Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1212033	1212581	549	45 [37]	[36] 44	iraM/ycgX	RpoS stabilzer during Mg starvation, anti‑RssB factor/DUF1398 family protein

TATGTTAACCGTTATAAAATAACGTATCAAAAGTCAAGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGAAGCATTTCTTAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGT  >  NC_000913/1212499‑1212764                                                                                    |                                                                                                                                                                                       catGTTAACCGTTATAAAATAACGTATCAAAAGTCAAGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGtc                                                                                                                                       <  1:68158/132‑1 (MQ=255) catGTTAACCGTTATAAAATAACGTATCAAAAGTCAAGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGtc                                                                                                                                       >  2:68163/2‑133 (MQ=255)  atGTTAACCGTTATAAAATAACGTATCAAAAGTCAAGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATggg                                                                                                                                                                                >  1:415974/1‑91 (MQ=255)  atGTTAACCGTTATAAAATAACGTATCAAAAGTCAAGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATggg                                                                                                                                                                                <  2:416024/91‑1 (MQ=255)   tGTTAACCGTTATAAAATAACGTATCAAAAGTCAAGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGtct                                                                                                                                      >  4:648606/1‑132 (MQ=255)         ccGTTATAAAATAACGTATCAAAAGTCAAGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGAAGCATTTCTTAAGTATCCAACTTTAGCTAg                                                            >  2:597854/1‑200 (MQ=255)            ttATAAAATAACGTATCAAAAGTCAAGTGATCACATTTCAAATATCACGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGCCAAt                                                                                                                                                                         >  4:546325/1‑88 (MQ=255)            ttATAAAATAACGTATCAAAAGTCAAGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAAt                                                                                                                                                                         <  3:546339/88‑1 (MQ=255)              ataAAATAACGAATCAAAAGTCAAGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGattat                                                                                                                                                                                       >  4:97701/1‑72 (MQ=255)              ataAAATAACGAATCAAAAGTCAAGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGattat                                                                                                                                                                                       <  3:97705/72‑1 (MQ=255)                                             caTTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAatc                                                                                                                                                       <  4:413550/73‑1 (MQ=255)                                             caTTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAatc                                                                                                                                                       >  3:413563/1‑73 (MQ=255)                                               tttCAAATATCAAGTTGATAGTATTAGTCTGGTGattatt                                                                                                                                                                                      <  1:499470/40‑1 (MQ=255)                                               tttCAAATATCAAGTTGATAGTATTAGTCTGGTGattatt                                                                                                                                                                                      >  2:499521/1‑40 (MQ=255)                                                           aGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTg                                                                                                  >  1:181486/1‑112 (MQ=255)                                                           aGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTg                                                                                                  <  2:181499/112‑1 (MQ=255)                                                                   gTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATagag                                                                                                                                             >  4:423049/1‑61 (MQ=255)                                                                   gTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATagag                                                                                                                                             <  1:698389/61‑1 (MQ=255)                                                                   gTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATagag                                                                                                                                             >  2:698448/1‑61 (MQ=255)                                                                   gTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATagag                                                                                                                                             <  3:423061/61‑1 (MQ=255)                                                                   gTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGTTAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGAAGCATTTCTTAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCgt  >  2:506462/1‑200 (MQ=255)                                                                   gTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGa                                                                                          <  1:709747/112‑1 (MQ=255)                                                                   gTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGa                                                                                          <  2:815544/112‑1 (MQ=255)                                                                   gTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGa                                                                                          >  2:709806/1‑112 (MQ=255)                                                                   gTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGa                                                                                          >  1:815475/1‑112 (MQ=255)                                                                   gTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGAAGCATTTCTTAAg                                                                             >  2:717227/1‑125 (MQ=255)                                                                   gTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGAAGCATTTCTTAAg                                                                             <  1:717168/125‑1 (MQ=255)                                                                   gTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGAAGCATTTCTTAAg                                                                             <  3:471281/125‑1 (MQ=255)                                                                   gTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGAAGCATTTCTTAAg                                                                             >  4:471269/1‑125 (MQ=255)                                                                   gTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGAAGCATTTCTTAAGTATCCaa                                                                      >  4:315076/1‑132 (MQ=255)                                                                            tGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGAAGCATTTCTTAAGTATCCAACTTTAGCTAGATTAATgg                                                    <  3:315085/141‑1 (MQ=255)                                                                             ggTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGc                                                                                                               >  4:612818/1‑81 (MQ=255)                                                                             ggTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGc                                                                                                               <  3:612845/81‑1 (MQ=255)                                                                                gATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTcc                                                                                                                      <  1:457751/71‑1 (MQ=255)                                                                                gATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTcc                                                                                                                      >  2:457801/1‑71 (MQ=255)                                                                                   tatttatGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGAAGCATTTCTTAAGTATCCAACTTTAGCTAGATTAATGGTttatta                                             <  3:648634/141‑1 (MQ=255)                                                                                    atttatGGGTGACAATAAAAAGACAGTATTAATCATcc                                                                                                                                                   >  4:380989/1‑38 (MQ=255)                                                                                    atttatGGGTGACAATAAAAAGACAGTATTAATCATcc                                                                                                                                                   <  3:381000/38‑1 (MQ=255)                                                                                    atttatGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCAc                                                                                                                                <  3:647283/57‑1 (MQ=255)                                                                                    atttatGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCAc                                                                                                                                >  4:647255/1‑57 (MQ=255)                                                                                    atttatGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTc                                                                                                                       >  1:234048/1‑66 (MQ=255)                                                                                    atttatGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTc                                                                                                                       <  2:234066/66‑1 (MQ=255)                                                                                    atttatGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGAAGCATTTCTTAAGTATCCAACTTTAGCt                                                              <  1:338967/123‑1 (MQ=255)                                                                                    atttatGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGAAGCATTTCTTAAGTATCCAACTTTAGCt                                                              >  2:338999/1‑123 (MQ=255)                                                                                    |                                                                                                                                                                                       TATGTTAACCGTTATAAAATAACGTATCAAAAGTCAAGTGATCACATTTCAAATATCAAGTTGATAGTATTAGTCTGGTGATTATTTATGGGTGACAATAAAAAGACAGTATTAATCATCCATAGAGATAGTCTCTGCACTTTTATTTCCATTATGCTAATGCCTTACTGAATTATGAAGCATTTCTTAAGTATCCAACTTTAGCTAGATTAATGGTTTATTATTTTCTACATCTTCAATATATAAAAGCGTATTATCAATGGCGT  >  NC_000913/1212499‑1212764

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.