAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAAtc                                                                                                                                                                              <  1:831425/200‑1 (MQ=255)
                           cTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTgg                                                                                                                                                                        >  1:600267/1‑200 (MQ=255)
                             tataAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTg                                                                                                                                                                      <  1:283975/200‑1 (MQ=255)
                                     aatgcaatAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGt                                                                                                                                                              <  1:808786/200‑1 (MQ=255)
                                      atgcaatAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTa                                                                                                                                                             >  1:407570/1‑200 (MQ=255)
                                                   ggACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCt                                                                                                                                                                                                  >  4:446178/1‑150 (MQ=255)
                                                         ggCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGAc                                                                                                                                                                                            <  4:228475/150‑1 (MQ=255)
                                                         ggCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTAcg                                                                                                                                          <  1:869627/200‑1 (MQ=255)
                                                             cAGGACACCTGGCGCCAGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTc                                                                                                                                                                                                 <  2:512833/141‑1 (MQ=255)
                                                               ggACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCt                                                                                                                                                                                               >  2:590912/1‑141 (MQ=255)
                                                               ggACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCt                                                                                                                                                                                               >  2:580325/1‑141 (MQ=255)
                                                                    cccTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAACCCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGAcc                                                                                                                                                                                           >  2:754743/1‑141 (MQ=255)
                                                                    cccTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGc                                                                                                                                                                                                   >  3:82758/1‑132 (MQ=255)
                                                                    cccTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCg                                                                                                                                                                                          >  2:808037/1‑141 (MQ=255)
                                                                    cccTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTaa                                                                                                                                                                                 >  4:438539/1‑150 (MQ=255)
                                                                    cccTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTAt                                                                                                                               <  1:221117/200‑1 (MQ=255)
                                                                           cccGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAg                                                                                                                        <  1:499957/200‑1 (MQ=255)
                                                                              gAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGt                                                                                                                                                                       >  4:318653/1‑150 (MQ=255)
                                                                              gAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAAc                                                                                                                     <  1:273420/200‑1 (MQ=255)
                                                                               aaTAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAAcc                                                                                                                    <  1:103975/200‑1 (MQ=255)
                                                                                   aCAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAAtcttc                                                                                                                                                                           <  2:699298/141‑1 (MQ=255)
                                                                                      gATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTaa                                                                                                                                                                                 >  3:151939/1‑132 (MQ=255)
                                                                                            cAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTc                                                                                                                                                                  <  2:17869/141‑1 (MQ=255)
                                                                                                 atGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTg                                                                                                                                                                      <  3:447225/132‑1 (MQ=255)
                                                                                                      ggCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCg                                                                                                                                                        >  2:406317/1‑141 (MQ=255)
                                                                                                        caacaaTGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAgg                                                                                                                                                               <  3:505337/132‑1 (MQ=255)
                                                                                                        caacaaTGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTg                                                                                           >  1:441239/1‑200 (MQ=255)
                                                                                                          acaaTGGACCAAACCCAGGCTTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCGGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTAc                                                                                                                                           <  4:302668/150‑1 (MQ=255)
                                                                                                          acaaTGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTAc                                                                                                                                           >  4:569884/1‑150 (MQ=255)
                                                                                                           caaTGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTAcg                                                                                                                                          >  4:588565/1‑150 (MQ=255)
                                                                                                           caaTGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTAcg                                                                                                                                          >  4:770118/1‑150 (MQ=255)
                                                                                                           caaTGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGc                                                                                        >  1:621137/1‑200 (MQ=255)
                                                                                                           caaTGGAACAAACCCAGGCCTTTGAAAAACGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCAAGGCGGTACATCTTCTGGTGCTTCAGGTATTCCCCAAAGACGATTAcg                                                                                                                                          >  4:900399/1‑150 (MQ=255)
                                                                                                            caTGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGa                                                                                                                                                  <  2:350510/140‑1 (MQ=255)
                                                                                                                gAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTg                                                                                                                                     >  4:373266/1‑150 (MQ=255)
                                                                                                                gAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTg                                                                                                                                     >  4:171808/1‑150 (MQ=255)
                                                                                                                gAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCt                                                                                   >  1:135153/1‑200 (MQ=255)
                                                                                                                gAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCt                                                                                   >  1:783545/1‑200 (MQ=255)
                                                                                                                gAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCt                                                                                   >  1:325814/1‑200 (MQ=255)
                                                                                                                   cAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTc                                                                                <  1:697532/200‑1 (MQ=255)
                                                                                                                     aaCCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTAcgc                                                                                                                                         >  2:85423/1‑141 (MQ=255)
                                                                                                                      aCCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGAc                                                                                                                                                 >  3:349253/1‑132 (MQ=255)
                                                                                                                      aCCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCCGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGAc                                                                                                                                                 >  3:90206/1‑132 (MQ=255)
                                                                                                                           ggCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGt                                                                                                                          <  4:757939/150‑1 (MQ=255)
                                                                                                                               tttGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTAcgcg                                                                                                                                        >  3:587452/1‑132 (MQ=255)
                                                                                                                               tttGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTAt                                                                                                                               >  2:673652/1‑141 (MQ=255)
                                                                                                                               tttGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTAt                                                                                                                               <  2:652443/141‑1 (MQ=255)
                                                                                                                               tttGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGc                                                                                                                             >  1:302634/1‑143 (MQ=255)
                                                                                                                               tttGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTaaa                                                                    >  1:432426/1‑200 (MQ=255)
                                                                                                                                ttGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAAc                                                                                                                     <  4:540633/150‑1 (MQ=255)
                                                                                                                                ttGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAAc                                                                                                                     <  4:260910/150‑1 (MQ=255)
                                                                                                                                 tGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTAAAAc                                                                  <  1:168292/200‑1 (MQ=255)
                                                                                                                                 tGAAAACCGTGGGCTTGAGCGTCTGAATTGTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGc                                                                                                                             <  2:83770/141‑1 (MQ=255)
                                                                                                                                   aaaaCCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTg                                                                                                                           >  2:213319/1‑141 (MQ=255)
                                                                                                                                        cGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTc                                                                                                             <  4:829877/150‑1 (MQ=255)
                                                                                                                                         gtgtGCTTGGGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAAc                                                                                                                     <  2:784853/141‑1 (MQ=255)
                                                                                                                                         gtgtGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAAc                                                                                                                     <  2:443174/141‑1 (MQ=255)
                                                                                                                                             gCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGt                                                                                                                          <  3:741720/132‑1 (MQ=255)
                                                                                                                                             gCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGt                                                                                                                          <  3:606705/132‑1 (MQ=255)
                                                                                                                                             gCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACgg                                                                                                        <  4:160196/150‑1 (MQ=255)
                                                                                                                                                 gggCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTc                                                                                                             <  2:681382/139‑1 (MQ=255)
                                                                                                                                                   gCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTGTAAAACTCATTTACGGGTTGGGCg                                                <  1:842501/200‑1 (MQ=255)
                                                                                                                                                    cGTCTGAATGCTGGCAAAG‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCg                                                                                                                   <  3:193524/132‑1 (MQ=255)
                                                                                                                                                    cGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCg                                                                                                                   >  3:652722/1‑132 (MQ=255)
                                                                                                                                                     gTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTc                                                                                                >  4:88830/1‑150 (MQ=255)
                                                                                                                                                     gTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTc                                                                                                >  4:852842/1‑150 (MQ=255)
                                                                                                                                                      tCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGtt                                                                                                                 >  3:532607/1‑132 (MQ=255)
                                                                                                                                                      tCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGtt                                                                                                                 >  3:876567/1‑132 (MQ=255)
                                                                                                                                                      tCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACgg                                                                                                        >  2:333/1‑141 (MQ=255)
                                                                                                                                                      tCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTcc                                                                                               >  4:419475/1‑150 (MQ=255)
                                                                                                                                                      tCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTAAAACCCATTTACGGGTTGGGCGTCa                                             >  1:478616/1‑200 (MQ=255)
                                                                                                                                                          aaTGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTc                                                                                                             <  3:310316/132‑1 (MQ=255)
                                                                                                                                                              cTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTc                                                                                                >  2:312510/1‑141 (MQ=255)
                                                                                                                                                              cTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCCAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTAAAACTCATTTACGGGTTGTGCGTCATTAACCGc                                     >  1:98387/1‑200 (MQ=255)
                                                                                                                                                               tGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTcc                                                                                               >  2:91132/1‑141 (MQ=255)
                                                                                                                                                                ggCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCg                                                                                              >  2:549791/1‑141 (MQ=255)
                                                                                                                                                                ggCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTAAAACTCATTTACGGGTTGGGCGTCATTAACCGCCa                                   >  1:99849/1‑200 (MQ=255)
                                                                                                                                                                          gTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCtgtg                                                                            >  4:202498/1‑150 (MQ=255)
                                                                                                                                                                                 gCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCtg                                                                              >  2:133466/1‑141 (MQ=255)
                                                                                                                                                                                 gCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCGTCCGGTATTCCGCAAAGACGATTCCGCGGTAAAGCATGCTGTAGAACCGTTACGCGACGGAGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTaa                                                                     >  4:604090/1‑150 (MQ=255)
                                                                                                                                                                                  cTTTCTGAGCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTAGGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGa                                                                                      <  3:714280/132‑1 (MQ=255)
                                                                                                                                                                                   tttCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGAt                                                                                     >  3:550577/1‑132 (MQ=255)
                                                                                                                                                                                   tttCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCtgtg                                                                            <  2:69497/141‑1 (MQ=255)
                                                                                                                                                                                   tttCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCtgtg                                                                            <  2:385561/141‑1 (MQ=255)
                                                                                                                                                                                   tttCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTaaaa                                                                   >  4:453595/1‑150 (MQ=255)
                                                                                                                                                                                   tttCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTaaaa                                                                   >  4:791728/1‑150 (MQ=255)
                                                                                                                                                                                    ttCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTAAAAc                                                                  <  4:518098/150‑1 (MQ=255)
                                                                                                                                                                                     tCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTAAAACTCATTTACGGGTTGGGCGTCATTAACCGCCAGGAATACGAAGATGCGGAAc               <  1:651902/200‑1 (MQ=255)
                                                                                                                                                                                        gATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTAcgc                                                                                                                                         >  2:634773/1‑75 (MQ=255)
                                                                                                                                                                                        gATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTAcgc                                                                                                                                         <  3:634757/75‑1 (MQ=255)
                                                                                                                                                                                        gATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTc                                                                                <  3:76947/132‑1 (MQ=255)
                                                                                                                                                                                        gATCACCGCCGTCGAGCCCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAACGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTCGGCGATCTTTc                                                                                >  3:242310/1‑132 (MQ=255)
                                                                                                                                                                                             ccgccgTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGc                                                                           >  3:387499/1‑132 (MQ=255)
                                                                                                                                                                                               gccgTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTAAAACTCATTTACGGGTTGGGCGTCATTAACCGCCAGGAATACGAAGATGCGGAACTGCTGATGGc     <  1:50706/200‑1 (MQ=255)
                                                                                                                                                                                                  gTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTAAAACTCAtt                                                             >  2:287695/1‑141 (MQ=255)
                                                                                                                                                                                                  gTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGCTTAAAACTCATTTACGGGTTg                                                    >  4:628928/1‑150 (MQ=255)
                                                                                                                                                                                                       |                                                                                                                                                                                                  
GCGAGGTTGTATCCGAGGCGGTAACCGCTTATAAAGCAATGCAATAATGGTGGACCAGGCGCAGGACACCCTGCGCCCGAATAACAGATTGTCAGATATGCAGGCAACAATGGAACAAACCCAGGCCTTTGAAAACCGTGTGCTTGAGCGTCTGAATGCTGGCAAAA‑CCGTGCGAAGCTTTCTGATCACCGCCGTCGAGCTCCTGACCGAGGCGGTAAATCTTCTGGTGCTTCAGGTATTCCGCAAAGACGATTACGCGGTGAAGTATGCTGTAGAACCGTTACTCGACGGCGATGGTCCGCTGGGCGATCTTTCTGTGCGTTTAAAACTCATTTACGGGTTGGGCGTCATTAACCGCCAGGAATACGAAGATGCGGAACTGCTGATGGCATT  >  NC_000913/3775526‑3775918

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.