New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2928130 =	25 (0.580)	3 (0.070)	3/590	5.7	10.4%	intergenic (+458/‑99)	ygdH/sdaC	UPF0717 family protein/putative serine transporter
	?	NC_000913	2928192 =	27 (0.640)					intergenic (+520/‑37)	ygdH/sdaC	UPF0717 family protein/putative serine transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

AAGTATTGATTTTTTCAGTTCAACCTACATATATTGCGCGCCCCGGAAGAAGTCAGATGTCGTTTAATGGGCAAATATTGCCCTTAAATTCTCTTTTACTTTTGATTTACAGAGTAAAGCGTTGGGATAATCTATCTTCCAAGTAGATTATTGTATTTGAGATCAAGATCACTGATAGATACATAACTTGTGTGTATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCACGGCAATCGGCGCGGGCGTGCTGTTCCTGCCAATCAACGCCGGTGTTGGCGGTATGATCCCGCTGATCATCATGGCTATCCTTGCGTTCCCGATGACGTTTTTTGCTCACCGCGGCCTGACTCGCTTCGTACTGTCTGGTAAAAACCCGGGCGAAGACATCA  >  NC_000913/2927896‑2928484                                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                                     aaGTATTTGTTTTTTCCATTCAACCCACATATATTGCGCGCACCGGAAGAAGTCAGATGTCGTTTAATGGGCAAATATTGCCCTTAAATTCTCTTTTACTTTTGATTTACAGAGTAAAGCGTTGGGATAATCTATCTTCCAAGTAGATTATTGTATTTGAGATCAAGATCACTGATAGATACATAACTTGTGTGTATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAg                                                                                                                                                                                                                                                                                                  <  2:294790/301‑1 (MQ=255)         aTTTTTTCAGTTCAACCTACATATATTGCGCGCCCCGGAAGAAGTCAGATGTCGTTTAATGGGCAAATATTGCCCTTAAATTCTCTTTTACTTTTGATTTACAGAGTAAAGCGTTGGGATAATCTATCTTCCAAGTAGATTATTGTATTTGAGATCAAGATCACTGATAGATACATAACTTGTGTGTATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAatta                                                                                                                                                                                                                                                                                          >  1:13325/1‑301 (MQ=255)             tttCAGTTCAACCTACATATATTGCGCGCCCCGGAAGAAGTCAGATGTCGTTTAATGGGCAAATATTGCCCTTAAATTCTCTTTTACTTTTGATTTACAGAGTAAAGCGTTGGGATAATCTATCTTCCAAGTAGATTATTGTATTTGAGATCAAGATCACTGATAGATACATAACTTGTGTGTATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTg                                                                                                                                                                                                                                                                                      <  1:20168/301‑1 (MQ=255)                                          cccGGAAGAAGTCAGATGTCGTTTAATGGGCAAATATTGCCCTTAAATTCTCTTTTACTTTTGATTTACAGAGTAAAGCGTTGGGATAATCTATCTTCCAAGTAGATTATTGTATTTGAGATCAAGATCACTGATAGATACATAACTTGTGTGTATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCTATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCCTCAgggaacaaagtttgaaagg                                                                                                                                                                                                                                                         >  2:191618/1‑284 (MQ=255)                                                         aTGTCGTTTAATGGGCAAATATTGCCCTTAAATTCTCTTTTACTTTTGATTTACAGAGTAAAGCGTTGGGATAATCTATCTTCCAAGTAGATTATTGTATTTGAGATCAAGATCACTGATAGATACATAACTTGTGTGTATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGc                                                                                                                                                                                                                                             <  1:192120/298‑1 (MQ=255)                                                                                              ttttACTTTTGATTTACAGAGTAAAGCGTTGGGATAATCTATCTTCCAAGTAGATTATTGTATTTGAGATCAAGATCACTGATAGATACATAACTTGTGTGTATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCTCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACCCTCGTAGTCCCTGGCGCAaga                                                                                                                                                                                                     >  1:352096/1‑301 (MQ=255)                                                                                              ttttACTTTTGATTTACAGAGTAAAGCGTTGGGATAATCTATCTTCCAAGTAGATTATTGTATTTGAGATCAAGATCACTGATAGATACATAACTTGTGTGTATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGAATTCCTCCAGGAGCAATAGATGGAAACGACTCAAACCAGCACGATTCAGTCGAAAGACTCTCGTAGTACCTGGCCCaaaa                                                                                                                                                                                                     >  2:294693/1‑299 (MQ=255)                                                                                                ttACTTTTGATTTACAGAGTAAAGCGTTGGGATAATCTATCTTCCAAGTAGATTATTGTATTTGAGATCAAGATAACTGATAGATACATACCTTGTGTGTATCTTTCCGCTCTCAAATTATTACGGCGGTAAATGATTAAGCCATAGCAGATAGACAGCTTTCATTTTTACGGTCAGGCACCTTCTCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCGGGAGAAATAGATGGAAATGATTCAAATCAGCAGGCTTGCGTCGCAAGAATATAGTCAGGCCAGGCGCAagtca                                                                                                                                                                                                   >  2:404461/1‑301 (MQ=255)                                                                                                                             ggATAAACTATCTTCCAAGTAGATTATTGTATTTGAGATCAAGATCACTGATAGATACATAAATGGTGTGTATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTacg                                                                                                                                                                       <  1:268046/300‑1 (MQ=255)                                                                                                                                   tctatctTCCAAGTAGATTATTGTATTTGAGATCAAGATCACTGATAGATACATAACTTGTGTGTATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTacggcacggc                                                                                                                                                                <  1:191626/301‑1 (MQ=255)                                                                                                                                            cAAGTAGATTATTGTATTTGAGATCAAGATCACTGATAGATACATAACTTGTGTGTATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATTTTGATGCTGGGCCTTTACGGCACGGCCATCcgcg                                                                                                                                                        >  2:280136/1‑300 (MQ=255)                                                                                                                                             aaGTAGATTATTGTATTTGAGATCAAGATCACTGATAGATACATAACTTGTGTGTATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCACGGCAATCGGcgcg                                                                                                                                                      >  1:381525/1‑301 (MQ=255)                                                                                                                                                  gATTATTGTATTTGAGATCAAGATCACTGATAGATACATAACTTGTGTGTATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATCATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTTTCGTAGTGCCTTGTGCAAGACCACCACCTGGTGTACGCTGGGCCTTTCCGGACCGGCAATCGGGCCggggg                                                                                                                                                  >  2:402181/1‑298 (MQ=255)                                                                                                                                                              tGAGATCAAGATCACTGATAGATACATAACTTTTGTGTATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCACGGCAATCGGCGCGGGCGTGCTGTTCCTGcc                                                                                                                                     <  1:294707/301‑1 (MQ=255)                                                                                                                                                              tGAGATCAAGATCAATGATGGATACATAACTTGGTTGTATCTTTCCGCCCTAAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGATGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCACGGCAATCGGCGCGGGCGTGCTGTTCCTGcc                                                                                                                                     <  2:352079/301‑1 (MQ=255)                                                                                                                                                                                                gtgtATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCACGGCAATCGGCGCGGGCGTGCTGTTCCTGCCAATCAACGCCGGTGTTGGCGGTATGATCCCg                                                                                                      >  1:6890/1‑298 (MQ=255)                                                                                                                                                                                                           cGCCCTCAAATTATTACGGCGGTAAATGATTTTACCACCGCCGATGAACAGATGTCATTTTTACGGTCATGCACCTTCCCGGACTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGACGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCACGGCAATCGGCGCGATCGTGCTGTTCCTGCCAATCAACGCCGGTGTTGGCGGTATGATCCCGCTGATCATCATGGc                                                                                        <  1:404481/301‑1 (MQ=255)                                                                                                                                                                                                                 cAAATTATTACGGCGGTAAATGAATAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCACGGCAATCGGCGCGGGCGTGCTGGTCCTGCCAATCAACGCCGCTTTTGGCGGTATGCTCCCCCCGATCATCCGGGCCATcc                                                                                   >  2:201844/1‑300 (MQ=255)                                                                                                                                                                                                                   aaTTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTTCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCATGGCAATCGGCGCGGGCGTGCTGTTCCTGCCAATTAACGCCGGTGTTGGCGGTATGATCCCGCTGATCATCATGGCTATCCTTg                                                                                >  2:46755/1‑301 (MQ=255)                                                                                                                                                                                                                                             ccATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGCCAGACACCATGTGGATGCTGGCCCTTTACGGCACGGCACTCGGTGCGGGCGTGCTGCTCCTGCCAATCAACGCCGGTGTTGGCGGTATGATCCCCCTGCTCATCCTTGCTATCCTTGCGTTCCCGATGACGTTTTTTCCTCa                                                       >  1:101279/1‑300 (MQ=255)                                                                                                                                                                                                                                                             gATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGCCACCATGTGGATGCTGGGCCTTTACTGCACGGCAATCGGCCCGGGCGTGCTGTTCCTGCCAATCAACGCCGTTGTTGGCGGTCTCATCCCGCTTATCACCCTGTCTCTCCTTGCCTTCCCGCTTCCGTTTTTTTCTCCCCTCCGCCTTACTCGc                                       >  2:15446/1‑300 (MQ=255)                                                                                                                                                                                                                                                              aTTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCCCGGCACTCGGCGCGGGCGTGCTGTTCCTGCCAATCAACGCCGGTGTTGGCGGTATGATCCCGCGTATCATCATGGCTATCCTTGCTTTCCCGATTACGTGTTTTGCTCCCCGCGGCCTGTCTCGCtt                                     >  2:327833/1‑301 (MQ=255)                                                                                                                                                                                                                                                               tttCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCACGGCAATCGGCGCGGGCGTGCTGTTCCTGCCAATCAACGCCGGTGTTGGCGGTATGATCCCGCTGATCATCATGGCTATCCTTGCGTTCCCGATGACGTTTTTTGCTCACCGCGGCCTGACTCGCTTc                                    <  1:201852/301‑1 (MQ=255)                                                                                                                                                                                                                                                               tttCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCCCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCACGGCAATCGGCGCGGGCGTGCTGTTCCTGCCCTGCAACGCCGGTGGTCTCGTTCGGATCCCCTTGATCATCATGGCCTTCCTGGCGTTACCTTTCCCTTTTTTTTCCCACcgcctccttcattctct                                     >  2:98559/1‑286 (MQ=255)                                                                                                                                                                                                                                                                ttCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGCGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGCCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCACGGCAATCGGCGCCGGCTTGCTGTTCCTGCTAATCAACGCCGGTGTTGGCGGTATGATCCCGCTGATCATCATGGCTATCCTTGCGTTCCCGTTGACGTTTTTTGTTCACCGCGGCCTGACTCGCTTCg                                   >  1:194847/1‑301 (MQ=255)                                                                                                                                                                                                                                                                ttCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCACGGCAATCGGCGCGGGCGTGCTGTTCCTGCCAATCAACGCCGGGGTTGGCGGTATGATCCCGCTGATCATCAGGGCTCTCCTTGCGTTCCCGATTACGTTTTTTGCCCACCGCGGCCTGACCCGCTTCg                                   >  2:393256/1‑301 (MQ=255)                                                                                                                                                                                                                                                                                         ccgggtgtaaatGGTTAAAAGCTGAATTATTTGCATTACACCAGGAGAAATAGAGGTAAACGACTCAAACAAGCACGATGGGGGCGAAAGACTCTCGTAGTGCCTGGCGAAAGACAGACACCATGTGTATGCTGGGCCTTTACGGCACGGCAATCGGCGCGTGCGTGCTGTTCCTGCCAATCAACGCCGGTGTTGGCGGTATGATCCCGCTGATCATCATGGCTATCCTTGCGTTCCCGATGACGTTTTTTGCTCACCGCGGCCTGACTCGCTTCGTACTGTCTGGTAAAAACCCGGGCGa          <  2:316187/290‑1 (MQ=255)                                                                                                                                                                                                                                                                                                  aCTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCACGGCAATCGGCGCGGGCGTGCTGTTCCTGCCAATCAACGCCGGTGTTGGCGGTATGATCCCGCTGATCATCATGGCTATCCTTGCGTTCCCGATGACGTTTTTTGCTTACCGCGGCCTTACCCGCTTCGTACTGTCGGGTAAAACCACGGGCGAAGACCTCa  >  2:257889/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                                     AAGTATTGATTTTTTCAGTTCAACCTACATATATTGCGCGCCCCGGAAGAAGTCAGATGTCGTTTAATGGGCAAATATTGCCCTTAAATTCTCTTTTACTTTTGATTTACAGAGTAAAGCGTTGGGATAATCTATCTTCCAAGTAGATTATTGTATTTGAGATCAAGATCACTGATAGATACATAACTTGTGTGTATCTTTCCGCCCTCAAATTATTACGGCGGTAAATGATTAAGCCATCGCCGATAGACAGATTTCATTTTTACGGTCAGGCACCTTCCCGGGCTGAACTGGCTAAAAGCTGAATTATTTGCATTCCTCCAGGAGAAATAGATGGAAACGACTCAAACCAGCACGATTGCGTCGAAAGACTCTCGTAGTGCCTGGCGCAAGACAGACACCATGTGGATGCTGGGCCTTTACGGCACGGCAATCGGCGCGGGCGTGCTGTTCCTGCCAATCAACGCCGGTGTTGGCGGTATGATCCCGCTGATCATCATGGCTATCCTTGCGTTCCCGATGACGTTTTTTGCTCACCGCGGCCTGACTCGCTTCGTACTGTCTGGTAAAAACCCGGGCGAAGACATCA  >  NC_000913/2927896‑2928484

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.