Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3804156	3805180	1025	35 [27]	[29] 36	waaS–[waaP]	waaS, [waaP]

TTGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAACAATCGTTGACATCATTTTATCTGGACTGAATTTATATAAACTATCATAATCCATTGGTTTAACAGATGAGTTAATAAAATACTCTAACTTATCCCAATCATCATGACCTATTATAAAAAAGCGAGATTC  >  NC_000913/3803956‑3804333                                                                                                                                                                                                        |                                                                                                                                                                                   ttGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTg                                                                                                                                                                                    <  2:153764/200‑1 (MQ=255) ttGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTg                                                                                                                                                                                    <  2:708991/200‑1 (MQ=255)   ggAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAg                                                                                                                                                                                  <  2:148632/200‑1 (MQ=255)         tGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAAc                                                                                                                                                                            <  2:62269/200‑1 (MQ=255)               tGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTg                                                                                                                                                                      >  2:98103/1‑200 (MQ=255)                               tCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTAtt                                                                                                                                                      <  2:239767/200‑1 (MQ=255)                                 cAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTg                                                                                                                                                    <  2:338968/200‑1 (MQ=255)                                                      gTCATTACGACAAAAGAAAAACATTCCACTTTGGTTATGTTGTTGCCTGCAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATACACGCTATTTTCATAGAAACTCTCCTTAATTGAGt                                                                                                                                                                                 >  3:292268/1‑150 (MQ=255)                                                            aCGACAAAAGAAAAACCTTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTg                                                                                                                                                                                    <  4:22078/141‑1 (MQ=255)                                                            aCGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAACAATCGTTGAc                                                                                                                         <  2:503115/200‑1 (MQ=255)                                                                   aaGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTg                                                                                                                                                                                    <  3:493678/134‑1 (MQ=255)                                                                   aaGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTg                                                                                                                                                                                    >  2:493707/1‑134 (MQ=255)                                                                     gAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTg                                                                                                                                                                                    <  1:321359/132‑1 (MQ=255)                                                                       aaaaCATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAACAATCGTTGACATCATTTTATc                                                                                                              <  2:104212/200‑1 (MQ=255)                                                                          aCATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACgg                                                                                                                                                             <  3:630017/150‑1 (MQ=255)                                                                          aCATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACgg                                                                                                                                                             <  3:708328/150‑1 (MQ=255)                                                                           cATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGt                                                                                                                                                            >  3:640995/1‑150 (MQ=255)                                                                            aTTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAACAATCGTTGACATCATTTTATCTGGAc                                                                                                         <  2:430914/200‑1 (MQ=255)                                                                             tttCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAAc                                                                                                                                                                            <  1:153418/132‑1 (MQ=255)                                                                               tCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTc                                                                                                                                                                          <  1:13961/132‑1 (MQ=255)                                                                                  cTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTAttt                                                                                                                                                     <  3:750481/150‑1 (MQ=255)                                                                                   tttGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTg                                                                                                                                                    <  3:98102/150‑1 (MQ=255)                                                                                      ggATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTg                                                                                                                                                                                    >  2:295474/1‑115 (MQ=255)                                                                                      ggATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTg                                                                                                                                                                                    <  3:295467/115‑1 (MQ=255)                                                                                                           tagtaATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAACAATCGTTGACATCATTTTATCTGGACTGAATTTATATAAACTATCATAATCCATTgg                                                                          <  2:641031/200‑1 (MQ=255)                                                                                                                    cATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAACAATCGTTGACATCAtt                                                                                                                   >  3:736587/1‑150 (MQ=255)                                                                                                                      tCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAACAATCGTTGACATCATTTTATCTGGACTGAATTTATATAAACTATCATAATCCATTGGTTTAACAGATg                                                               <  2:736633/200‑1 (MQ=255)                                                                                                                                    ttCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACgg                                                                                                                                                             <  1:336879/92‑1 (MQ=255)                                                                                                                                    ttCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACgg                                                                                                                                                             >  4:336888/1‑92 (MQ=255)                                                                                                                                                  aTCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAACAATCGTTGACATCATTTTATCTGGACTGAATTtatat                                                                                              <  4:282154/141‑1 (MQ=255)                                                                                                                                                       gAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAACAATCGTTGACATCATTTTATCTGGACTGAATTTATATAAACTATCATAATc                                                                                <  3:12579/150‑1 (MQ=255)                                                                                                                                                                                   tCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAACAATCGTTGACATCATTTTATCTGGACTGAATTTATATAAACTATCATAATCCATTGGTTTAACAGATGAGTTAATAAAATACTCTAACTTATCCCAATCATCATGACCTATTATAAAAAAGCGAGATTc  <  2:410269/200‑1 (MQ=255)                                                                                                                                                                                      tAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAAc                                                                                                                                                               >  3:196990/1‑40 (MQ=255)                                                                                                                                                                                      tAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAAc                                                                                                                                                               <  2:196990/40‑1 (MQ=255)                                                                                                                                                                                                   tAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAACAATCGTTGACATCATTTTATCTGGACTGAATTTATATAAACTATCATAATCCATTGGTTTAACAGATGAGTtaataa                                                      <  1:412592/132‑1 (MQ=255)                                                                                                                                                                                                        |                                                                                                                                                                                   TTGGAAAATGAACATGAGTATTTAATACCTTCCAGCCATCCCTTATCCATTTTGTCATTACGACAAAAGAAAAACATTTCACTTTGGATATGTTGTTGCCTGAAGGTAGTAATAACATCACGGATGACAGTTTCCATGCCGCCAAATCCAGAAACAGCTTCGCCGATAAACGCTATTTTCATAGAAACTCTCATTAATTGAGTAAAACTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAACAATCGTTGACATCATTTTATCTGGACTGAATTTATATAAACTATCATAATCCATTGGTTTAACAGATGAGTTAATAAAATACTCTAACTTATCCCAATCATCATGACCTATTATAAAAAAGCGAGATTC  >  NC_000913/3803956‑3804333

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.