Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	954543	954834	292	33 [32]	[32] 33	focA/ycaO	formate channel/ribosomal protein S12 methylthiotransferase accessory factor

ATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGATGTGCAGCAAACGCGTGCAGATCGCTATCTACCGGTTGCAGGCCGTAAAACGCCGCTTCGCCGCTC  >  NC_000913/954780‑955001                                                        |                                                                                                                                                                       aTGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCaacaac                                                                          >  3:535134/1‑150 (MQ=255)    cAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGATGTGCAGCAAACGCGTGCAGATCGCTATCTACCGGTTGCAGGCCGTa                     >  2:342341/1‑200 (MQ=255)        tatatGTAAAGCGGGGCATTAAAAAGACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGattttattt                                                                                                                              <  2:385363/91‑1 (MQ=255)        tatatGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGattttattt                                                                                                                              >  3:385339/1‑91 (MQ=255)        tatatGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAgg                                                                                     >  1:390584/1‑132 (MQ=255)           atGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCATCTTTTCGTAGGCCTTCAACAACg                                                                         >  4:197763/1‑141 (MQ=255)           atGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGAtgtg                                                                >  3:432115/1‑150 (MQ=255)           atGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGAtgtg                                                                >  3:387019/1‑150 (MQ=255)           atGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGATGTGCAGCAAACGCGTGCAGATCGCTATCTACCGGTTGCAGGCCGTAAAAcgcc              >  2:60818/1‑200 (MQ=255)           atGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGATGTGCAGCAAACGCGTGCAGATCGCTATCTACCGGCTGCAGGCCGTAAAAcgcc              >  2:58475/1‑200 (MQ=255)           atGTAAAGCGAGGCATTAAAAAAACGCCCCGTACTATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTCTTTGATTTTATTTTGCCCAGAATACTGCTTTGGCGCGCTGCAGCTTTTCGTCGCCCTTCACCAACGCATGCtgtg                                                                >  3:69/1‑150 (MQ=255)                       gCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGATGTGCAGCAAACGCGTGCAGATCGCTATCTACCGGTTGCAGGCCGTAAAACGCCGCTTCGCCGCTc  >  2:650963/1‑200 (MQ=255)                                         gTAATATAACTCAGACTAATCATTAAGCCTACATTGCGt                                                                                                                                                 >  3:378810/1‑39 (MQ=255)                                         gTAATATAACTCAGACTAATCATTAAGCCTACATTGCGt                                                                                                                                                 <  2:378834/39‑1 (MQ=255)                                         gTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGATGTGCAGCAAACGCGTGCAGATCGCTATCTACCg                                  >  3:475475/1‑150 (MQ=255)                                          tAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTg                                                                                                                                       >  3:109521/1‑48 (MQ=255)                                          tAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTg                                                                                                                                       <  2:109522/48‑1 (MQ=255)                                            atatAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGattttattt                                                                                                                              <  1:284586/55‑1 (MQ=255)                                            atatAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGattttattt                                                                                                                              >  4:284593/1‑55 (MQ=255)                                            atatAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGAtg                                                                  <  3:326813/115‑1 (MQ=255)                                            atatAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGAtg                                                                  >  2:326823/1‑115 (MQ=255)                                            atatAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGATGTGCAGCAAACGCGTGCAGATCGCTAt                                        >  4:349086/1‑141 (MQ=255)                                            atatAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGATGTGCAGCAAACGCGTGCAGATCGCTATCTACCGGtt                               >  3:690286/1‑150 (MQ=255)                                            atatAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGATGTGCAGCAAACGCGTGCAGATCGCTATCTACCGGtt                               >  3:473571/1‑150 (MQ=255)                                            atatAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTACTTTGCCCAGAATGCTGCCTTGGCGCGCTGCAGCTTTTCGTAGGCATTTAACAACGACTGATGTGCAGCAAACGTGTGCa                                                 >  1:112386/1‑132 (MQ=255)                                                aaCTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAAt                                                                                                                    >  1:251184/1‑61 (MQ=255)                                                aaCTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAAt                                                                                                                    <  4:251191/61‑1 (MQ=255)                                                 aCTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGATGTGCAGCAAACGCGTGCAGATCGCTATCTAcc                                   >  4:363644/1‑141 (MQ=255)                                                     aGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGATGTGCAGCAAACGCGTGCAGATCGCTATCTAcc                                   <  3:401715/137‑1 (MQ=255)                                                     aGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGATGTGCAGCAAACGCGTGCAGATCGCTATCTAcc                                   >  2:401739/1‑137 (MQ=255)                                                      gACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAAt                                                                                                                    <  1:72500/55‑1 (MQ=255)                                                      gACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAAt                                                                                                                    >  4:72502/1‑55 (MQ=255)                                                        cTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGATGTGCAGCAAACGCGTGCAGATCGCTATCTa                                     >  1:220013/1‑132 (MQ=255)                                                        |                                                                                                                                                                       ATGCAAATATATGTAAAGCGGGGCATTAAAAAAACGCCCCGTAATATAACTCAGACTAATCATTAAGCCTACATTGCGTAGGCTATTTGATTTTATTTTGCCCAGAATGCTGCTTTGGCGCGCTGCAGCTTTTCGTAGGCCTTCAACAACGACTGATGTGCAGCAAACGCGTGCAGATCGCTATCTACCGGTTGCAGGCCGTAAAACGCCGCTTCGCCGCTC  >  NC_000913/954780‑955001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.