Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3455293	3455732	440	33 [32]	[32] 33	[gspA]–[gspC]	[gspA], [gspC]

ATAAGAGGGCAGCGACTATCAGTTCGATGAAGCGCATGCAGTAATTGCCCCGCCATCTCATCTCGCGTCCAGGCGCTGTCACGGCAGCCCTGTTCAGCCGCGTTATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTAATCATAAAAATAATGTATGTA  >  NC_000913/3455094‑3455452                                                                                                                                                                                                       |                                                                                                                                                                 ataaGAGGGCAGCGACTATCAGTTCGATGAAGCGCATGCAGTAATTGCCCCGCCATCTCATCTCGCGTCCAGGCGCTGTCACGGCAGCCCTGTTCAGCCGCGTTATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTgcgc                                                                                                                                                                 <  2:204525/200‑1 (MQ=255)            gCGACTATCAGTTCGATGAAGCGCATGCAGTAATTGCCCCGCCATCTCATCTCGCGTCCAGGCGCTGTCACGGCAGCCCTGTTCAGCCGCGTTATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGttt                                                                                                                                                      >  2:200947/1‑200 (MQ=255)                          gATGAAGCGCATGCAGTAATTGCCCCGCCATCTCATCTCGCGTCCAGGCGCTGTCACGGCAGCCCTGTTCAGCCGCGTTATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGcc                                                                                                                                        <  2:714881/200‑1 (MQ=255)                                          tAATTGCCCCGCCATCTCATCTCGCGTCCAGGCGCTGTCACGGCAGCCCTGTTCAGCCGCGTTATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGc                                                                                                                        <  2:761451/200‑1 (MQ=255)                                               gCCCCGCCATCTCATCTCGCGTCCAGGCGCTGTCACGGCAGCCCTGTTCAGCCGCGTTATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGa                                                                                                                   <  2:351593/200‑1 (MQ=255)                                                        tctcatctcGCGTCCAGGCGCTGTCACGGCAGCCCTGTTCAGCCGCGTTATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGAAAAAAATCTTTTTGCAGTAGCTGCGCCAGACAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGtt                                                                                                          <  2:669093/200‑1 (MQ=255)                                                           cgtctcGCGGCCAGGCGCTGTCACGTCAGCCCTGTTCAACCGCGTTATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCAATGTTTATCTTTTTGCAGTTGCTgcg                                                                                                                                                                  <  4:205973/139‑1 (MQ=255)                                                                            cTGTCACGGCAGCCCTGTTCAGCCGCGTTATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGcc                                                                                                                                        <  3:259780/150‑1 (MQ=255)                                                                                 aCGGCAGCCCTGTTCAGCCGCGTTATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACAACCAGGaaa                                                                                 <  2:61368/200‑1 (MQ=255)                                                                                      aGCCCTGTTCAGCCGCGTTATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCcaaca                                                                                                                              <  3:689482/150‑1 (MQ=255)                                                                                         ccTGTTCAGCCGCGTTATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAAt                                                                                                                           <  3:534290/150‑1 (MQ=255)                                                                                          cTGTTCAGCCGCGTTATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTcc                                                                                                                                            <  1:357515/132‑1 (MQ=255)                                                                                            gTTCAGCCGCGTTATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGc                                                                                                                        <  3:680224/150‑1 (MQ=255)                                                                                                   cgcgTGATGGTCGGTATCGTTCCATGCGGCTTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGCTGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACg                                                                                                                 <  3:559576/150‑1 (MQ=255)                                                                                                       ttATCGTCGGTAACGCTCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGa                                                           <  2:589073/200‑1 (MQ=255)                                                                                                       ttATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCAt                                                                                                                      <  4:292750/141‑1 (MQ=255)                                                                                                         aacgtcgGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCcaacaa                                                                                                                             <  1:428429/130‑1 (MQ=255)                                                                                                                   aCGATCCCTGCGGCCTTACCTTGACAGGAAACAACGAGGATTAAAGGAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGa                                                                                                                   <  1:154909/132‑1 (MQ=255)                                                                                                                         cATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTcacac                                                                                           <  3:78544/150‑1 (MQ=255)                                                                                                                                 cTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACg                                                                                                     <  1:93411/132‑1 (MQ=255)                                                                                                                                  ttACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACAACCAGGaa                                                                                  <  3:567767/150‑1 (MQ=255)                                                                                                                                    aCCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACAACCAGGAAAg                                                                                <  3:578832/150‑1 (MQ=255)                                                                                                                                           cAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACAACCAGGaa                                                                                  <  4:74557/141‑1 (MQ=255)                                                                                                                                            aGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTGTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACAACCAGGaaa                                                                                 <  4:323680/141‑1 (MQ=255)                                                                                                                                                  caacGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACAACCAGGAAAGAATAActtctcttc                                                                  <  3:707023/150‑1 (MQ=255)                                                                                                                                                    acGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACAACCAGGaa                                                                                  <  1:219205/132‑1 (MQ=255)                                                                                                                                                        ggCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTAATCATAAAaataa          <  2:49857/200‑1 (MQ=255)                                                                                                                                                          cTTAAAGTAATCACATGGCGATGTTTATCTTTTTGCAGTTGCTGCGGCAGCCAGGTTTTTCCAGTTCCAGCCGCACCCAACAAATAGCATAGACGCCAAGTTTGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGAc                                                          <  3:527594/150‑1 (MQ=255)                                                                                                                                                                gTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTAATCATAAAAATAAtgtatgta  <  2:110671/200‑1 (MQ=255)                                                                                                                                                                 tAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAAc                                                   <  3:200947/150‑1 (MQ=255)                                                                                                                                                                          ggCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAAc                                                   <  4:76788/141‑1 (MQ=255)                                                                                                                                                                                          ttGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATcc                          <  3:165365/150‑1 (MQ=255)                                                                                                                                                                                                ttGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACACCCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTAATc                    <  3:405971/150‑1 (MQ=255)                                                                                                                                                                                                       |                                                                                                                                                                 ATAAGAGGGCAGCGACTATCAGTTCGATGAAGCGCATGCAGTAATTGCCCCGCCATCTCATCTCGCGTCCAGGCGCTGTCACGGCAGCCCTGTTCAGCCGCGTTATCGTCGGTAACGATCCATGCGGCCTTACCTTGCCAGGAAACAACGAGGCTTAAAGTAATCACACGGCGATGTTTATCTTTTTGCAGTTGCTGCGCCAGCCAGGTTTTTCCACTTCCAGCCTCACCCAACAAATAGCATAGACGCCAGGTTTGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTAATCATAAAAATAATGTATGTA  >  NC_000913/3455094‑3455452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.