BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2593882	134 (1.140)	3 (0.030)	3/286	13.1	2.3%	coding (1978/2016 nt)	tmcA	elongator methionine tRNA (ac4C34) acetyltransferase
*	?	NC_000913	= 2593918	126 (1.120)	3 (0.030)	3/286	13.1	2.3%	coding (1942/2016 nt)	tmcA	elongator methionine tRNA (ac4C34) acetyltransferase
Rejected: Position hash score below cutoff.

Only 100 of 131 total aligned reads displayed.

TATCCGGGCTTTGAACAACAAAATGGTCATGTTTCATGGCGAACTCCTTAACTGATGTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGA  >  NC_000913/2593734‑2594096

tATCCGGGCTTTGAACAACAAAATGGTCATGTTTCATGGCGAACTCCTTAACTGATGTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTc                                                                                                                                                                     >  1:604006/1‑200 (MQ=255)

      ggCTTTGAACAACAAAATGGTCATGTTTCATGGCGAACTCCTTAACTGATGTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTg                                                                                                                                                               >  1:886365/1‑200 (MQ=255)

                 acaaAATGGTCATGTTTCATGGCGAACTCCTTAACTGATGTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCta                                                                                                                                                               >  1:492656/1‑188 (MQ=255)

                                           cTCCTTAACTGATGTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCgg                                                                                                                                                                            >  4:583713/1‑150 (MQ=255)

                                           cTCCTTAACTGATGTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCgg                                                                                                                                                                            >  4:515466/1‑150 (MQ=255)

                                           cTCCTTAACTGATGTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCgg                                                                                                                                                                            >  4:262729/1‑150 (MQ=255)

                                           cTCCTTAACTGATGTCAGTAATTTTACGCCGCTGACTCACACTGACCATGAGATAAACTTGAAGGAGTCCGTGAAATAATTGCCCTTGCGTTATTCGATCGCGCAGACGCTCAGTGCGCACATCACTAAGTGCGAACAGCGCCTGCGCgg                                                                                                                                                                            >  4:825984/1‑150 (MQ=255)

                                            tCCTTAACTGATGTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAgtg                                                                                                                         <  1:340332/200‑1 (MQ=255)

                                             ccTTAACTGATGTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGcc                                                                                                                                                                                   >  2:18491/1‑141 (MQ=255)

                                             ccTTAACTGATGTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGcc                                                                                                                                                                          >  4:684877/1‑150 (MQ=255)

                                             ccTTAACTGATGTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGcc                                                                                                                                                                          >  4:18936/1‑150 (MQ=255)

                                             ccTTAACTGATGTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAgtgt                                                                                                                        >  1:719349/1‑200 (MQ=255)

                                                  aCTGATGTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTAc                                                                                                                   <  1:629803/200‑1 (MQ=255)

                                                       tGTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              <  1:865407/200‑1 (MQ=255)

                                                        gTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCta                                                                                                                                                               <  4:492608/150‑2 (MQ=255)

                                                         tCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTg                                                                                                            <  1:895103/200‑1 (MQ=255)

                                                          cATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCtt                                                                                                                                                                      >  2:165509/1‑141 (MQ=255)

                                                                 tttACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCctc                                                                                                                                                                        <  3:691361/132‑1 (MQ=255)

                                                                     cgccgcTGACTCACAATTACCATGAGATAAAAGTGAAGGAGTCAGTGAAATAATTGCCAGTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTcc                                                                                                                                                                    <  3:214582/132‑1 (MQ=255)

                                                                       ccgcTGACTCACAATGACCATGAGATAAAGTTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACAt                                                                                                                                                <  4:649345/150‑1 (MQ=255)

                                                                       ccgcTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACAt                                                                                                                                                <  4:12280/150‑1 (MQ=255)

                                                                            gACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGcc                                                                                                                                                                                   >  2:703925/1‑110 (MQ=255)

                                                                            gACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGcc                                                                                                                                                                                   <  3:703901/110‑1 (MQ=255)

                                                                            gACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTc                                                                                         <  1:74123/200‑1 (MQ=255)

                                                                                  caATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCt                                                                                                                                              <  2:912457/141‑1 (MQ=255)

                                                                                  caATGACCATGAGATAAAATTGAAGGAGTCAGCGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCt                                                                                                                                              <  2:249213/141‑1 (MQ=255)

                                                                                    aTGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACg                                                                                 >  1:812705/1‑200 (MQ=255)

                                                                                      gACCATGAGATACAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGCACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTaa                                                                                                                                                   >  3:190713/1‑132 (MQ=255)

                                                                                        ccATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAggt                                                                                                                               >  4:15807/1‑148 (MQ=255)

                                                                                        ccATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCa                                                                             >  1:82059/1‑200 (MQ=255)

                                                                                         cATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACAt                                                                                                                                                <  3:549765/132‑1 (MQ=255)

                                                                                             agaTAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGaa                                                                                                                                   >  2:105432/1‑141 (MQ=255)

                                                                                             agaTAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAg                                                                        >  1:230627/1‑200 (MQ=255)

                                                                                             agaTAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAg                                                                        >  1:101843/1‑200 (MQ=255)

                                                                                              gaTAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAgtg                                                                                                                         <  4:184375/150‑1 (MQ=255)

                                                                                               aTAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCg                                                                                                                                          <  3:22201/132‑1 (MQ=255)

                                                                                                 aaaaTTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGcc                                                                    <  1:723105/200‑1 (MQ=255)

                                                                                                  aaaTTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGcc                                                                                                                                       <  3:84848/132‑1 (MQ=255)

                                                                                                    atggAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTAc                                                                                                                   <  4:80229/147‑1 (MQ=255)

                                                                                                    aTTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTAc                                                                                                                   >  4:885815/1‑150 (MQ=255)

                                                                                                       gAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAgtg                                                                                                                         <  2:454393/141‑1 (MQ=255)

                                                                                                       gAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAgtg                                                                                                                         <  2:584518/141‑1 (MQ=255)

                                                                                                         cggtgTCAGTTAAATAATTGCAATGGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCAGTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              <  4:615388/146‑1 (MQ=255)

                                                                                                         aGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              <  4:828218/150‑1 (MQ=255)

                                                                                                         aGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              <  4:735644/150‑1 (MQ=255)

                                                                                                         aGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              <  4:56931/150‑1 (MQ=255)

                                                                                                         aGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              <  4:886284/150‑1 (MQ=255)

                                                                                                          ggAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGcc                                                           <  1:83345/200‑1 (MQ=255)

                                                                                                           gAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTg                                                                                                            <  4:293815/150‑1 (MQ=255)

                                                                                                              tCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAg                                                                                                                           <  3:860899/132‑1 (MQ=255)

                                                                                                               cAGTGAAATAATTGCCATTGCGTTATGCGATCGCTCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTc                                                      <  1:805751/200‑1 (MQ=255)

                                                                                                                aGTCAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCCTTAAGTGCGAACAGCGCCTGCGCGACCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAgtg                                                                                                                         <  3:474529/132‑1 (MQ=255)

                                                                                                                  ttaaaTAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              <  2:229193/139‑1 (MQ=255)

                                                                                                                  tGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              <  2:271046/141‑1 (MQ=255)

                                                                                                                  tGAAATAATGGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCATCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              <  2:906308/141‑1 (MQ=255)

                                                                                                                      ataatTGCCATTACGGTATGCGAACGCGCCGACGCTCACTACGAACATCATTAAGTGCGAACAGCTCGTGCGCGGCCTCTTGCCGCTGACGGACCAGTAACATCATGCCGCCTGAAAGTTCAAGTGTGGGACATAACTGTCCATCACCgg                                                                                                 >  4:397484/1‑150 (MQ=255)

                                                                                                                        aatTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCAGTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACAt                                                                                                                 <  3:595627/132‑1 (MQ=255)

                                                                                                                           tGCCATTGCGTTATGCGATCTCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              <  3:543625/132‑1 (MQ=255)

                                                                                                                           tGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              <  3:263340/132‑1 (MQ=255)

                                                                                                                           tGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              <  3:165502/132‑1 (MQ=255)

                                                                                                                           tGCCATTGCGTGAGGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              <  3:633514/132‑1 (MQ=255)

                                                                                                                            gCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGtttt                                                                                           >  4:257099/1‑150 (MQ=255)

                                                                                                                            gCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAAc                                         <  1:616385/200‑1 (MQ=255)

                                                                                                                             ccATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGcc                                                                                                                                                                          >  3:48087/1‑70 (MQ=255)

                                                                                                                             ccATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGcc                                                                                                                                                                          <  2:48089/70‑1 (MQ=255)

                                                                                                                             ccATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACAt                                                                                                                                                <  4:885378/96‑1 (MQ=255)

                                                                                                                             ccATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              >  3:626843/1‑130 (MQ=255)

                                                                                                                             ccAGTGCGTTATGCGATCGCGAAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGAGGCCTCTACCGGCTGACGGACCAGTAACATCTTGCGGCCTGAAGGTTTAAGTGTGGTACATAACTg                                                                                                            <  3:56498/132‑1 (MQ=255)

                                                                                                                                  gCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGACAGTTTAAGTGTGGTACATAACTGCGCAt                                                                                                       >  3:405683/1‑132 (MQ=255)

                                                                                                                                  gCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCAt                                                                                                       >  3:328957/1‑132 (MQ=255)

                                                                                                                                  gCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGt                                                                                              >  2:657204/1‑141 (MQ=255)

                                                                                                                                  gCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTa                                                                                     >  4:626344/1‑150 (MQ=255)

                                                                                                                                  gCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGc                                   >  1:571703/1‑200 (MQ=255)

                                                                                                                                    gTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCa                                                                                                     >  3:907107/1‑132 (MQ=255)

                                                                                                                                          cGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCa                           <  1:78830/200‑1 (MQ=255)

                                                                                                                                                cgcAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTc                                                                                         >  3:436844/1‑132 (MQ=255)

                                                                                                                                                   aGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAacga                  <  1:32432/200‑1 (MQ=255)

                                                                                                                                                      cGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGc                                                                          <  2:436856/141‑1 (MQ=255)

                                                                                                                                                      cGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGt               >  1:416771/1‑200 (MQ=255)

                                                                                                                                                            gTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGcc                                                           <  4:429437/150‑1 (MQ=255)

                                                                                                                                                                   catcatTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAgcg                                                                      >  3:189561/1‑132 (MQ=255)

                                                                                                                                                                   catcatTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATg                                                             >  2:562741/1‑141 (MQ=255)

                                                                                                                                                                   catcatTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGa  >  1:107164/1‑200 (MQ=255)

                                                                                                                                                                   catcatTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGCTCAc                                                    >  4:478101/1‑150 (MQ=255)

                                                                                                                                                                   catcatTAAGTGCGAACAGCACCTGCGCGGCCTCTTCCCGCTGACGCACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCAc                                                    >  4:530732/1‑150 (MQ=255)

                                                                                                                                                                     tcatTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGcc                                                                    >  3:26206/1‑132 (MQ=255)

                                                                                                                                                                     tcatTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGcc                                                           >  2:854727/1‑141 (MQ=255)

                                                                                                                                                                     tcatTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGcc                                                           >  2:641417/1‑141 (MQ=255)

                                                                                                                                                                     tcatTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGGTCACTg                                                  >  4:516495/1‑150 (MQ=255)

                                                                                                                                                                      catTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              >  4:494911/1‑89 (MQ=255)

                                                                                                                                                                      catTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAAc                                                                                                              <  1:494960/89‑1 (MQ=255)

                                                                                                                                                                      catTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAac                    >  1:110414/1‑179 (MQ=255)

                                                                                                                                                                            gTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATg                                                             >  3:69770/1‑132 (MQ=255)

                                                                                                                                                                            gTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTa                                           >  4:4067/1‑150 (MQ=255)

                                                                                                                                                                            gTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCCACCTAACGACGTTAATAg         >  1:875445/1‑184 (MQ=255)

                                                                                                                                                                                 aaCAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGtt                                               <  2:294666/141‑1 (MQ=255)

                                                                                                                                                                                     gcgcCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCAc                                                    >  3:153005/1‑132 (MQ=255)

                                                                                                                                                                                       gcCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAAc                                         <  2:18780/141‑1 (MQ=255)

                                                                                                                                                                                       gcCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAAc                                         <  2:659533/141‑1 (MQ=255)

                                                                                                                                                                                       gcCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAAc                                         <  2:578259/141‑1 (MQ=255)

TATCCGGGCTTTGAACAACAAAATGGTCATGTTTCATGGCGAACTCCTTAACTGATGTCATTAATTTTACGCCGCTGACTCACAATGACCATGAGATAAAATTGAAGGAGTCAGTGAAATAATTGCCATTGCGTTATGCGATCGCGCAGACGCTCAGTGCGAACATCATTAAGTGCGAACAGCGCCTGCGCGGCCTCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGA  >  NC_000913/2593734‑2594096

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.