Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_000913	3,608,682	0	T→C	11.1%	10.1 ‑8.8 0.0	83	intergenic (+33/+69)	zntA/tusA	zinc, cobalt and lead efflux system/mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase
Rejected: Polymorphism prediction not supported by minimum number of reads on both strands.
Rejected: Prediction has biased read strand distribution supporting polymorphism.
Reads supporting (aligned to +/- strand):  new base (0/9):  ref base (48/24):  total (49/34)
Fisher's exact test strand distribution p-value = 1.48e-04
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00

CACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATC  >  NC_000913/3608485‑3608877                                                                                                                                                                                                         |                                                                                                                                                                                                      cACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGAT‑AGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTccc                                                                                                                                                                                                    >  1:861649/1‑200 (MQ=255)   cGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACAGATCGCAACA‑TGGAGCGCGATCGGTaccc                                                                                                                                                                                                   >  1:479463/1‑200 (MQ=255)          atCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGcccc                                                                                                                                                                                            <  1:262824/200‑1 (MQ=255)          atCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGcccc                                                                                                                                                                                            <  1:404725/200‑1 (MQ=255)                       tCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAggg                                                                                                                                                                               >  1:346078/1‑200 (MQ=255)                       tCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAggg                                                                                                                                                                               >  1:415043/1‑200 (MQ=255)                          cTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTa                                                                                                                                                                            >  1:14267/1‑200 (MQ=255)                          cTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTGGTGGCTGGCAGTGCTGGCAGATACGGGGGCGCCGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCCCTGGGGAGAGGGTTa                                                                                                                                                                            >  1:174564/1‑200 (MQ=255)                             ttGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg                                                                                                                                                                         <  1:720147/200‑1 (MQ=255)                             ttGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg                                                                                                                                                                         <  1:177157/200‑1 (MQ=255)                             ttGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg                                                                                                                                                                         <  1:320687/200‑1 (MQ=255)                                                      ccTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCt                                                                                                                                                                                                  >  4:469577/1‑150 (MQ=255)                                                      ccTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGc                                                                                                                                              >  1:702336/1‑200 (MQ=255)                                                         cGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCaa                                                                                                                                           >  1:590083/1‑200 (MQ=255)                                                           tCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATc                                                                                                                                         >  1:252089/1‑200 (MQ=255)                                                                 cGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTgg                                                                                                                                                                                       <  4:388526/150‑1 (MQ=255)                                                                 cGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGACCCCTCGCCCCTCTGGGGAGAGGGTTAGGGAGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGcccc                                                                                                                                   >  1:854136/1‑200 (MQ=255)                                                                  gCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGAT‑AGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTgggg                                                                                                                                                                                     <  4:861580/150‑1 (MQ=255)                                                                   cttttAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGGCGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTgggg                                                                                                                                                                                     <  4:148758/147‑1 (MQ=255)                                                                   cTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGACTGCGTTAAGAT‑TGTTGCGCAGGCGTTAAGGCAAACCGATCTCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTgggg                                                                                                                                                                                     >  4:427212/1‑150 (MQ=255)                                                                   cTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGcc                                                                                                                                                                                              >  2:125117/1‑141 (MQ=255)                                                                   cTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGcc                                                                                                                                                                                              >  2:751462/1‑141 (MQ=255)                                                                   cTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGgag                                                                                                                                                                                   <  1:427256/152‑1 (MQ=255)                                                                   cTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTa                                                                                                                                 >  1:913734/1‑200 (MQ=255)                                                                   cTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TCGAGCGCGATCGGt                                                                                                                                                                                                       >  3:319078/1‑132 (MQ=255)                                                                     gtgaGGGATGACCGGGTTGTGGCTGGCAGTGCGGGCAGATACGGGGGCGACGGTGCGGGTGACA‑GCGAATGCGTTAAGCT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCACTCCggggcg                                                                                                                                                                                   >  4:633474/4‑148 (MQ=255)                                                                     gTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GTGAATGCGTTAAGCT‑TGCTGCGCAGGAGTAAAGGCAAACCGCTTGCAACA‑TTGAGCGCGATCGTTcc                                                                                                                                                                                                     >  3:615599/1‑132 (MQ=255)                                                                     gTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTcc                                                                                                                                                                                                     <  3:151347/132‑1 (MQ=255)                                                                     gTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGcccc                                                                                                                                                                                            >  2:876484/1‑141 (MQ=255)                                                                     gTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGgag                                                                                                                                                                                   >  4:812272/1‑150 (MQ=255)                                                                         gggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAACCAGCCCCTATCAAcc                                                                                                                           >  1:925073/1‑200 (MQ=255)                                                                            aTGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTgggg                                                                                                                                                                                     <  2:10025/141‑1 (MQ=255)                                                                            aTGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTgggg                                                                                                                                                                                     <  2:225396/141‑1 (MQ=255)                                                                               aCCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGGGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg                                                                                                                                                                         <  4:673616/150‑1 (MQ=255)                                                                               aCCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg                                                                                                                                                                         >  4:381846/1‑150 (MQ=255)                                                                               aCCGGGTTGTGGCTGGCAGGGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑GTGAGCGCGATCGGGCCCCTCGCCCCTCTGGGGAGAGGGTTAggg                                                                                                                                                                         <  4:81592/150‑1 (MQ=255)                                                                                 cGGGTTGTGGCTGGGAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAgg                                                                                                                                                                                <  2:323257/141‑1 (MQ=255)                                                                                     tggtgGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTgggg                                                                                                                                                                                     <  3:803684/130‑1 (MQ=255)                                                                                        tggctggcAGTGCTGACAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg                                                                                                                                                                         <  2:131767/141‑1 (MQ=255)                                                                                         ggctggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGt                                                                                                                                                                        >  2:229189/1‑141 (MQ=255)                                                                                         ggctggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑aaa                                                                                                                                                             <  4:174561/150‑1 (MQ=255)                                                                                          gctggcAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTg                                                                                                                                                                       <  2:809001/141‑1 (MQ=255)                                                                                               cAGTGCTAGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAggg‑g                                                                                                                                                                 <  2:763830/141‑1 (MQ=255)                                                                                                 gTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg                                                                                                                                                                         <  3:13832/132‑1 (MQ=255)                                                                                                 gTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATa                                                                                                   >  1:817889/1‑200 (MQ=255)                                                                                                  tGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGt                                                                                                                                                                        >  3:657957/1‑132 (MQ=255)                                                                                                     gggaaaatcggggggGGACGGTGGTGGT‑ACAGGCGACTGCGTAAAGAT‑TGTTGCGCAGGAGATAAGGAAAACGGACAGCAAAT‑TTGGGCGGGACCGGCCCCCCCCCCCCTTTGGGGAGAGGGTTAGGGGGGGGG‑A‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGc                                                                                               <  1:401223/190‑1 (MQ=255)                                                                                                      ggCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGTCCCTCCGGGGAGAGGGTTAGGGTGAgg                                                                                                                                                                    >  3:234178/1‑132 (MQ=255)                                                                                                      ggCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGCTAGGGTGAGGG‑G‑AAAAggc                                                                                                                                                         >  2:827684/1‑141 (MQ=255)                                                                                                              cGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGGGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAgg                                                                                                                                                          <  3:229180/132‑1 (MQ=255)                                                                                                                       gggggcgggTGCCA‑GGGAATGGGTTAAGTT‑TGTGGGGAAGGAGAAAAGGAAACCCGTTCGCAAAT‑TTGGGCGGGACCGGCCCCCCCCCCCCTCGGGGGAGGGGTTTAGGGTGGGGG‑A‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATc                                                                                                                               <  4:346056/143‑1 (MQ=255)                                                                                                                       cGGTGCTGGTACCA‑GCGCATG‑ATTAAGGTGTGTGGGGCGAGAGATAATGCAATCCTGACGAAACG‑TGGAGGGGGCTCGTTCCCCTCCCCTTTGTGGAGGGGGGGTTGGGTTGGGGG‑G‑CAAAGGCGGCATCGAAGCCAATCAGCCCCTATc                                                                                                                               <  4:764765/150‑1 (MQ=255)                                                                                                                         gTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAATA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGc                                                                           >  1:565311/1‑200 (MQ=255)                                                                                                                         gTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAg                                                                                                                                               >  3:503222/1‑132 (MQ=255)                                                                                                                         gTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGc                                                                                                                                      >  2:792508/1‑141 (MQ=255)                                                                                                                         gTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGc                                                                                                                                      >  2:153478/1‑141 (MQ=255)                                                                                                                         gTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGc                                                                           >  1:35079/1‑200 (MQ=255)                                                                                                                         gTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGc                                                                           >  1:692023/1‑200 (MQ=255)                                                                                                                         gTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAACGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGc                                                                           >  1:175910/1‑200 (MQ=255)                                                                                                                           ggtgggggcgggCGAATGGTTTAAGAT‑GGTTGGACAGGAAAAAAGGCAAACCTATCGAAACT‑GTGGGCGCGATGGTTCCCCCCCCCCCTCTGGTGAAGGTGTTGGGTTGAGCG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAAc                                                                                                                            <  4:650071/139‑1 (MQ=255)                                                                                                                                   cA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCAAATCAGcc                                                                                                                                     >  3:641909/1‑132 (MQ=255)                                                                                                                                    cggcgatggCGTAAAGTT‑TGTTGAGCAGAAGAAAAGGAAAACCGATCGCAACA‑TGGGGCGCGGCCGGCCCCCTCGCCCCTCTGGGAGGGGGGTTGGGGTGGGGG‑A‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCg                                                                 <  1:533843/192‑1 (MQ=255)                                                                                                                                      gCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCgtg                                                               >  1:170435/1‑200 (MQ=255)                                                                                                                                            ggggtaaggtgtgtggCGGAGGAAAGAAGGGAAACGGATCGCAGCA‑TGGGGCGCGATGGGCCCCCCCGCCCCTCTGGGGAGGGGGTGAGGGTGAGGG‑A‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCa                                                                                                                              <  3:264209/121‑1 (MQ=255)                                                                                                                                             cGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGCGGG‑G‑AAACGGCGGCATCGAAGCCAATCAGCCCCTATCAAc                                                                                                                            >  3:287960/1‑132 (MQ=255)                                                                                                                                                taggtt‑tgttgCGCAGGAGAAAGGGAAACCCGATCGCAAAT‑TGGGGCGCGACCGGCCCCCTCGCCCCTCGGGGGGGGGGGTTAGGGGGGGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGc                                                                                                                         <  3:293718/127‑1 (MQ=255)                                                                                                                                                 aaGAT‑GGTTGCGCAGGAGATAAGGCAAACCGATCGAAAAA‑TTGGGCGCGTTGGGCCCCCCCGCCCCTGTGGGGGGGGGGTTGGGGGGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAgg                                                    <  1:121737/200‑1 (MQ=255)                                                                                                                                                           ccgaaGGAAAAAAGGCAAACCGTCCGCAAAA‑TTGGGCGCGATCGGCCCCCCCGCCCCTGGGGGGGGGGGGTT‑GGGTGGGGG‑GAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAAcc                                           <  1:814254/196‑1 (MQ=255)                                                                                                                                                                ggAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAg                                                                                                 >  2:741465/1‑141 (MQ=255)                                                                                                                                                                ggAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTAACGAATCAAAt                                                                                                          >  3:645106/1‑132 (MQ=255)                                                                                                                                                                  agaTAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGc                                                                                               >  2:196898/1‑141 (MQ=255)                                                                                                                                                                  agaTAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGc                                                                                               >  2:650211/1‑141 (MQ=255)                                                                                                                                                                  agaTAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATcc                                                                                      >  4:800950/1‑150 (MQ=255)                                                                                                                                                                  agaTAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAat                                    >  1:773563/1‑200 (MQ=255)                                                                                                                                                                      aagcaaaaCCGATCGAAAAT‑TTGGGGGCGTTGGGCCCCCTCGCCCCTGTGGGGAGAGGGTTGGGGTGGGGG‑A‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATcg                                <  1:812338/195‑1 (MQ=255)                                                                                                                                                                       agggcaaCCGAACGGAACAGTGGAGCGGGCTCGGTCCCCTCCCCCTTCGGGGGAGGGGGTTAGGGTGGGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGAt                                                                                                    <  3:395220/127‑1 (MQ=255)                                                                                                                                                                                  tCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCAt                                                                                        >  3:109325/1‑132 (MQ=255)                                                                                                                                                                                     cAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGa                 >  1:840935/1‑200 (MQ=255)                                                                                                                                                                                       aCA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGAtc               >  1:817360/1‑200 (MQ=255)                                                                                                                                                                                                    aTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAAcc                                                                       >  3:229632/1‑132 (MQ=255)                                                                                                                                                                                                    aTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCgtgt                                                              >  2:689592/1‑141 (MQ=255)                                                                                                                                                                                                     tCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATc  >  1:137705/1‑200 (MQ=255)                                                                                                                                                                                                      cGGCCCCCGCGCCCGTGGGGGGAGAGAG‑GAGGGAGAGGGAA‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTc                                                            <  2:251435/141‑1 (MQ=255)                                                                                                                                                                                                        gTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCa                                                          >  2:297097/1‑141 (MQ=255)                                                                                                                                                                                                         |                                                                                                                                                                                                      CACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGACGGTGCTGGTGACA‑GCGAATGCGTTAAGAT‑TGTTGCGCAGGAGATAAGGCAAACCGATCGCAACA‑TTGAGCGCGATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGG‑G‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATC  >  NC_000913/3608485‑3608877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.