New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3686335 =233 (2.280)3 (0.030) 3/284 10.4 1.5% coding (2839/3474 nt) bcsC cellulose synthase subunit
?NC_000913 3686435 = 177 (1.850)coding (2739/3474 nt) bcsC cellulose synthase subunit
Rejected: Position hash score below cutoff.

Only 100 of 235 total aligned reads displayed.

TCTTTGTCGTAATGCCAGATCATGTTGTTCAGGCCGATTGTGACGCGGCGATTGTTCTGGTTAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATATCATCGCTGTAACTGATGCCGCCGACCACATCCACCACGTTGAAGCCCATCGGCGTGGTACCGATATCC  >  NC_000913/3686136‑3686534
                                                                                                                                                                                                       |                                                                                                                                                                                                       
tCTTTGTCGTAATGCCAGATCATGTTGTTCAGGCCGATTGTGACGCGGCGATTGTTCTGGTTAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCcac                                                                                                                                                                                                         >  2:580822/1‑200 (MQ=255)
     gTCGTAATGCCAGATCATGTTGTTCAGGCCGATTGTGACGCGGCGATTGTTCTGGTTAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGt                                                                                                                                                                                                    <  2:305352/200‑1 (MQ=255)
                  aTCATGTTGTTCAGGCCGATTGTGACGCGGCGATTGTTCTGGTTAATGACCT‑‑TAGAAATAACCCGTCACCCAGCGCACACGCCAGAGATATTTGCGACTTTTTCACGGGAACTGGGCGCGACGCAGAGAGACGCAGAGGCTGTGTGCGTCGCCTTTTTCGTGTCCCAGAGTGATACCCACACCGTGggggcatgtgcgcc                                                                                                                                                                                     >  2:810758/1‑188 (MQ=255)
                     aTGTTGTTCAGGCCGATTGTGACGCGGCGATTGTTCTGGTTAATGACCTTATAGTAATAGCCCGTCATCCAGCACACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCAGCACCGTCGGCACGTACGCCAcc                                                                                                                                                                                    >  2:44480/1‑200 (MQ=255)
                                           cgcgGCGATTGTTCTGGTTAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTc                                                                                                                                                              <  2:539105/200‑1 (MQ=255)
                                                   ttGTTCTGGTTAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCcaca                                                                                                                                                                                                        >  1:299570/1‑150 (MQ=255)
                                                    tGTTCTGGTTAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCacac                                                                                                                                                                                                       <  1:727369/150‑1 (MQ=255)
                                                     gTTCTGGTTAATGACCTTCTAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACCTTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACAcc                                                                                                                                                                                                      >  1:260245/1‑150 (MQ=255)
                                                     gTTCTGGTTAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTc                                                                                                                                                              <  2:45792/190‑1 (MQ=255)
                                                     gTTCTGGTTAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCtt                                                                                                                                                    >  2:590433/1‑200 (MQ=255)
                                                     gTTCTGGTTAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCtt                                                                                                                                                    >  2:270657/1‑200 (MQ=255)
                                                     gTTCTGGTTAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCAGGTATTGCTCGGGGAGTCtt                                                                                                                                                    >  2:568546/1‑200 (MQ=255)
                                                         tGGTTAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTg                                                                                                                                                <  2:509565/200‑1 (MQ=255)
                                                          ggTTAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGc                                                                                                                                               >  2:643481/1‑200 (MQ=255)
                                                           gTTAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGc                                                                                                                                                                                                >  1:769918/1‑150 (MQ=255)
                                                            ttAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGccc                                                                                                                                             <  2:769978/200‑1 (MQ=255)
                                                             tAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCacac                                                                                                                                                                                                       <  3:214575/141‑1 (MQ=255)
                                                                  aCCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCacac                                                                                                                                                                                                       >  1:45339/1‑136 (MQ=255)
                                                                  aCCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACg                                                                                                                                                                                         >  1:555964/1‑150 (MQ=255)
                                                                   ccTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAg                                                                                                                                      >  2:434337/1‑200 (MQ=255)
                                                                      tataGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCacac                                                                                                                                                                                                       <  4:734451/132‑1 (MQ=255)
                                                                        taGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCacac                                                                                                                                                                                                       <  1:12127/130‑1 (MQ=255)
                                                                        taGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGt                                                                                                                                                                                            >  3:355649/1‑141 (MQ=255)
                                                                        taGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGt                                                                                                                                                                                            >  3:461104/1‑141 (MQ=255)
                                                                        taGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGt                                                                                                                                                                                            >  3:586564/1‑141 (MQ=255)
                                                                         ggTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCACCACACCGTCGGCACGTa                                                                                                                                                                                           >  3:542888/2‑141 (MQ=255)
                                                                          gTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTAc                                                                                                                                                                                          >  3:348512/1‑141 (MQ=255)
                                                                          gTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTAc                                                                                                                                                                                          >  3:556025/1‑141 (MQ=255)
                                                                          gTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCa                                                                                                                                                                                 >  1:388218/1‑150 (MQ=255)
                                                                          gTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCa                                                                                                                                                                                 >  1:410787/1‑150 (MQ=255)
                                                                          gTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCa                                                                                                                                                                                 >  1:49876/1‑150 (MQ=255)
                                                                          gTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCa                                                                                                                               >  2:349055/1‑200 (MQ=255)
                                                                          gTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCa                                                                                                                               >  2:318912/1‑200 (MQ=255)
                                                                          gTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCa                                                                                                                               >  2:699394/1‑200 (MQ=255)
                                                                                gCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAAc                                                                                                                         <  2:410837/200‑1 (MQ=255)
                                                                                  ccGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTa                                                                                                                                                                                           >  4:630858/1‑132 (MQ=255)
                                                                                    gTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCg                                                                                                                                                                       >  1:680282/1‑150 (MQ=255)
                                                                                       aTCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCTTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCAtttt                                                                                                                                                                             >  3:478293/1‑141 (MQ=255)
                                                                                            gcgcACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCACAGGCCAGCAAAGAACTGGAGATGGGcc                                                                                                             >  2:464309/1‑200 (MQ=255)
                                                                                                   cgcCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCTCCACACCGTCGGCACGTACGCCACCCCATTTTTTc                                                                                                                                                                          >  4:596452/1‑132 (MQ=255)
                                                                                                   cgcCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTc                                                                                                                                                                          >  4:180000/1‑132 (MQ=255)
                                                                                                   cgcCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTg                                                                                                                                                                 >  3:243279/1‑141 (MQ=255)
                                                                                                      cAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTc                                                                                                                                                              <  3:724786/141‑1 (MQ=255)
                                                                                                        gTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGt                                                                                                                                                                     >  4:346045/1‑132 (MQ=255)
                                                                                                        gTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCACACACCGTCGGCACGTCCGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGt                                                                                                 >  2:560407/1‑200 (MQ=255)
                                                                                                             cTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGc                                                                                                                                                                >  4:482517/1‑132 (MQ=255)
                                                                                                                    aTTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCttttta                                                                                                                                                <  3:12809/141‑2 (MQ=255)
                                                                                                                     tttttACCTGTTAACTTGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTGATCGTTGCTCAGACTTAGCCCCACACCGTCGGCACGTACTCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTgtggggctaagtctgagct                                                                                    <  2:85674/200‑19 (MQ=255)
                                                                                                                     tttttACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAg                                                                                                                                      >  1:538365/1‑150 (MQ=255)
                                                                                                                      ttttACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAAccc                                                                                   <  2:573414/200‑1 (MQ=255)
                                                                                                                       tttACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGccc                                                                                                                                             <  3:33155/141‑1 (MQ=255)
                                                                                                                             ggTTTACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCCGTATTGCTCGGGGAGTCCTTTTg                                                                                                                                                >  4:222066/1‑132 (MQ=255)
                                                                                                                              gTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCCCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCcaa                                                                                                                             >  1:20400/1‑150 (MQ=255)
                                                                                                                              gTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCACAGACTTAGCCCCACACCGTCGGCCCGTACGCCACCCCATTTTATCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAACGGACAGCaac                                                                                                                             >  1:629855/1‑149 (MQ=255)
                                                                                                                                tAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGccc                                                                                                                                             <  4:444195/132‑1 (MQ=255)
                                                                                                                                  aCTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAAc                                                                                                                         <  1:11735/150‑1 (MQ=255)
                                                                                                                                     ggTCGCCACTAATCGATGCCCAGACGCCGTTTGTTTCCCCTTTATCGTAGCTCAGACTTATCCCCACACCGTCGGCACGTACGCCACCCCCTTTTTTCCTGGTATCCCTCGGCGACTCTTTCTGCCTACCAACGCCCCGCAAAGAAGTgg                                                                                                                      >  1:86439/1‑150 (MQ=255)
                                                                                                                                      gTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATatcat                                                                   <  2:171043/200‑1 (MQ=255)
                                                                                                                                        cGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATATCATCg                                                                 <  2:384843/200‑1 (MQ=255)
                                                                                                                                          ccACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGcc                                                                                                                                   >  4:100084/1‑132 (MQ=255)
                                                                                                                                          ccACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATg                                                                                                                 >  1:290541/1‑150 (MQ=255)
                                                                                                                                          ccACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATATCATCGCt                                                               >  2:317568/1‑200 (MQ=255)
                                                                                                                                          ccACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATATCATCGCt                                                               >  2:215302/1‑200 (MQ=255)
                                                                                                                                           cACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAAc                                                                                                                         <  3:254898/141‑1 (MQ=255)
                                                                                                                                             cTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGc                                                                                                              <  1:461349/150‑1 (MQ=255)
                                                                                                                                             cTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGc                                                                                                              <  1:501779/150‑1 (MQ=255)
                                                                                                                                                 gCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGCCTTAGCCTCACACCGTCGGCACGTATGCTACCTCATTTTTTCCCGGTATTGCTCGCTGAGTCTTTTTGCCCACCAACGGCCTGctacg                                                                                                                            >  4:294226/1‑128 (MQ=255)
                                                                                                                                                     tGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATATCATCGCTGTAACTGATgc                                                    <  2:47026/200‑1 (MQ=255)
                                                                                                                                                      gCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATatcatc                                                                  <  2:253591/185‑1 (MQ=255)
                                                                                                                                                       cccAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAgg                                                                                                                                     >  2:120960/1‑117 (MQ=255)
                                                                                                                                                         cAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTTCGCCACTCCATTTTTTCCCGGTATTGCTCGCGGAGTCTTTTTGCCCACCAAAGGCCAGCAACGAACTGtag                                                                                                                    >  4:561291/1‑132 (MQ=255)
                                                                                                                                                         cAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCATAGGCCAGCAAAGAACTggcg                                                                                                                    >  4:378713/1‑130 (MQ=255)
                                                                                                                                                         cAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGgag                                                                                                                    <  4:449703/132‑1 (MQ=255)
                                                                                                                                                         cAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCg                                                                                                  >  1:447150/1‑150 (MQ=255)
                                                                                                                                                           gACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGtt                                                                                                >  1:163296/1‑150 (MQ=255)
                                                                                                                                                             cGCCGTTTGCTTCACCTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAAc                                                                                             <  1:484752/150‑1 (MQ=255)
                                                                                                                                                               ccGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACg                                                                                            >  1:376456/1‑150 (MQ=255)
                                                                                                                                                                    tGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGtt                                                                                                >  3:572436/1‑141 (MQ=255)
                                                                                                                                                                     gCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCAACCCCATTTTTTCCCGGTATTGCCCGGGGAGTCTTTTTGTCCACCAAATGCCAGCAAAGAACTGGAGATGGGCCGACGGTCGGCGTTACCGgttgaa                                                                                      >  1:59050/1‑146 (MQ=255)
                                                                                                                                                                      cTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAAc                                                                                     <  1:219955/150‑1 (MQ=255)
                                                                                                                                                                          aCCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTgtggggctaagtc                                                                                          <  3:166057/141‑13 (MQ=255)
                                                                                                                                                                           ccTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGgtg                                                                                         >  3:666637/1‑141 (MQ=255)
                                                                                                                                                                                 gcGTAGCTCAGACGTAGCCCCACACCGTCGGCACGTACGCAACCACATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAAccc                                                                                   <  3:133946/140‑1 (MQ=255)
                                                                                                                                                                                  cGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACgg                                                                                           <  4:119321/132‑1 (MQ=255)
                                                                                                                                                                                      gCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTa                                                                                       >  4:684441/1‑132 (MQ=255)
                                                                                                                                                                                      gCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTa                                                                                       >  4:503560/1‑132 (MQ=255)
                                                                                                                                                                                      gCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCgg                                                                              >  3:619797/1‑141 (MQ=255)
                                                                                                                                                                                      gCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATatc                                                                     <  1:236844/150‑1 (MQ=255)
                                                                                                                                                                                      gCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATATCATCGCTGTAACTGATGCCGCCGACCACATCCACCACGTTGAAGCCCATCg                   >  2:548829/1‑200 (MQ=255)
                                                                                                                                                                                      gCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCCTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTa                                                                                       >  4:318525/1‑132 (MQ=255)
                                                                                                                                                                                           gACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGa                                                                         >  3:405783/1‑141 (MQ=255)
                                                                                                                                                                                           gACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGa                                                                         >  3:690893/1‑141 (MQ=255)
                                                                                                                                                                                           gACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGa                                                                         >  3:675374/1‑141 (MQ=255)
                                                                                                                                                                                            aCTTAGCCCTACACCGTCGTCACGTACGCCTCTTCATTCTTTCCCCGTACTTCTCGGGGAGTCTTCTTGCCCACCCAACGCCAGTAAAGTACTGGTTATGGGCCGACCGTGGGCGTTAACGGTGTAACCCAg                                                                                 >  4:456826/1‑132 (MQ=255)
                                                                                                                                                                                               tAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATATCATCGCTGTAACTGATGCCGCCGACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAc          >  2:785214/1‑200 (MQ=255)
                                                                                                                                                                                               tAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATATCATCGCTGTAACTGATGCCGCCGACCACATCCACCACGTTGAAGCCCATCGGCGTGGTAc          <  2:77428/200‑1 (MQ=255)
                                                                                                                                                                                                 gCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCACAGAACTGGAGATGGGCCCACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATACCATAACCGTAAc                                                          >  1:618935/1‑150 (MQ=255)
                                                                                                                                                                                                 gCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATatcat                                                                   >  3:450065/1‑141 (MQ=255)
                                                                                                                                                                                                   cccACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATATCATCGCTGTAACTGATGCCGCCGACCACATCCACCACGTTGAAGCCCATCGGCGTGGTACCGat      <  2:680340/200‑1 (MQ=255)
                                                                                                                                                                                                       cacCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGTGCGTAACGGGTGTAACCCACCGGCCGGATATCATCCCTGTAATTGATGCAGCCGACCACTTCCACAAAGTTAAATCCCATCGGCGTGGCCCCGGTATcg  >  2:556036/1‑199 (MQ=255)
                                                                                                                                                                                                       |                                                                                                                                                                                                       
TCTTTGTCGTAATGCCAGATCATGTTGTTCAGGCCGATTGTGACGCGGCGATTGTTCTGGTTAATGACCTTATAGTAATAGCCCGTCATCCAGCGCACGCGCCAGTTATCTTCGACATTTTTACCGGTTAACTGGTCGCCACTAAGCGATGCCCAGACGCCGTTTGCTTCACCTTTATCGTAGCTCAGACTTAGCCCCACACCGTCGGCACGTACGCCACCCCATTTTTTCCCGGTATTGCTCGGGGAGTCTTTTTGCCCACCAAAGGCCAGCAAAGAACTGGAGATGGGCCGACGGTGGGCGTTAACGGTGTAACCCAGCGGCCCGATATCATCGCTGTAACTGATGCCGCCGACCACATCCACCACGTTGAAGCCCATCGGCGTGGTACCGATATCC  >  NC_000913/3686136‑3686534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.