New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3528193 =104 (1.020)3 (0.030) 3/292 10.6 2.9% coding (1725/2136 nt) yrfF putative RcsCDB‑response attenuator, inner membrane protein
?NC_000913 3528278 = 98 (1.000)coding (1810/2136 nt) yrfF putative RcsCDB‑response attenuator, inner membrane protein
Rejected: Position hash score below cutoff.

Only 100 of 105 total aligned reads displayed.

CTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCAATGGTACGCAGCA  >  NC_000913/3528008‑3528387
                                                                                                                                                                                         |                                                                                                                                                                                                  
ctcAGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGAt                                                                                                                                                                                      >  2:700922/1‑200 (MQ=255)
        cAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGcg                                                                                                                                                                              >  2:452029/1‑200 (MQ=255)
        cAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGcg                                                                                                                                                                              >  2:100819/1‑200 (MQ=255)
              cgACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTc                                                                                                                                                                                  <  2:47666/189‑1 (MQ=255)
               gACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAgg                                                                                                                                                                       >  2:784807/1‑200 (MQ=255)
                    ggACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCg                                                                                                                                                                  >  2:758604/1‑200 (MQ=255)
                             ggTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTttgttg                                                                                                                                                         >  2:801293/1‑200 (MQ=255)
                             ggTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTttgttg                                                                                                                                                         >  2:31508/1‑200 (MQ=255)
                                  aaCGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAg                                                                                                                                                    <  2:96453/200‑1 (MQ=255)
                                        ccAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTCATGCGTGATAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCcggcg                                                                                                                                                                                                >  1:504622/1‑150 (MQ=255)
                                                gggAAGCTGGATGGCGTAAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTACGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGc                                                                                                                                      <  2:312590/200‑1 (MQ=255)
                                                  gAAGCTCGAGTGCGTGAATGTGTTATTACGCCCGGGGAGTGCGGGATCGCTGTATAGCCTGGTGTCAACCTCCACCGCGTCGTTTATCACGCATGAAACGGCTGGAGCTGCACGATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGAt                                                                                                                                                                                      <  1:468602/150‑1 (MQ=255)
                                                            ggCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGCCAACCTCCACCGCCCCGTTTATCACGCATGAAACGGCGCCAGCGGCACAACCACTAACCAGTCCGGCCCCcggcgca                                                                                                                                                                                              >  4:630526/1‑130 (MQ=255)
                                                             gCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGAc                                                                                                                         <  2:549718/200‑1 (MQ=255)
                                                                   aTGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGcg                                                                                                                                                                              >  3:518436/1‑141 (MQ=255)
                                                                     gtgtTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGAtt                                                                                                                                                                                     >  4:341934/1‑132 (MQ=255)
                                                                       gtTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGcgacga                                                                                                                                                                          >  3:259476/1‑141 (MQ=255)
                                                                                cccGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGa                                                                                                                                                                 >  3:428996/1‑141 (MQ=255)
                                                                                  cGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATc                                                                                                                                                      <  1:133942/150‑1 (MQ=255)
                                                                                       aGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGccc                                                                                                                                                 <  1:243258/150‑1 (MQ=255)
                                                                                        gTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCAATTTTGTTGATCAGCCCt                                                                                                                                                >  1:191092/1‑150 (MQ=255)
                                                                                          gCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGAt                                                                                                                                                                <  4:686078/132‑1 (MQ=255)
                                                                                           cGGAATCGCTCGATAACCTGGTGGCACCCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATc                                                                                                                                                      <  3:309631/141‑1 (MQ=255)
                                                                                            gtaaTCGCGGGATAACCAGGTGGCAACCTCCACCGCTCCTTTTATCACGCATGAAACGGCGCGCGCGGCACAATCACTAAACAGGCCGGCCCCAGGCCGATTCCTGATTGTATGGGCCGAAGGCAGCAATTTTGTTGCTCAGCCCTGGcc                                                                                                                                            <  1:214252/148‑1 (MQ=255)
                                                                                            ggAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGcc                                                                                                                                            <  1:42944/150‑1 (MQ=255)
                                                                                            ggAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGcc                                                                                                                                            <  1:742184/150‑1 (MQ=255)
                                                                                             gAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGAtttt                                                                                                                                                             >  4:441016/1‑132 (MQ=255)
                                                                                               aTCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAGACAGTCCGGCCACCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTttgt                                                                                                                                                           <  4:524209/132‑1 (MQ=255)
                                                                                                tCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCg                                                                                                                                        >  1:223011/1‑150 (MQ=255)
                                                                                                   cTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGAATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACt                                                                                   <  2:455304/200‑1 (MQ=255)
                                                                                                     ggATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGcc                                                                                                                                            >  3:218213/1‑141 (MQ=255)
                                                                                                     ggATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGcc                                                                                                                                            <  3:96352/141‑1 (MQ=255)
                                                                                                     ggATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGcc                                                                                                                                            <  3:476919/141‑1 (MQ=255)
                                                                                                     ggATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGcc                                                                                                                                            >  3:3718/1‑141 (MQ=255)
                                                                                                       aTAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCAc                                                                                                                                 <  1:684860/150‑1 (MQ=255)
                                                                                                       aTAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCAc                                                                                                                                 <  1:618450/150‑1 (MQ=255)
                                                                                                          aCCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCgg                                                                                                                                       >  3:364701/1‑141 (MQ=255)
                                                                                                          aCCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACttt                                                                                                                              >  1:658372/1‑150 (MQ=255)
                                                                                                              ggtggCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGcc                                                                                                                                            <  4:6031/132‑1 (MQ=255)
                                                                                                              ggtggCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGcc                                                                                                                                            >  4:611544/1‑132 (MQ=255)
                                                                                                              ggtggCAACCTCCACCGCGCCGTTTATCACGCAAGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGTTCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGc                                                                        >  2:367499/1‑200 (MQ=255)
                                                                                                               gtggCCACCTCCACCGCTCCTGTTACCGCGCATGAAACGGCCCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCAGATTCCTGATTGTCAACGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGAc                                                                                                                         <  1:176755/150‑1 (MQ=255)
                                                                                                               gtggCAACCTCCACCGCGCCGTTTATCACGCATGAAACGTCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGAc                                                                                                                         <  1:151959/150‑1 (MQ=255)
                                                                                                               gtggCAACCTCCACCGCGCCGTTTATCACGCAGGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGAc                                                                                                                         <  1:231205/150‑1 (MQ=255)
                                                                                                               gtggCAACCTCCACCGAGCCGTTTATCACGCATTAGACGGCGCGAGCGGCACAATCACTAAACGGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGAc                                                                                                                         <  1:170209/150‑1 (MQ=255)
                                                                                                                      ccTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACg                                                                                                                           >  3:159189/1‑141 (MQ=255)
                                                                                                                      ccTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACccgc                                                                                                                  >  1:407031/1‑150 (MQ=255)
                                                                                                                        tCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGAc                                                                                                                         <  3:313347/141‑1 (MQ=255)
                                                                                                                         ccACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCAc                                                                                                                                 >  4:578076/1‑132 (MQ=255)
                                                                                                                         ccACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCAc                                                                                                                                 <  4:314619/132‑1 (MQ=255)
                                                                                                                         ccACCGCGCCGTTTATCACGCAGGAAACGGGGCGGGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCAc                                                                                                                                 <  4:48275/132‑1 (MQ=255)
                                                                                                                                 ccGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGAc                                                                                                                         <  4:3718/132‑1 (MQ=255)
                                                                                                                                 ccGTGTAGCACGCATGAAACGGCGCGCGCGGCACAATCACTAAACAGTCCGACCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCAGCACTTTACGACTACCCGCCGCAAGAACAg                                                                                                       <  1:102556/150‑1 (MQ=255)
                                                                                                                                   gTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGcc                                                                                                                                            >  3:281612/1‑111 (MQ=255)
                                                                                                                                   gTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTa                                                                                                                       >  4:467163/1‑132 (MQ=255)
                                                                                                                                   gTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCa                                                                                                              >  3:343324/1‑141 (MQ=255)
                                                                                                                                   gTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCa                                                                                                              >  3:140985/1‑141 (MQ=255)
                                                                                                                                   gTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACg                                                   >  2:611405/1‑200 (MQ=255)
                                                                                                                                   gTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACg                                                   >  2:565892/1‑200 (MQ=255)
                                                                                                                                      gaTCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGaa                                                                                                  <  1:524259/149‑1 (MQ=255)
                                                                                                                                            gCATGAAACGGCGCGAGCGGCACAACCACTAAAAAGTACGGCCCCCGGCGGATTTCTGATTGTCAGCGACGAAGGCAGTGATTTCGTTGATAAGCCCTTGCCTTCGGCATCAATTTACGACTACACGCCGCAAGAACAGTg                                                                                                     >  3:166496/1‑141 (MQ=255)
                                                                                                                                                      gcggGAGCGGCACAAGCACTAAACAGTCCGGCCCGCGGCGGATGCCTGATTGTCAGCGACGAAGGCGGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGGCTACCCGGCGCAAGAACAGTgg                                                                                                    <  4:417341/132‑1 (MQ=255)
                                                                                                                                                      gcgcGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTgg                                                                                                    <  4:453530/132‑1 (MQ=255)
                                                                                                                                                      gcgcGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTgg                                                                                                    <  4:736574/132‑1 (MQ=255)
                                                                                                                                                           agcgccgtaaTCACTAAACTGTCCGGCCCCGTGCGCATTCCTGATTGTAAGCGACGAAGGTAGCGATTTTGTGGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGc                                                                                               <  4:253809/124‑1 (MQ=255)
                                                                                                                                                                cacaATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTcc                                                                                          >  4:366349/1‑132 (MQ=255)
                                                                                                                                                                    aTCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGAt                                                                    >  1:637919/1‑150 (MQ=255)
                                                                                                                                                                    aTCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACg                  >  2:775684/1‑200 (MQ=255)
                                                                                                                                                                    aTCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACg                  >  2:30482/1‑200 (MQ=255)
                                                                                                                                                                     tCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACaa                                                                            >  3:656378/1‑141 (MQ=255)
                                                                                                                                                                     tCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACaa                                                                            >  3:354468/1‑141 (MQ=255)
                                                                                                                                                                     tCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATg                                                                   >  1:281757/1‑150 (MQ=255)
                                                                                                                                                                     tCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATg                                                                   >  1:72208/1‑150 (MQ=255)
                                                                                                                                                                     tCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGc                 >  2:700629/1‑200 (MQ=255)
                                                                                                                                                                     tCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGc                 >  2:822601/1‑200 (MQ=255)
                                                                                                                                                                     tCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGc                 >  2:536572/1‑200 (MQ=255)
                                                                                                                                                                     tCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGc                 >  2:57310/1‑200 (MQ=255)
                                                                                                                                                                     gcACTAAACAGTCCGTCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTCGTTGATCTGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCCACAATGCTGATg                                                                   >  1:327089/2‑150 (MQ=255)
                                                                                                                                                                      cACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGCACGCTTTCCAGACAc                                                                                    >  4:158875/1‑132 (MQ=255)
                                                                                                                                                                      cACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACaaa                                                                           >  3:473984/1‑141 (MQ=255)
                                                                                                                                                                        cTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCaa              >  2:56561/1‑200 (MQ=255)
                                                                                                                                                                          aaaCAGTCGGGACCGCGGCGGATTCTTGATTGACAGCGACGTAGGCTTCGATTTTGTGGATCAGCCCTGGCTTTCGGGACCACTGTTCGACTACCTGTCGTCAGGACAGTGGTACGCTTTCCAGAAACTGGCACAAATGCTGATGCATAc                                                              <  1:463621/150‑1 (MQ=255)
                                                                                                                                                                          aaaCAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGc                                                                                >  4:658372/1‑132 (MQ=255)
                                                                                                                                                                          aaaCAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCAATg            >  2:71710/1‑200 (MQ=255)
                                                                                                                                                                          aaaCAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCAATg            >  2:593789/1‑200 (MQ=255)
                                                                                                                                                                           aaCAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCAATgg           <  2:215506/200‑1 (MQ=255)
                                                                                                                                                                            aCAGTCCGGCCCCGGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGc                                                            <  1:167555/150‑1 (MQ=255)
                                                                                                                                                                            aCAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGc                                                            <  1:450857/150‑1 (MQ=255)
                                                                                                                                                                               gTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGc                                                                  >  3:429942/1‑141 (MQ=255)
                                                                                                                                                                               gTCCGGCCCCCGGCGGATTCCTGACTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACaaa                                                                           >  4:447245/1‑132 (MQ=255)
                                                                                                                                                                                tCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTTCCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCAATGGTACgc      <  2:101472/200‑1 (MQ=255)
                                                                                                                                                                                   ggCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCAATGGTACgcagc   <  2:511802/200‑1 (MQ=255)
                                                                                                                                                                                    gCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGCTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCAATGGTACgcagca  >  2:514190/1‑200 (MQ=255)
                                                                                                                                                                                    gCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATAAGCCGTTTAAc                                                    >  1:490022/1‑150 (MQ=255)
                                                                                                                                                                                     cccccGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGc                                                            <  3:638600/141‑1 (MQ=255)
                                                                                                                                                                                      ccccGGCGGTGTCCTGTTGTTCAGCGACGAAGTCAGCTATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACATTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGGCGTTTAACGc                                                  <  1:732455/150‑1 (MQ=255)
                                                                                                                                                                                      ccccGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACCAATGCTGAt                                                                    >  4:680924/1‑132 (MQ=255)
                                                                                                                                                                                      ccccGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGc                                                  <  1:565840/150‑1 (MQ=255)
                                                                                                                                                                                      ccccGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGc                                                  <  1:595697/150‑1 (MQ=255)
                                                                                                                                                                                       cacggcggATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATg                                                                   <  4:642115/130‑1 (MQ=255)
                                                                                                                                                                                         |                                                                                                                                                                                                  
CTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCAATGGTACGCAGCA  >  NC_000913/3528008‑3528387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.