| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2093959 = | 108 (1.060) | 3 (0.030) | 3/292 | 10.6 | 2.8% | coding (492/1068 nt) | hisB | histidinol‑phosphatase and imidazoleglycerol‑phosphate dehydratase |
| ? | NC_000913 | 2093980 = | 102 (1.040) | coding (513/1068 nt) | hisB | histidinol‑phosphatase and imidazoleglycerol‑phosphate dehydratase | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
GTGTGGTGATCGTCGATATAGAGGTCGCCTTTGACGTTGATTTCCATGCGGAAACCGCCGTGGGTAGCGATCTGATCCAGCATATGATCAAAGAAGCCAACGCCGGTGTTAATCTTGCTGCCACCTTCACGATCCAGCCACACCTGAACGTCAATCTGCGTCTCTTTGGTATTACGCACTACGTGAGCGTAACGGTCACGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2094159‑2093959‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcacgtAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAAC > NC_000913/2093980‑2094124 GTGTGGTGATCGTCGATATAGAGGTCGCCTTTGACGTTGATTTCCATGCGGAAACCGCCGTGGGTAGCGATCTGATCCAGCATATGATCAAAGAAGCCAACGCCGGTGTTAATCTTGCTGCCACCTTCACGCTCCAGCCACACCTGAACGTCAATCTGCGTCTCTTTGGTATTTCGCACTACGTGAGCGTAACGGTCACG > 2:723100/1‑200GTGTGGTGATCGTCGATATAGAGGTCGCCTTTGACGTTGATTTCCATGCGGAAACCGCCGTGGGTAGCGATCTGATCCAGCATATGATCAAAGAAGCCAACGCCGGTGTTAATCTTGCTGCCACCTTCACGATCCAGCCACACCTGAACGTCAATCTGCGTCTCTTTGGTATTACGCACTACGTGAGCGTAACGGTCACG > 2:215904/1‑200GTGTGGTGATCGTCGATATAGAGGTCGCCTTTGACGTTGATTTCCATGCGGAAACCGCCGTGGGTAGCGATCTGATCCAGCATATGATCAAAGAAGCCAACGCCGGTGTTAATCTTGCTGCCACCTTCACGATCCAGCCACACCTGAACGTCAATCTGCGTCTCTTTGGTATTACGCACTACGTGAGCGTAACGGTCACG > 2:733709/1‑200 TGTGGTGATCGTCGATATAGAGGTCGCCTTTGACGTTGATTTCCATGCGGAAACCGCCGTGGGTAGCGATCTGATCCAGCATATGATCAAAGAAGCCAACGCCGGTGTTAATCTTGCTGCCACCTTCACGATCCAGCCACACCTGAACGTCAATCTGCGTCTCTTTGGTATCACGCACTACGTGAGCGTAACGGTCACGT < 2:443409/200‑1 GATCCAGCATATGATCAAAGAAGCCAACGCCGGTGTTAATCTTGCTGCCACCTTCACGATCCAGCCACACCTGAACGTCAATCTGCGTCTCTTTGGTATTACGCACTACGTGAGCGTAACGGTCA < 1:623706/125‑1 GATCCAGCATATGATCAAAGAAGCCAACGCCGGTGTTAATCTTGCTGCCACCTTCACGATCCAGCCACACCTGAACGTCAATCTGCGTCTCTTTGGTATTACGCACTACGTGAGCGTAACGGTCA > 2:623761/1‑125 AACGCCGGTGTTAATCTTGCTGCCACCTTCACGATCCAGCCACACCTGAACGTCAATCTGCGTCTCTTTGGTATTACGCACTACGTGAGCGTAACGGTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGG < 3:277135/141‑1 GTGTTAATCTTGCTGCCACCTTCACGATCCAGCCACACCTGAACGTCAATCTGCGTCTCTTTGGTATTACGCACTACGTGAGCGTAACGGTCACGTAGTGCGTAATACCAAAGAGAAGCAGATTGACGTTAAGGTGTGGCT > 3:349124/1‑141 GCTGCCACCTTCACGATCCAGCCACACCTGAACGTCAATCTGCGTCTCTTTGGTATTACGCACTACGTGAGCGTAACGGTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAG < 3:276121/141‑1 CACGTAGTGCGTAATACCNNNNNNACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCCACTCACGGCGGTTTCCGCATGGAAATCAAC > 1:757291/1‑150 CACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAAC > 1:713534/1‑150 CACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAAC > 1:684310/1‑150 CACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATG > 3:578724/1‑141 CACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATG > 3:588380/1‑141 CACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCTACCCACGGCGGT > 4:632919/1‑132 CACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCTACCCACGGCGGT > 4:95074/1‑132 CACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACAACGGCGTTGGCTTCTTTGATCATATGCTGGATCAGAGCGCTACCCACGGCGGTTTCCGCATG > 3:588964/1‑141 CGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCTACCCACGGCGGTTT > 4:339471/1‑132 CGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCTACCCACGGCGGTTT > 4:477483/1‑132 GTGTGGTGATCGTCGATATAGAGGTCGCCTTTGACGTTGATTTCCATGCGGAAACCGCCGTGGGTAGCGATCTGATCCAGCATATGATCAAAGAAGCCAACGCCGGTGTTAATCTTGCTGCCACCTTCACGATCCAGCCACACCTGAACGTCAATCTGCGTCTCTTTGGTATTACGCACTACGTGAGCGTAACGGTCACGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2094159‑2093959‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcacgtAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGATCGTGAAGGTGGCAGCAAGATTAACACCGGCGTTGGCTTCTTTGATCATATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAAC > NC_000913/2093980‑2094124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |