| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3876768 | 181 (1.770) | 3 (0.030) | 3/288 | 10.5 | 1.6% | coding (185/813 nt) | yidA | sugar phosphate phosphatase |
| ? | NC_000913 | = 3876814 | 198 (2.040) | coding (139/813 nt) | yidA | sugar phosphate phosphatase | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
AGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3876562‑3876768‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgcccgTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCACCGTGGCGCAAACTGCTCTCAGCTATGACGACTATCGTTTCCTGGAAAAACTCTCTCGCGAAGTCGGTTCTCATTTCCACGCCCTGGACCGCA < NC_000913/3876814‑3876616 AGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAG < 2:464463/200‑1AGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAG < 2:244646/200‑1AGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAG < 2:310199/200‑1 GGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGT > 2:2248/1‑200 TTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGC > 2:47432/1‑200 TTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGC > 2:395680/1‑200 TTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGC > 2:144726/1‑200 TTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGC > 2:321305/1‑200 TTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGC > 2:208237/1‑200 TTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGC > 2:266831/1‑200 GTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGTTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAG < 1:737431/150‑1 GTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAG < 1:21951/150‑1 GTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGGCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAG < 1:41925/150‑1 GGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTGATAGCTGAGAGCAGTTTGCGCCACTGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGACCG > 1:748760/1‑150 TCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAG < 3:729825/141‑1 GCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGCTACAAGTAATGCAGTAGTCGCCCGTATGCAGGTGTGCACAACTACCTGAAAGAGCTTCATATGGAACAGCCGGGCGACTACTGCCTTACTTATAACG > 4:741837/1‑132 TTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCGTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCAC > 1:512196/1‑150 GTAATGCAGTAGTCGCCCGTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCACCGTGGCGCAAACTGCTCTCAGCTATGACGACTATCGTTTCCTGGAAAAACTCTCTCGCGAAGTCGGTTCTCATT > 2:285612/1‑200 GCCCGTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCACCGTGGCGCAAACTGCTCTCAGCTATGACGACTATCGTTTCCTGGAAAAACTCTCTCGCGAAGTCGGTTCTCATTTCCACGCCCTGGAC < 2:378503/200‑1 GCCCGTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCACCGTGGCGCAAACTGCTCTCAGCTATGACGACTATCGTTTCCTGGAAAAACTCTCTCGCGAAGTCGGTTCTCATTTCCACGCCCTGGAC < 2:738434/200‑1 CCCGTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTTCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGATGATGGTAGCACCGTGGCGCAAACTGCTCTTAGCTATGACGACTATCGTTT > 1:644277/1‑150 CCCGTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGCAGGCCGCTGATGGTAGCACCGTGGCGCAAACTGCTCTCAGCTATGACGc > 3:522977/1‑140 CCCGTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCACCGTGGCGCAAACTGCTCTCAGCTATGACGACTATCGTTTCCTGGAAAAACTCTCTCGCGAAGTCGGTTCTCATTTCCACGCCCTGGACC > 2:170642/1‑200 CCCGTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCACCGTGGCGCAAACTGCTCTCAGCTATGACGACTATCGTTT > 1:777750/1‑150 GTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCACCGTGGCGCACACTGCTCTCAGCTATGACGACTA > 3:471731/1‑141 GTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCACCGTGGCGCAAACTGCTCTCAGCTATGACGACTATCGTTTCat > 1:446953/1‑148 GTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCACCGTGGCGCAAACTGCTCTCAGCTATGACGACTATCGTTTCCTGGAAAAACTCTCTCGCGAAGTCGGTTCTCATTTCCACGCCCTGGAC < 2:28118/196‑1 GTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCACCGTGGCGCAAACTGCTCTCAGCTATGACGACTATCGTTTCCTGGAAAAACTCTCTCGCGAAGTCGGTTCTCATTTCAACGCCCTGGACCGCA > 2:804442/1‑200 GTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCACCGTGGCGCAAACTGCTCTCAGCTATGACGACTATCGTTTCCT > 1:28116/1‑150 GTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCACCGTGGCGCAAACTGCTCTCAGCTA > 4:481097/1‑132 AGGATTCATGCACCGTGTAGTAGCTGATATCACGGTTGGCGGTGTACAGCGTGGTGCGGTCCAGGGCGTGGAAATGAGAACCGACTTCGCGAGAGAGTTTTTCCAGGAAACGATAGTCGTCATAGCTGAGAGCAGTTTGCGCCACGGTGCTACCATCAGCGGCCTTCTGTACCAGCGCGCCGTTATAAGTAATGCAGTAGTCGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3876562‑3876768‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgcccgTATGCAGGTGTGCACAACTACCTGAAAGAGCTGCATATGGAACAGCCGGGCGACTACTGCATTACTTATAACGGCGCGCTGGTACAGAAGGCCGCTGATGGTAGCACCGTGGCGCAAACTGCTCTCAGCTATGACGACTATCGTTTCCTGGAAAAACTCTCTCGCGAAGTCGGTTCTCATTTCCACGCCCTGGACCGCA < NC_000913/3876814‑3876616 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |