BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3880655	264 (2.580)	5 (0.050)	5/284	9.1	2.1%	coding (567/1074 nt)	recF	gap repair protein
*	?	NC_000913	= 3880717	229 (2.400)	5 (0.050)	5/284	9.1	2.1%	coding (505/1074 nt)	recF	gap repair protein
Rejected: Position hash score below cutoff.

Only 100 of 244 total aligned reads displayed.

CACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGC  >  NC_000913/3880523‑3880916

cACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATATGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCt                                                                                                                                                                                                    <  2:492095/200‑1 (MQ=255)

          tatTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAgcgc                                                                                                                                                                                          <  2:633835/200‑1 (MQ=255)

                 tctcTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGgcgcgcggagtatagc                                                                                                                                                                                   <  2:199052/200‑13 (MQ=255)

                   tctTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGgcgcgcggagtatagcgc                                                                                                                                                                                 <  2:623283/200‑15 (MQ=255)

                        ctcCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCgctgct                                                                                                                                                                            <  2:219987/200‑1 (MQ=255)

                             aGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGc                                                                                                                                                                       <  2:496977/200‑1 (MQ=255)

                                      ggAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTg                                                                                                                                                              >  2:244073/1‑200 (MQ=255)

                                                 gTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTCTCAGCCATATCGCCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCCCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCTCATTGCGCTGCTTGAGCACTCGCTTGAGATTGCCCCa                                                                                                                                                   >  2:785880/1‑200 (MQ=255)

                                                  tCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCt                                                                                                                                                                                                    <  1:103753/150‑1 (MQ=255)

                                                               aGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGTGATCAGCTCTTTATCCCACGGGCTTAGCTGTTCGTCACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATc                                                                                                                                     <  2:542029/200‑1 (MQ=255)

                                                               aGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATc                                                                                                                                     <  2:689048/200‑1 (MQ=255)

                                                                gggAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGgcgc                                                                                                                                                                                               <  3:257054/141‑1 (MQ=255)

                                                                gggAGAAAGTGCTTACAGGTAGCGGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGGCAGGTGCTGATTTGCTCCGCCAGCGGGATGAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGgcgcgcggagtat                                                                                                                                                                                      <  1:706702/150‑10 (MQ=255)

                                                                      aaTTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTgcgc                                                                                                                                                                                <  1:415254/150‑1 (MQ=255)

                                                                      aaTTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTgcgc                                                                                                                                                                                <  1:283587/150‑1 (MQ=255)

                                                                          gCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCAt                                                                                                                                                                                     >  3:625592/1‑141 (MQ=255)

                                                                          gCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTtg                                                                                                                          >  2:176469/1‑200 (MQ=255)

                                                                              gcAGGTATCGGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAgcgc                                                                                                                                                                                          <  4:723473/131‑1 (MQ=255)

                                                                                 ggTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCaa                                                                                                                                                                     >  1:115128/1‑150 (MQ=255)

                                                                                 ggTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGc                                                                                                                   >  2:740967/1‑200 (MQ=255)

                                                                                  gTATCAGCCATAGCGGCCACGATACCGGCGCTATACTCCGCGCTCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTATCTGTGCGTATCGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTCAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCa                                                                                                                  <  2:404157/200‑1 (MQ=255)

                                                                                   tATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCAt                                                                                                                 >  2:582130/1‑200 (MQ=255)

                                                                                       aGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGAACAGCTCTTTATCCCACGGGCGTCGCTTCTCGTAACGGTTCACCTCGCTCAGCACCGCCTTgcg                                                                                                                                                                                 >  4:334765/1‑132 (MQ=255)

                                                                                        gCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTTGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTg                                                                                                                                                              >  1:550107/1‑150 (MQ=255)

                                                                                        gCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTtcgc                                                                                                                                                                                >  4:632857/1‑132 (MQ=255)

                                                                                        gCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTgcgc                                                                                                                                                                                >  4:505938/1‑132 (MQ=255)

                                                                                        gCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTgcgc                                                                                                                                                                                >  4:162263/1‑132 (MQ=255)

                                                                                        gCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTgcgc                                                                                                                                                                                >  4:111592/1‑132 (MQ=255)

                                                                                        gCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGc                                                                                                                                                                       <  3:437111/141‑1 (MQ=255)

                                                                                        gCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCa                                                                                                            >  2:590485/1‑200 (MQ=255)

                                                                                        gCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGCGCTGATTTGCTCCGCCAGCGGGATCAGCCCTTTATCCCACGGTCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCTTTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTTAAAAATCCGGGTTCGTTGTGAAAGCATCTCCa                                                                                                            >  2:824770/1‑200 (MQ=255)

                                                                                          cATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGt                                                                                                          <  2:93327/200‑1 (MQ=255)

                                                                                            tatCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGAt                                                                                                                                                          <  1:582126/150‑1 (MQ=255)

                                                                                                ggCCTCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTGGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAg                                                                                                                                                                        <  4:446045/132‑1 (MQ=255)

                                                                                                 gCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTc                                                                                                                                                     <  1:252232/150‑1 (MQ=255)

                                                                                                 gCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTGGCTCCGCCAGGGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGc                                                                                                                                                                       <  4:681480/132‑1 (MQ=255)

                                                                                                   cgcgATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTgag                                                                                                                                                            <  3:41021/141‑1 (MQ=255)

                                                                                                     cgATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGAt                                                                                                                                                          <  3:87338/141‑1 (MQ=255)

                                                                                                          ccGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTc                                                                                                                                                     <  3:570936/141‑1 (MQ=255)

                                                                                                          ccGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTc                                                                                                                                                     <  3:640172/141‑1 (MQ=255)

                                                                                                             gcgcTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTgaga                                                                                                                                                           >  4:467281/1‑132 (MQ=255)

                                                                                                             gcgcTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGAt                                                                                                                                                          >  2:416569/1‑133 (MQ=255)

                                                                                                             gcgcTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAg                                                                                                                                                  >  3:649434/1‑141 (MQ=255)

                                                                                                             gcgcTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTa                                                                                       >  2:459081/1‑200 (MQ=255)

                                                                                                             gcgcTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTa                                                                                       >  2:478501/1‑200 (MQ=255)

                                                                                                             gcgcTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTa                                                                                       >  2:523293/1‑200 (MQ=255)

                                                                                                             gcgcTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGACTGCTCCAg                                                                                                                                                  >  3:209453/1‑141 (MQ=255)

                                                                                                              gcaatgcggcgctgcgcCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGAt                                                                                                                                                          >  4:41005/14‑132 (MQ=255)

                                                                                                              cgcTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAgg                                                                                                                                                 >  3:713090/1‑141 (MQ=255)

                                                                                                               gcTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTTTCCCACCGGCGTAGCCGTTCGTAACGTGTCCCCCGGCGCAGCCCCGCCTTGCGCTGCTTGAGCAATCGCTTgcgttc                                                                                                                                                         >  4:123754/1‑127 (MQ=255)

                                                                                                               gcTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGc                                                                                                                                                >  3:23929/1‑141 (MQ=255)

                                                                                                               gcTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGaaaaa                                                                                                                                       >  1:454476/1‑150 (MQ=255)

                                                                                                               gcTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTAtt                                                                                     >  2:564828/1‑200 (MQ=255)

                                                                                                               caatgcggcgctgcgcCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGAt                                                                                                                                                          >  3:508649/13‑131 (MQ=255)

                                                                                                                cTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTAttt                                                                                    <  2:158460/200‑1 (MQ=255)

                                                                                                                 tataCTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATc                                                                                                                                     <  1:583582/150‑1 (MQ=255)

                                                                                                                     cTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCggg                                                                                                                                 <  1:476352/150‑1 (MQ=255)

                                                                                                                            cgcCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCggcg                                                                                                                                            >  4:561130/1‑130 (MQ=255)

                                                                                                                            cgcCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGtt                                                                        >  2:351951/1‑200 (MQ=255)

                                                                                                                            cgcCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGtt                                                                        >  2:190500/1‑200 (MQ=255)

                                                                                                                            cgcCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTCATCCCCCGGGCGTAGCTGTTCGTATCGTTTCACCTGGCGCAGCGCCCCACACCGCTGCTTTAGCAATCGCTCGACATTGCTCCAGGCggcg                                                                                                                                            >  4:314925/1‑130 (MQ=255)

                                                                                                                                     cTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGagtaaagt                                                               <  2:433492/200‑1 (MQ=255)

                                                                                                                                       gATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTtgtg                                                                                                                        >  3:146113/1‑141 (MQ=255)

                                                                                                                                         tgtGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAAGCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGtt                                                                                                                               <  4:528729/130‑1 (MQ=255)

                                                                                                                                             cTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCa                                                                                                                  <  3:160444/141‑1 (MQ=255)

                                                                                                                                              tcggCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCg                                                                                                        <  1:195212/147‑1 (MQ=255)

                                                                                                                                               ctgCCAGCGGGATCTGCTCTGTATCCCACGGGCGTAGCTGTTCGTAACGTGTGACCTGGCGCAGAGCCGCCTTGCGCTGCTTGAGCAATCGCTTGCGGTTGCTGCATGCGGTGAAAAAGCCTGGTTCGTTGTGAAATCATCCCCAGTCGa                                                                                                       >  1:99702/3‑150 (MQ=255)

                                                                                                                                                   cAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGaa                                                                                                   <  1:559288/150‑1 (MQ=255)

                                                                                                                                                   cAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCg                                                 <  2:557324/200‑1 (MQ=255)

                                                                                                                                                   cAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCg                                                 <  2:137547/200‑1 (MQ=255)

                                                                                                                                                            cAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGGGGTGAAAAATCCGGGTTCGTTGTGAAATCATCCCTAGTCGAGGAATGAtcttct                                                                                          >  1:319443/1‑150 (MQ=255)

                                                                                                                                                              gCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCTTTGCGCTGCTTGAGCAATCGCTTGAGACTGCTCCCGGCGGTGAAAAATCCGGGTTCGTTGTGATACCATCCTCAGt                                                                                                          >  4:209040/1‑132 (MQ=255)

                                                                                                                                                              gCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGt                                                                                                          >  4:624109/1‑132 (MQ=255)

                                                                                                                                                                tctTTATCCCACGGGCGTAGCTGTTCGTATCGTGTCACCTGGCGCAGTGCCGCATTGCGCTGCTTGAGCAATCGCTTGAAATTGCTCCAGGCAGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAAGAATGCTCTTCTGTAt                                                                                      <  1:684071/150‑1 (MQ=255)

                                                                                                                                                                tctTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTAt                                                                                      <  1:244055/150‑1 (MQ=255)

                                                                                                                                                                 ctTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGctc                                                                                              <  3:614265/141‑1 (MQ=255)

                                                                                                                                                                    tATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCtcttc                                                                                           <  3:544362/141‑1 (MQ=255)

                                                                                                                                                                     aTCCCACGGGCGTAGCTGTTCGTAGCGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGaa                                                                                                   <  4:384498/132‑1 (MQ=255)

                                                                                                                                                                     aTCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTggg                                                                                 <  1:658424/150‑1 (MQ=255)

                                                                                                                                                                     aTCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTggg                                                                                 <  1:796023/150‑1 (MQ=255)

                                                                                                                                                                     aTCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCa                               <  2:675699/200‑1 (MQ=255)

                                                                                                                                                                     aTCCCACGGGCGTAGCTGTTCGGAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGaa                                                                                                   <  4:572957/132‑1 (MQ=255)

                                                                                                                                                                         cccGGGCGTAGCTGTTCGTAACGGGTCACCTTGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTAt                                                                                      <  3:323602/139‑1 (MQ=255)

                                                                                                                                                                         cACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTAt                                                                                      <  3:283381/141‑1 (MQ=255)

                                                                                                                                                                          aCGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGCGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAgg                          <  2:751173/200‑1 (MQ=255)

                                                                                                                                                                              gCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAgg                                                                                                     <  2:521691/121‑1 (MQ=255)

                                                                                                                                                                              gCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTgcg                      >  2:301635/1‑200 (MQ=255)

                                                                                                                                                                               cGTAGCTGTTCGTAACGTGTCACATGGCGCAGCGCCGCATTGAGCTGCTGGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTg                                                                                         <  4:285925/132‑1 (MQ=255)

                                                                                                                                                                                  ggCTGGTCGTAACGTGGCACCTGGCGGAGCGCAGGATTGCGATGGTTGAGCAATCGCTTGAGATTGCTTCAGGAGGTGACAAAAACGGGTTCGTTGTGACAGCAGCGCGAGTGGAGGAACGCTGTTATGTAt                                                                                      <  4:672965/131‑1 (MQ=255)

                                                                                                                                                                                  aGCTGTTCGTAACGTGTGACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGATCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAATGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGTGCCGCCGTTGagt                                                                    <  1:127558/150‑1 (MQ=255)

                                                                                                                                                                                    cggTTCGGAACGGGTCACCTGGGGCAGCGCCGCATTGAGCTGCTTGAGCAATCGCTTGAGAGTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTAttt                                                                                    <  4:585763/130‑1 (MQ=255)

                                                                                                                                                                                      gTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTgg                                                                                  >  4:733065/1‑132 (MQ=255)

                                                                                                                                                                                       ttCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGagtaaagt                                                               <  1:162052/150‑1 (MQ=255)

                                                                                                                                                                                           tAACGGGTCCCCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGagt                                                                    <  3:359198/141‑1 (MQ=255)

                                                                                                                                                                                            aaCGTGTCCCCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAAcc                                                          <  1:757727/150‑1 (MQ=255)

                                                                                                                                                                                            aaCGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAAcc                                                          <  1:630880/150‑1 (MQ=255)

                                                                                                                                                                                             aCGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGagtaa                                                                  <  3:74191/141‑1 (MQ=255)

                                                                                                                                                                                                tgtCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGagtaaagt                                                               <  3:118287/141‑1 (MQ=255)

                                                                                                                                                                                                  tCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGc  <  2:799898/200‑1 (MQ=255)

                                                                                                                                                                                                  tCACCTGGCGCAGCGCCGCATTGCGATGCTTGAGCAAGCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGc  <  2:707926/200‑1 (MQ=255)

CACCTCAGCATATTCTGTCTCTTTCTCCCAGCCGCGCTGGAAAGAGAAAGTCAGAGAAAACTCAGGGAGAAATTGCTTACAGGTATCAGCCATATCGGCCGCGATACCGGCGCTATACTCCGCGCGCCAGGTGCTGATTTGCTCCGCCAGCGGGATCAGCTCTTTATCCCACGGGCGTAGCTGTTCGTAACGTGTCACCTGGCGCAGCGCCGCATTGCGCTGCTTGAGCAATCGCTTGAGATTGCTCCAGGCGGTGAAAAATCCGGGTTCGTTGTGAAAGCATCCCCAGTCGAGGAATGCTCTTCTGTATTTGGGGCCGCCGTTGAGTAAAGTAAACCCTTCTGGCGTTATCAACTGCATTGGCATCAGGTGCGCCAGTTCCGCGACCTTATGC  >  NC_000913/3880523‑3880916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.