Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2469122	2469829	708	65 [45]	[50] 57	[gtrB]–[gtrS]	[gtrB], [gtrS]

ATATTAACCCCACTAATAGTGTATTCATATTATA‑TTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACT  >  NC_000913/2469692‑2470029                                                                                                                                            |                                                                                                                                                                                                        atatTAACCCCACTAATAGTGTATTCATATTATA‑TTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAAt                                                                                                                                                                                                       >  2:598746/1‑141 (MQ=255)           cACTAATAGTGTATTCATATTATATTTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTa                                                                                                                                   >  1:654610/1‑200 (MQ=255)           cACTAATAGTGTATTCATATTATA‑TTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATg                                                                                                                                                                                             >  2:809236/1‑141 (MQ=255)             cTAATAGTGTATTCATATTATA‑TTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCa                                                                                                                                                                                           >  2:519286/1‑141 (MQ=255)                                                        cTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAg                                                                                                                                                                             >  4:578098/1‑113 (MQ=255)                                                            ttattaAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATaaaa                                                                                                                                             >  2:153297/1‑141 (MQ=255)                                                            ttattaAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGt                                                                                                                                    >  4:454856/1‑150 (MQ=255)                                                             tattaAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTa                                                                                                                                   >  4:871568/1‑150 (MQ=255)                                                                  aaTCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCAt                                                                                                                                       >  2:792051/1‑141 (MQ=255)                                                                    tCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATaaa                                                                                                                                              >  3:139176/1‑132 (MQ=255)                                                                    tCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATaaa                                                                                                                                              <  3:598730/132‑1 (MQ=255)                                                                    tCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCAtt                                                                          >  1:262167/1‑200 (MQ=255)                                                                       gTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTgg                                                                       >  1:479240/1‑200 (MQ=255)                                                                            atGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAgtg                                                                                                                    <  4:654551/150‑1 (MQ=255)                                                                             tGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAg                                                                                                                                                                             <  1:738536/92‑1 (MQ=255)                                                                             tGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAg                                                                                                                                                                             >  4:738474/1‑92 (MQ=255)                                                                                   gtgtGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCaa                                                                                                                                                                                          >  4:880402/1‑73 (MQ=255)                                                                                   gtgtGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCaa                                                                                                                                                                                          <  1:880481/73‑1 (MQ=255)                                                                                   gtgtGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTggg                                                                                                             >  4:12445/1‑150 (MQ=255)                                                                                   gtgtGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGt                                                                                              <  1:12444/165‑1 (MQ=255)                                                                                     gtgCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTtga                                                                                                                             >  3:132544/1‑132 (MQ=255)                                                                                              tgcGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGtt                                                                                                           >  2:461642/1‑141 (MQ=255)                                                                                                         ttGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATc                                                                                                                                                                        >  4:424904/1‑69 (MQ=255)                                                                                                         ttGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATc                                                                                                                                                                        <  1:424948/69‑1 (MQ=255)                                                                                                           gCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGAt                                                                                                       <  3:119949/132‑1 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTAc                                                                                                                                                                                                 >  1:36439/1‑37 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTAc                                                                                                                                                                                                 <  4:36440/37‑1 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAg                                                                                                                                                                             >  3:296443/1‑57 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAg                                                                                                                                                                             <  2:296457/57‑1 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATc                                                                                                                                                                        >  2:693543/1‑62 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATc                                                                                                                                                                        <  3:693519/62‑1 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAaacaac                                                                                                                                                       >  3:132751/1‑79 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAaacaac                                                                                                                                                       <  2:132759/79‑1 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATaaa                                                                                                                                              >  2:653169/1‑88 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATaaa                                                                                                                                              <  3:653153/88‑1 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATa                                                                                                                        >  4:68087/1‑110 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATa                                                                                                                        <  1:68085/110‑1 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAg                                                                                                                      <  1:396195/112‑1 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAg                                                                                                                      >  4:396169/1‑112 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTg                                                                                                  >  3:277210/1‑132 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTg                                                                                                  >  3:225096/1‑132 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGtaataa                                                                                         >  1:223876/1‑141 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGtaataa                                                                                         <  4:223871/141‑1 (MQ=255)                                                                                                                atCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGtaataa                                                                                         >  2:596594/1‑141 (MQ=255)                                                                                                                      ttCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGtaa                                                                                            >  3:796084/1‑132 (MQ=255)                                                                                                                                      gAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGt                                                                                                            <  4:39470/100‑1 (MQ=255)                                                                                                                                      gAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGt                                                                                                            >  1:39469/1‑100 (MQ=255)                                                                                                                                      gAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCa                                                                   >  2:318984/1‑141 (MQ=255)                                                                                                                                       aaTTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAg                                                         <  4:479193/150‑1 (MQ=255)                                                                                                                                           aaaTAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAAcccc                                                              >  2:375409/1‑141 (MQ=255)                                                                                                                                            aaTAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGa                                                                                                        <  4:38254/98‑1 (MQ=255)                                                                                                                                            aaTAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGa                                                                                                        >  1:38253/1‑98 (MQ=255)                                                                                                                                            aaTAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCa                                                             >  2:524639/1‑141 (MQ=255)                                                                                                                                            aaTAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCa                                                             >  2:876553/1‑141 (MQ=255)                                                                                                                                            aaTAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGtt                                                    >  4:358108/1‑150 (MQ=255)                                                                                                                                            aaTAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCAct  >  1:888689/1‑200 (MQ=255)                                                                                                                                            aaTAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCAct  >  1:25332/1‑200 (MQ=255)                                                                                                                                            |                                                                                                                                                                                                        ATATTAACCCCACTAATAGTGTATTCATATTATA‑TTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAAAGGTGTTGTTGAATTAAATAAGTACCATGCAACATACTTCGGTAGTTATCTTTATATGAAAAACAACGGGTATAAAATGCCATCGTATGTTGATGATAAGTGTGTTGGGTTAGATGCCTGGGGTAATAAATTCGACATATCATTTGGCGCAACCCCAACAGAAGTTGGAACGGAATGTTTCGAATCTCATAAAGATGAAACGTTTTCGAATGCACT  >  NC_000913/2469692‑2470029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.