| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,843,311 | 0 | C | A | 77.8% | 78.4 / 18.1 | 45 | P314Q (CCG→CAG) | gdhA | glutamate dehydrogenase, NADP‑specific |
| Reads supporting (aligned to +/- strand): ref base C (4/6); new base A (19/16); total (23/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.24e-01 | |||||||||||
TCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGGCCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCC > NC_000913/1843023‑1843606 | tCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGAACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCCGATTACGCCAAAGACTCTGGTCTTGTCTATCTCCAAAGCCAACAGCCGTGGTCT‑CTACAGGTTGTCATCg > 2:300631/1‑300 (MQ=255) gCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGCCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAGGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCtt > 1:15222/1‑301 (MQ=255) aaaTGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTg < 1:386012/300‑1 (MQ=255) aaTGCTAAAACGCCACGGTATGGTTTTTGAAGGGATGCGCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAACCGATGGAATTTGGTGCTCCTGTCATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGCTGAACGCGGATTCACGAAAGAGAAACTGGCACTCCTTATCGAAATCAAAGCCAGCAGCGATCTTCGAGTGGCAGATTACGCCACAGAATTTGGTCTGGTTTTTCTCGAATGCCACCCGAAGCGCTCG‑CTACCGGTTGTTATAGCCGTCCCTTga > 2:301722/1‑300 (MQ=255) cTAAAACGCCACGGTATGGGTTTTGTAGGGATGCGCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATTGAAACAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGCTGATGAAAGTGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGTTTACGCCAAAGTATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTTCGCCa > 1:424096/1‑301 (MQ=255) cTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCa > 1:334702/1‑301 (MQ=255) aaaaCGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTCTGGCTCCGGCAACATCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCAc > 1:127813/1‑300 (MQ=255) cGCCATTGTATGGGGGTTGAATGGTTGCACGTTTCCGTTCATGGCTTCGGCATCGTGGCCCAGTACGCCATGGAAAAATCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCa < 2:225877/299‑1 (MQ=255) ttttGAAGGGATGCGCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGtt > 1:137312/1‑301 (MQ=255) tttccgtttcTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATTGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGc < 1:424007/300‑1 (MQ=255) ttcTGGCTCCGGCTACGTCGCCCAGTAGGCTATCGAAAAAGCTATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAGGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCt < 2:15222/301‑1 (MQ=255) gCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGAGTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGACCTGCCTTGCGCCACCCAGCATGAACTCGATGTTGACGCAGCGAATAAGATTAGCGCTAATGGGGTGaa > 2:130567/1‑301 (MQ=255) cGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAATTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGc > 1:254009/1‑300 (MQ=255) tACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAg > 1:63060/1‑301 (MQ=255) tcagacgtgtgcccttccgatctgATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGa < 1:175208/279‑1 (MQ=255) gATGGAATTTGGGGGCCGTGTGATAAATGCGTAAGAATCCAGCTGCACTGGAATTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGac < 2:253998/300‑1 (MQ=255) aggggaTTTGGTGCTCGTGTGATCACTGCGTCAGATTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAGGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGacc < 1:156340/295‑1 (MQ=255) gATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATAGGCCGaagatcgggagaggggcgggtagg > 2:175201/1‑278 (MQ=255) aaTCACTGGGTCAGGCTCCGGCGGGACTGTAGTAGATGAAAGCGGATTCACGAAAGAGAAACTGGAACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACt < 2:209101/299‑1 (MQ=255) gCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGCGTGGCAGATTACGCCAAAGAATTTGGTCTTGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCCGAATGAACTGGCTGTTGACGCCGAGCCTCAGCTTATCCCTCATGGCGTTACATCCGTCGCCGACGGGACAAATATGCCGACTACCATCGAAGCCACTTACTCGTTCcag > 2:347582/1‑300 (MQ=255) gTCCGACGCCAGCGGAACTGTAGTTGATGAAAGAGTAGTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCCAAGCCAGACGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCcagca < 2:128248/300‑1 (MQ=255) cTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGAAGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGTACACCATCGAAGCGACTGAACTGTTCCAgccggacggg > 1:310798/1‑296 (MQ=255) cccAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCg < 1:239570/300‑1 (MQ=255) tGTAGGTGATGAAAGCGGATTAAGGAAAGAGAAACTGGAACGTTTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCa < 2:137307/301‑1 (MQ=255) gATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTaa > 1:396733/1‑301 (MQ=255) tcagaaaaGGGGAACTGGAACGACTTATCTAAAGCAAAGCCAGCCGAGATGGTCGAGTTGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGc < 2:127809/296‑1 (MQ=255) cACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGTGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATg > 1:223098/1‑299 (MQ=255) cGAAAGAGAACCTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAGTGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCtgg < 1:300646/301‑1 (MQ=255) cGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTGCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTCATGCtgg > 1:26669/1‑301 (MQ=255) aaaaaCTTGCACCTCTTATCAAAAACAAAGCCAAGCGCGATGGTCGAGTGGCAAATTACCCCAAAGAAGTTGATCTGTGCTATCTCGAATGCCAACATCCTTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCACCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGt < 2:310783/299‑1 (MQ=255) aCTGGCACGTCTTATCGAAATCAAAGCCAGCCGAGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCt < 1:254474/301‑1 (MQ=255) cTGGCACGTCTTATCGAAATCAAAGCCAGCCTCTATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAGGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTa < 1:130571/301‑1 (MQ=255) gCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACa < 1:242394/300‑1 (MQ=255) aTCGAAATCAAAGCCAGTCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGGCCTgg > 1:61097/1‑301 (MQ=255) tCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACCGGTTGATATCGCCCTGCCTTGCTCCACCCCGAATGACCTGGATCTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATTCCGACCACCCTCCAAGCGACTGAACTGCTCCAGCACGCAGGCGTACTCTTTGCACCGGGTCAAGCGGCTCATGCTGGTGGCGTCGCTACATCGGGCCttc > 1:370805/1‑298 (MQ=255) ggCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGGCCTGGAAATGGCATAAAACGCTGCGCGCCTGGGCTgg > 1:415500/1‑301 (MQ=255) cAGATTACGCCAAAGAATTTGGTCTGGTCTATCCCGNGGGCCAAAAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTGGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGGCCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGa < 2:63059/300‑1 (MQ=255) ttagtctggtctATCGCGAAGGCCAACAGCCGTGGTCT‑CGACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTAAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACAATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGACGTCGCTACAGCGGGCCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGc < 1:347598/298‑1 (MQ=255) ggtctATCTCGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGGTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACCTCGTGACTGGAACTGGCGCAAAACGCTTCGCGCCTGGGCTGGAAAGCCGAGAAAGTCGACGCACCTTTg > 2:236296/1‑301 (MQ=255) ttatactggagggCCAACGACCGT‑GTCTCCTACAAGTTGATAGCGCCCTGCCTGGGGCCACCCAGGATGAACTGGATGTTTAAGCCGCGCATCAGCTTATCGCTAATGGCGGTAAAGCCGTCGCCGAAGGGGCAAATATGCCAACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGGCCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGca < 2:415480/290‑1 (MQ=255) tgtcactgaatggCCAACACGCGTGGGTG‑CTACCGGTGGTTATGGACCTGCCTGGCGACACCCAGAAGGAACTGGATGTGGAGGCCGGGGAGCAGCTTATCGCTAAGGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACGATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGGCCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGca < 2:370787/290‑1 (MQ=255) cGAAGGCCAACAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGAATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCCTCGACGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACAACGGGCCTGGAAATGGCCCAAAACCCCTCCCGCCTTGGCTGAAAAGCCGGTAAAGTTTCACCACGTTTGcacccact > 2:187532/1‑294 (MQ=255) aaCAGCCGTGGTCT‑CTACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTGATGCTGGTGGCGGCGCTACATCGGGCCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACCCACGTTTGCATCACATCATGcgtgg > 1:218880/1‑297 (MQ=255) ct‑ctACAGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGGCCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATg > 2:124335/1‑300 (MQ=255) cctACCGGTTGGTATCGCCCTGCCCTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGGCCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGcc < 2:26669/300‑1 (MQ=255) | TCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCT‑CTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGGCCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCC > NC_000913/1843023‑1843606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |