New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2319247130 (1.100)3 (0.030) 3/284 13.0 2.4% coding (630/2850 nt) rcsC hybrid sensory kinase in two‑component regulatory system with RcsB and YojN
?NC_000913 = 2319264 125 (1.120)coding (613/2850 nt) rcsC hybrid sensory kinase in two‑component regulatory system with RcsB and YojN
Rejected: Position hash score below cutoff.

Only 100 of 134 total aligned reads displayed.

GATCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGAAATTGGCCATGCAGAGGTTATCGCTGCCGATTAAAAATACCCGGTTTAGATCGTAAGC  >  NC_000913/2319075‑2319462
                                                                                                                                                                                              |                                                                                                                                                                                                      
gATCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAggg                                                                                                                                                                                              <  1:317411/200‑1 (MQ=255)
     cccTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCgg                                                                                                                                                                                         >  1:275388/1‑200 (MQ=255)
     cccTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCgg                                                                                                                                                                                         >  1:776842/1‑200 (MQ=255)
         tAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCt                                                                                                                                                                                     >  1:742409/1‑200 (MQ=255)
             tttACTTTCTGGTCCGGTAAGCGAAATCAGGTTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGc                                                                                                                                                                                 <  1:205109/200‑1 (MQ=255)
                                          gggTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGa                                                                                                                                                                                                      >  4:508499/1‑150 (MQ=255)
                                          gggTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTAc                                                                                                                                                               >  1:445541/1‑189 (MQ=255)
                                          gggTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTatca                                                                                                                                                    >  1:832809/1‑200 (MQ=255)
                                               tGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTtg                                                                                                                                               <  1:726134/200‑1 (MQ=255)
                                                 aCCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAgt                                                                                                                                                                                               <  4:595485/150‑2 (MQ=255)
                                                  ccATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTgtgg                                                                                                                                            <  1:373686/200‑1 (MQ=255)
                                                       ttCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCAt                                                                                                                                       <  1:143675/200‑1 (MQ=255)
                                                         catcaAGAATGGTAACCCCCATCGGCAACGTACCCGTAAAGAAAAAGTTCTCAACCCGG‑TTGTCTGGCTGGACACCAAAAGGGGCTGGCAACCGGTTCGCAGGATAAACTGGCGTCAACGCGTAAAAAAACCGGACGCAAg                                                                                                                                                                                                >  2:826523/1‑141 (MQ=255)
                                                         catcaAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAATTTCTCCATCCGGATTGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGAc                                                                                                                                                                                       <  4:462546/150‑1 (MQ=255)
                                                         catcaAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGAc                                                                                                                                                                                       <  4:244138/150‑1 (MQ=255)
                                                         catcaAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCAttt                                                                                                                                     >  1:368645/1‑200 (MQ=255)
                                                          atcaAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATAccc                                                                                                                                                                                                        <  3:503576/132‑1 (MQ=255)
                                                           tcaAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAggg                                                                                                                                                                                              <  2:239255/141‑1 (MQ=255)
                                                           tcaAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAggg                                                                                                                                                                                              <  2:479461/141‑1 (MQ=255)
                                                               gAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAgtttatc                                                                                                                                                                                          <  2:809876/141‑7 (MQ=255)
                                                                 aTGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCa                                                                                                                                                                                                 >  3:284892/1‑132 (MQ=255)
                                                                  tGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGAtattta                                                                                                                            >  1:812438/1‑200 (MQ=255)
                                                                        cccccATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGc                                                                                                                                                                                 >  2:820917/1‑141 (MQ=255)
                                                                        cccccATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                                                      <  1:399492/200‑1 (MQ=255)
                                                                        cccccATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                                                      <  1:237712/200‑1 (MQ=255)
                                                                        cccccATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                                                      <  1:147647/200‑1 (MQ=255)
                                                                        cccccATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAAAGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                                                      <  1:265057/200‑1 (MQ=255)
                                                                          cccATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                                                      <  4:70287/150‑1 (MQ=255)
                                                                          cccATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                                                      <  4:437508/150‑1 (MQ=255)
                                                                          cccATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCg                                                                                                                    <  1:97882/200‑1 (MQ=255)
                                                                            cATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGAcc                                                                                                                                                                                      <  3:306958/132‑1 (MQ=255)
                                                                            cATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGAcc                                                                                                                                                                                      <  3:149104/132‑1 (MQ=255)
                                                                             aTCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATc                                                                                                                                                                            <  2:176635/141‑1 (MQ=255)
                                                                                 gCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGc                                                                                                             >  1:865992/1‑200 (MQ=255)
                                                                                   aaCGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                                                      <  2:411103/141‑1 (MQ=255)
                                                                                   aaCGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                                                      <  2:213684/141‑1 (MQ=255)
                                                                                   aaCGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                                                      <  2:149302/141‑1 (MQ=255)
                                                                                    aCGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTaga                                                                                                                                                                     >  2:237625/1‑141 (MQ=255)
                                                                                     cGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGAt                                                                                                                                                                             >  3:700106/1‑132 (MQ=255)
                                                                                      gTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAgg                                                                                                                                                                   <  2:652606/141‑1 (MQ=255)
                                                                                      gTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCg                                                                                                                                                          >  4:189394/1‑150 (MQ=255)
                                                                                        aCCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACATTCGCTGATCCa                                                                                                                                                                          >  3:854248/1‑132 (MQ=255)
                                                                                            ggTAAGAAAAAGTTCGCCAGCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAAGACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTag                                                                                                                                                                      <  3:3722/132‑1 (MQ=255)
                                                                                               aaGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCt                                                                                                                                                 >  4:629131/1‑150 (MQ=255)
                                                                                                aGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAggg                                                                                                                                                                                              <  4:674088/104‑1 (MQ=255)
                                                                                                aGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAggg                                                                                                                                                                                              >  1:674147/1‑104 (MQ=255)
                                                                                                 gAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGtt                                                                                                                                                                 <  3:196841/132‑1 (MQ=255)
                                                                                                 gAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCGGATCCAGTa                                                                                                                                                                       >  2:255099/1‑126 (MQ=255)
                                                                                                 gAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACAACCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCt                                                                                                                                                        >  2:490161/1‑141 (MQ=255)
                                                                                                 aaaaaaGTTCTCCATCCGGATGGGCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCCACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGc                                                                                                                                                                                 <  1:511063/115‑1 (MQ=255)
                                                                                                    aaaGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTgtgg                                                                                                                                            <  4:630737/150‑1 (MQ=255)
                                                                                                        ttCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCt                                                                                                                                                 <  2:889705/141‑1 (MQ=255)
                                                                                                        ttCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCt                                                                                                                                                 <  2:348011/141‑1 (MQ=255)
                                                                                                         tctcCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCCGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGc                                                                                                                                                         >  3:377992/1‑132 (MQ=255)
                                                                                                         tctcCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATGCAGTCGAGGTTACTGCCGCTAGCATCTTGTGGTGCAt                                                                                                                                       >  4:480691/1‑150 (MQ=255)
                                                                                                         tctcCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                                                      <  1:480738/167‑1 (MQ=255)
                                                                                                          ctcCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTtg                                                                                                                                               <  2:654139/141‑1 (MQ=255)
                                                                                                          ctcCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTtg                                                                                                                                               <  2:455293/141‑1 (MQ=255)
                                                                                                            ccATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGAGTAAAAATACCCGACGCAAGGGCGCCGCCCTTCGCTGATCCCGTAGAGGGTAATGCCCCTATCATCTTGTGGTGCATTTc                                                                                                                                    >  4:851234/1‑150 (MQ=255)
                                                                                                             cATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTgtgg                                                                                                                                            <  2:906698/141‑1 (MQ=255)
                                                                                                              aTCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGa                                                                                                                                  >  4:514727/1‑150 (MQ=255)
                                                                                                                 cGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAGCTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGGCCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCt                                                                                                                                                 <  3:323054/132‑1 (MQ=255)
                                                                                                                 cGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGTCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCa                                                                                                                                        >  2:505757/1‑141 (MQ=255)
                                                                                                                  ggATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGtt                                                                                                                                                                 <  4:164727/115‑1 (MQ=255)
                                                                                                                  ggATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGtt                                                                                                                                                                 >  1:164729/1‑115 (MQ=255)
                                                                                                                        tCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTgtggtg                                                                                                                                          <  3:46435/132‑1 (MQ=255)
                                                                                                                          t‑GCTCGACACCCAAAGGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                                                      <  4:285721/150‑1 (MQ=255)
                                                                                                                               cGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTc                                                                                                                                    <  3:557529/132‑1 (MQ=255)
                                                                                                                                gACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGAtatttatt                                                                                                                          <  2:110392/141‑1 (MQ=255)
                                                                                                                                 acacCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGa                                                                                                                                  >  3:661066/1‑132 (MQ=255)
                                                                                                                                    cccAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                                                      <  2:552186/141‑1 (MQ=255)
                                                                                                                                    cccAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGc                                                                                                             <  4:368622/150‑1 (MQ=255)
                                                                                                                                         aaGCGCCTGCAAACGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGAtatttatt                                                                                                                          <  3:861217/132‑1 (MQ=255)
                                                                                                                                             gcaagCAACCGGGTAGCCAGATAAACAGGAGGAAACGCGTAAAAATACCCGACGCGAGGGAGCGGACCTTCGCTGATAGAGAAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                                                      <  3:209450/128‑1 (MQ=255)
                                                                                                                                             gcCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                                                      <  3:772220/132‑1 (MQ=255)
                                                                                                                                              ccTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                                                      >  1:800228/1‑131 (MQ=255)
                                                                                                                                              ccTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATg                                                                                                                      <  4:800162/131‑1 (MQ=255)
                                                                                                                                                 gCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGAAATTGGCCATGCag                                              <  1:435097/200‑1 (MQ=255)
                                                                                                                                                      cGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGc                                                                                                             <  3:237615/132‑1 (MQ=255)
                                                                                                                                                       ggTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCa                                                                                                            <  3:497100/132‑1 (MQ=255)
                                                                                                                                                                gATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCa                                                                                                   >  3:691734/1‑132 (MQ=255)
                                                                                                                                                                gATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCa                                                                                                   >  3:463331/1‑132 (MQ=255)
                                                                                                                                                                gATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTAt                                                                                          >  2:41247/1‑141 (MQ=255)
                                                                                                                                                                gATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTAt                                                                                          >  2:547575/1‑141 (MQ=255)
                                                                                                                                                                   aaaCTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAAcg                                                                                                >  3:386032/1‑132 (MQ=255)
                                                                                                                                                                   aaaCTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGAAATTGGCCATGCAGAGGTTATCGCTGCCGAtt                            >  1:50637/1‑200 (MQ=255)
                                                                                                                                                                    aaCTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTgg                                                                             >  4:768194/1‑150 (MQ=255)
                                                                                                                                                                      cTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCa                                                                           >  4:588844/1‑150 (MQ=255)
                                                                                                                                                                       tGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCat                                                                          <  4:249434/150‑1 (MQ=255)
                                                                                                                                                                                cgcgTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTc                                                                                   <  3:905928/132‑1 (MQ=255)
                                                                                                                                                                                  cgTAAAAATACCCGACGCCAGGGCGCGGACCTTAGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGAAATTGGcc                                                    >  1:215553/1‑161 (MQ=255)
                                                                                                                                                                                      aaaaTACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTgg                                                                             >  3:42154/1‑132 (MQ=255)
                                                                                                                                                                                      aaaaTACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGaa                                                           >  4:226597/1‑150 (MQ=255)
                                                                                                                                                                                      aaaaTACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGAAATTGGCCATGCAGAGGTTATCGCTGCCGATTAAAAATACCCGGTTTAGAt         <  1:105163/200‑1 (MQ=255)
                                                                                                                                                                                      aaaaTACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGAAATTGGCCATGCAGAGGTTATCGCTGCCGATTAAAAATACCCGGTTTAGAt         <  1:508549/200‑1 (MQ=255)
                                                                                                                                                                                       aaaTACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGAAATTGGCCATGCAGAGGTTATCGCTGCCGATTAAAAATACCCGGTTTAGATc        <  1:191817/200‑1 (MQ=255)
                                                                                                                                                                                       aaaTACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGAAATTGGCCATGCAGAGGTTATCGCTGCCGATTAAAAATACCCGGTTTAGATc        <  1:189397/200‑1 (MQ=255)
                                                                                                                                                                                       aaaTACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGAAATTGGCCATGCAGAGGTTATCGCTGCCGATTAAAAATACCCGGTTTAGATc        <  1:762509/200‑1 (MQ=255)
                                                                                                                                                                                        aaTACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGAAAt                                                         <  4:514085/150‑1 (MQ=255)
                                                                                                                                                                                             ccGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGAAATTGGCCATGCAGAGGTTATCGCTGCCGATTAAAAATACCCGGTTTAGATCGTAAGc  <  1:629189/200‑1 (MQ=255)
                                                                                                                                                                                              |                                                                                                                                                                                                      
GATCGCCCTTAATTTTACTTTCTGGTCCGGTAAGCGAAATCAGGGTATGACCATTTTCATCAAGAATGGTAACCCCCATCGGCAACGTACCCGGTAAGAAAAAGTTCTCCATCCGGATGGTCT‑GCTCGACACCCAAAAGCGCCTGCAACCGGTTCGCCAGATAAACTGGCGTCAACGCGTAAAAATACCCGACGCCAGGGCGCGGACCTTCGCTGATCCAGTAGAGGTTACTGCCGCTATCATCTTGTGGTGCATTTCGATATTTATTGATGCGTTCATGCAAAGCTTTCAACGCGGTATCGCGTTCCACTGGCATATCACGCAGACCGAAATTGGCCATGCAGAGGTTATCGCTGCCGATTAAAAATACCCGGTTTAGATCGTAAGC  >  NC_000913/2319075‑2319462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.