Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	4572169	4572338	170	55 [44]	[51] 52	yjiS/yjiT	DUF1127 family protein/pseudogene

AATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACTTTGTGAATCTTAGAGGGTTGAGACAACCGGATGGCCGTCCTCTTTATGAATATCATGCAAC  >  NC_000913/4572249‑4572529                                                                                           |                                                                                                                                                                                               aaTAGTTGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGCTTTCTTTCAAATTAGAAATGTCGTGTGGTTTTGTTTTTGTa                                                                                                                                              >  2:544293/1‑141 (MQ=255)      aTGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCttt                                                                                                                                         >  2:435889/1‑141 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTtttcttt                                                                                                                                                                                >  1:63509/1‑74 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTtttcttt                                                                                                                                                                                <  4:63511/74‑1 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTAt                                                                                                                                             >  1:259292/1‑109 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTAt                                                                                                                                             <  4:259286/109‑1 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTAtctc                                                                                                                                   <  3:102081/119‑1 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTAtctc                                                                                                                                   >  2:102089/1‑119 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAgg                                                                                                                              <  3:133984/124‑1 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAgg                                                                                                                              >  2:133992/1‑124 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAgcttgct                                                                                                                      >  3:100997/1‑132 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAgcttgct                                                                                                                      >  3:490477/1‑132 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTggg                                                                                                                 <  2:490492/137‑1 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCaa                                                                                                             >  2:207914/1‑141 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCaa                                                                                                             >  2:361342/1‑141 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATAc                                                                                                    >  4:200513/1‑150 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATAc                                                                                                    >  4:46184/1‑150 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATg                                                                                   <  1:46183/167‑1 (MQ=255)                                  gATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGCTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAgcttgct                                                                                                                      >  3:399656/1‑132 (MQ=255)                                     ttATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAgg                                                                                                                              >  4:829542/1‑121 (MQ=255)                                     ttATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAgg                                                                                                                              <  1:829611/121‑1 (MQ=255)                                     ttATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCa                                                                                                          <  2:101005/141‑1 (MQ=255)                                     ttATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACAtt                                                                                                 >  4:596912/1‑150 (MQ=255)                                     ttATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACTTTGTGAATCTTagag                                                <  1:596967/199‑1 (MQ=255)                                          gTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCa                                                                                                              >  3:177524/1‑132 (MQ=255)                                                        aaaTAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGTTaa                                                                                       >  2:356762/1‑141 (MQ=255)                                                        aaaTAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACtt                                                                              >  4:648985/1‑150 (MQ=255)                                                                          gAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACTTtg                                                            >  4:496089/1‑150 (MQ=255)                                                                             tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTa                                                                  >  2:876663/1‑141 (MQ=255)                                                                                cTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAANNGTTGTGGNNNNNNNTTTTTGTNNNTNNNATCTCTANNNNNNNTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACTTTGTGAATCTTAGAGGGTTGAGACAACCGGATGGCCGTCCTCTTTATGAatatnnnnnn    >  1:166231/1‑194 (MQ=255)                                                                                cTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAgc                                                                                                                           <  4:49803/81‑1 (MQ=255)                                                                                cTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAgc                                                                                                                           >  1:49802/1‑81 (MQ=255)                                                                                cTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATAc                                                                                                    >  3:635307/1‑104 (MQ=255)                                                                                cTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATAc                                                                                                    <  2:635323/104‑1 (MQ=255)                                                                                cTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGc                                                                        >  3:228091/1‑132 (MQ=255)                                                                                cTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGc                                                                        >  3:439225/1‑132 (MQ=255)                                                                                cTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACt                                                               >  2:6336/1‑141 (MQ=255)                                                                                cTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACt                                                               >  2:516741/1‑141 (MQ=255)                                                                                cTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACt                                                               >  2:357358/1‑141 (MQ=255)                                                                                cTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACTTTGTGAATCTTAGAGGGTTGAGACAACCGGATGGCCGTCCTCTTTATGAATATCATGCa    >  1:496205/1‑200 (MQ=255)                                                                                cTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACTTTGTGAATCTTAGAGGGTTGAGACAACCGGATGGCCGTCCTCTTTATGAATATCATGCa    >  1:114490/1‑200 (MQ=255)                                                                                cTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGCTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGc                                                                        >  3:194815/1‑132 (MQ=255)                                                                                  ataCAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACTTTGTGAATCTTAGAGGGTTGAGACAACCGGATGGCCGTCCTCTTTATGAATATCATGCAAc  >  1:490375/1‑200 (MQ=255)                                                                                    aCAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCGGAATACAt                                                                                                  <  3:49777/102‑1 (MQ=255)                                                                                    aCAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCGGAATACAt                                                                                                  >  2:49779/1‑102 (MQ=255)                                                                                    aCAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATAc                                                                                                    >  3:83713/1‑100 (MQ=255)                                                                                    aCAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATAc                                                                                                    <  2:83717/100‑1 (MQ=255)                                                                                         atTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGTGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATc                                                                                                           <  3:808366/88‑1 (MQ=255)                                                                                         atTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATc                                                                                                           >  2:808392/1‑88 (MQ=255)                                                                                           tCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACTTTGTGAATCtt                                                    >  2:497922/1‑141 (MQ=255)                                                                                           tCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACTTTGTGAATCTTAGAGGGTTg                                           >  4:251889/1‑150 (MQ=255)                                                                                           tCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACTTTGTGAATCTTAGAGGGTTGAGACAACCGGATGGCCGTCctc                     <  1:251895/172‑1 (MQ=255)                                                                                           |                                                                                                                                                                                               AATAGATGGTTGATATCATTTTTATCTAAAATTGATTTATAGTATCGACCTGAAAAAATAGTTGTTGCCGCCTGAGTAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCTTTTATCTCTAAGGAGCTTGCTTTGGGTCAATCAGAATACATTTCATGGGTAAAATGTACTTCCTGGCTAAGTAACTTTGTGAATCTTAGAGGGTTGAGACAACCGGATGGCCGTCCTCTTTATGAATATCATGCAAC  >  NC_000913/4572249‑4572529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.