| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1636958 | 1637790 | 833 | 40 [37] | [32] 42 | [ynfO]–gnsB | [ynfO], ydfO, gnsB |
CCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTCCTGAATTATCAATGCAATAGCATCAAATCAACTCAAGAGCCTTATTGCTGCTTCCAGAATTTCT > NC_000913/1637659‑1637990 | cccGTGCGGTATACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATAGGCATCATTTCCTCTTTTAGTCTGTTATGAc < 1:70501/150‑1 (MQ=255) gTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTc < 3:616092/73‑1 (MQ=255) gTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTc > 4:616065/1‑73 (MQ=255) gTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTc > 2:459728/1‑200 (MQ=255) atatTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTc < 1:258719/68‑1 (MQ=255) atatTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTc > 2:258740/1‑68 (MQ=255) atTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACg < 1:248260/114‑1 (MQ=255) atTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACg > 2:248278/1‑114 (MQ=255) atTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCaa > 3:85446/1‑141 (MQ=255) atTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCaa > 3:306490/1‑141 (MQ=255) atTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAagag > 2:383732/1‑186 (MQ=255) ttCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATgg < 3:156743/105‑1 (MQ=255) ttCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATgg > 4:156739/1‑105 (MQ=255) gAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATc > 4:309703/1‑132 (MQ=255) gAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTCCTGAATTATCaa > 2:290525/1‑200 (MQ=255) gAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTCCTGAATTATCaa > 2:465787/1‑200 (MQ=255) atatCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAAc < 3:309712/141‑1 (MQ=255) gcttctgcttTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTatat < 3:534588/90‑1 (MQ=255) gcttctgcttTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTatat > 4:534574/1‑90 (MQ=255) gcttctgcttTTGTTTTTAAGTTTCCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTCCTGAATTATCAATGCAATAGc > 2:759379/1‑200 (MQ=255) ttGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGAt < 4:85442/132‑1 (MQ=255) gTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTACAAGATAAGATGAAACATCGCAATAATCAACATACGATAg > 4:687376/1‑132 (MQ=255) gTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAaagataagat < 4:677911/103‑1 (MQ=255) gTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAaagataagat > 3:677941/1‑103 (MQ=255) tttCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAagag < 1:383685/150‑1 (MQ=255) tttCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAagag > 1:488931/1‑150 (MQ=255) tCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGa > 3:112275/1‑141 (MQ=255) atatTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAAttt > 1:287947/1‑150 (MQ=255) atatTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTCCTGAATTATCAAt < 2:287972/165‑1 (MQ=255) atatTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTCCAAACGTGTAAAAGAGAAGATGAAGCATCGCACTAATCAACATACGATAGTCTAAATTCTAcaca > 4:674899/1‑132 (MQ=255) atTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTc > 1:238786/1‑150 (MQ=255) tcatTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAAt > 3:619090/1‑141 (MQ=255) ctTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGTTAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTCCTGAATTATCAATGCAATAGCATCAAATCAACTCAAGAGCCTTATTGCTGCTTCCAGAATttct > 2:297748/1‑200 (MQ=255) ctTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGCTAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTCCTGaa > 3:342589/1‑141 (MQ=255) ctTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAAt > 4:644200/1‑132 (MQ=255) ctTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTCCTGaa > 3:35173/1‑141 (MQ=255) ctTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTCCTGAAt < 2:342640/142‑1 (MQ=255) ctTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTCCTGAAt > 1:342608/1‑142 (MQ=255) ctTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTCCTGAATTATCAATg > 1:554632/1‑150 (MQ=255) ctTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTCCTGAATTATCAATGCAATAGCatcaaatc < 2:554684/165‑1 (MQ=255) ctTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTCCTGAATTATCAATGCAATAGCATCAAATCAAATCAAGAGCCTTATtgc > 2:811260/1‑184 (MQ=255) ctTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGCAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTCCTGAATTATCAATGCAATAGCATCAAATCAACTCAAGAGCCTTATTGCTGCTTCCAGAATttct > 2:579974/1‑200 (MQ=255) | CCCGTGCGGTAAACTGAATACTGGTAACTTCTTTCCCGGTCTTTTTCTTAAGTTCAATAATTTTTTTTGTTATATATTCAGAAATATCTGCTTCTGCTTTTGTTTTTAAGTTTTCAATATTCATCATTTCCTCTTTTAGTCTGTTATGACTTTCCAGTTACACAGTAAGTCGATTATATGGTGCAAACGTGTAAAAGATAAGATGAAACATCGCAATAATCAACATACGATAGTCTAAATTTTACACAAACAGACAAAGAGAATTTTCCTGAATTATCAATGCAATAGCATCAAATCAACTCAAGAGCCTTATTGCTGCTTCCAGAATTTCT > NC_000913/1637659‑1637990 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |