Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	401089	401326	238	41 [38]	[37] 49	ddlA/iraP	D‑alanine‑D‑alanine ligase A/anti‑RssB factor, RpoS stabilzer during Pi starvation; anti‑adapter protein

GCCTATATTTTGTGTGGGTAATTATTTAAATAAGAGAAACGTTTCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGG  >  NC_000913/401214‑401526                                                                                                                  |                                                                                                                                                                                                        gCCTATATTTTGTGTGGGTAATTATTTAAATAAGAGAAACGTTTCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAGATAATACTTCCAGACACTATGAAGTGTTGAAACAt                                                                                                                                                                                       >  4:291198/1‑132 (MQ=255) gCCTATATTTTGTGTGGGTAATTATTTAAATAAGAGAAACGTTTCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATa                                                                                                                                                                     >  1:376510/1‑150 (MQ=255)  ccTATATTTTGTGTGGGTAATTATTTAAATAAGAGAAACGTTTCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTACCTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTACTGAGTTTTTAtt                                                                                                                  >  2:782618/1‑200 (MQ=255)                gggTAATTATTTAAATAAGAGAAACGTTTCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTgg                                                                                                                                                               >  3:21862/1‑141 (MQ=255)                        attTAAATAAGAGAAACGTTTCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGaa                                                                                                                                                                                                   >  2:520155/1‑97 (MQ=255)                        attTAAATAAGAGAAACGTTTCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGaa                                                                                                                                                                                                   <  1:520104/97‑1 (MQ=255)                        attTAAATAAGAGAAACGTTTCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATAc                                                                                                                                                                    <  1:785854/128‑1 (MQ=255)                        attTAAATAAGAGAAACGTTTCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATAc                                                                                                                                                                    >  2:785920/1‑128 (MQ=255)                        attTAAATAAGAGAAACGTTTCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTAAACTtcctgattcttat                                                                                                                                                                >  4:346580/1‑121 (MQ=255)                        attTAAATAAGAAAAACGTTTCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTtc                                                                                                                                                                           <  3:346588/121‑1 (MQ=255)                            aaaTAAGAGAAACGTTTCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGATACATAATGTTAACTTCTCCATACTTTGGATAAGGATAtcc                                                                                                                                                   >  3:268523/1‑139 (MQ=255)                               tAAGAGAAACGTTTCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAgg                                                                                                                                                         >  4:473/1‑132 (MQ=255)                                      aaCGTTTCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGaaa                                                                                                                                         <  3:473/141‑1 (MQ=255)                                          tttCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAAtc                                                                                                                                     >  3:737195/1‑141 (MQ=255)                                                        aaacaaaAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGc                                                            <  2:621874/200‑1 (MQ=255)                                                                    tttGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGCTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTa                                                                                                                    <  4:21862/132‑1 (MQ=255)                                                                       gcgcAAAGTATTTCCTTTGTCATAAGAATAATACATCCAGACACTCTGAAGGTGTGAAACATAATGTTAACTTCTGCATACTTGGGTTGTGGCAATACAGAAATGAAAGATCACATTGATGAGTTGTTATTTAAGCTCGCCCAAAaagac                                                                                               >  1:374859/1‑149 (MQ=255)                                                                       gcgcAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACCTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAaagaa                                                                                               >  1:792240/1‑150 (MQ=255)                                                                       gcgcAAAGTATATCCTTTGACATAAAAATAATGCTTCCAGACACTATGAAGTTGTGAAACATAGTGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACAAGAAAAATCTCATTGCGGAGTTTTTATTGAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTgcgc                                                                      <  2:374901/175‑1 (MQ=255)                                                                              gTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTTCTGAGTTGTTATTTAAGCTTg                                                                                                          >  4:271927/1‑132 (MQ=255)                                                                              gTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGc                                                                                                                              <  1:160219/112‑1 (MQ=255)                                                                              gTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGc                                                                                                                              >  2:160232/1‑112 (MQ=255)                                                                              gTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCt                                                                                                            >  1:168539/1‑130 (MQ=255)                                                                              gTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCt                                                                                                            <  2:168552/130‑1 (MQ=255)                                                                                 tttCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATg                                                                                                                                                                                   >  2:486021/1‑56 (MQ=255)                                                                                 tttCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATg                                                                                                                                                                                   <  1:485970/56‑1 (MQ=255)                                                                                              aaaaaTAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATgg                      <  2:376552/200‑1 (MQ=255)                                                                                                aaaTAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCaa                           >  2:145424/1‑193 (MQ=255)                                                                                                        cTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGa                                                                                 >  1:80528/1‑131 (MQ=255)                                                                                                        cTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGa                                                                                 <  2:80535/131‑1 (MQ=255)                                                                                                          tCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATAc                                                                                                                                                                    <  2:229791/46‑1 (MQ=255)                                                                                                          tCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATAc                                                                                                                                                                    >  1:229775/1‑46 (MQ=255)                                                                                                          tCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATAc                                                                                                                                                   <  2:327665/63‑1 (MQ=255)                                                                                                          tCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATAc                                                                                                                                                   >  1:327637/1‑63 (MQ=255)                                                                                                          tCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGACCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGCAGc                                                            >  1:578611/1‑150 (MQ=255)                                                                                                                cacTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTAtt                                                                                                                  <  1:188257/90‑1 (MQ=255)                                                                                                                cacTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTAtt                                                                                                                  >  2:188271/1‑90 (MQ=255)                                                                                                                  cTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAgttg                                                                                                                       <  1:784343/83‑1 (MQ=255)                                                                                                                  cTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAgttg                                                                                                                       >  2:784409/1‑83 (MQ=255)                                                                                                                  cTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCt                                                                                                            <  1:637702/94‑1 (MQ=255)                                                                                                                  cTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCt                                                                                                            >  2:637757/1‑94 (MQ=255)                                                                                                                  cTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAaagaagaag                                                                                           <  1:61651/111‑1 (MQ=255)                                                                                                                  cTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAaagaagaag                                                                                           >  2:61655/1‑111 (MQ=255)                                                                                                                  cTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTtcgc                                                                      >  4:119924/1‑132 (MQ=255)                                                                                                                  cTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTgcgc                                                                      >  4:600360/1‑132 (MQ=255)                                                                                                                  cTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAg                                                             >  3:280731/1‑141 (MQ=255)                                                                                                                  cTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGgaga                                                    >  1:651223/1‑150 (MQ=255)                                                                                                                  cTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCgg  >  2:286162/1‑200 (MQ=255)                                                                                                                  cTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTGGCCAAAAAAGAAGCAGAGCCGAAAGCACtgtgtcggc                                                                      >  4:124655/1‑128 (MQ=255)                                                                                                                  |                                                                                                                                                                                                        GCCTATATTTTGTGTGGGTAATTATTTAAATAAGAGAAACGTTTCGCTGGTAATCAAACAAAAAATATTTGCGCAAAGTATTTCCTTTGTCATAAAAATAATACTTCCAGACACTATGAAGTTGTGAAACATAATGTTAACTTCTCCATACTTTGGATAAGGAAATACAGACATGAAAAATCTCATTGCTGAGTTGTTATTTAAGCTTGCCCAAAAAGAAGAAGAGTCGAAAGAACTGTGTGCGCAGGTAGAAGCTTTGGAGATTATCGTCACTGCAATGCTTCGCAATATGGCGCAAAATGACCAACAGCGG  >  NC_000913/401214‑401526

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.