New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3201319 =	26 (0.790)	3 (0.090)	3/590	4.1	9.6%	coding (113/621 nt)	ygiM	SH3 domain protein
	?	NC_000913	3201440 =	31 (0.950)					coding (234/621 nt)	ygiM	SH3 domain protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

CGATCTTTTTTGTCAGTAGATAGTATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGCCACTACTATCGTTCCACTTTCCATGACAATAACGACAGCCTGATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAGCCTGCGCTCCCGTGTGCCAGATCTGGAAAATCAGGTCAAAACCCTGACCGATAAACTCACCAATATCGATAACACCTGGAATCAGCGCAC‑CGCAGAAATGCAGCAAAAAGTGGCGCAGAGCGACAGCGTGATCAACGGG  >  NC_000913/3201020‑3201614                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                         ctaTCTTTTTTGTCAGTAGATAGTATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGCCACTACTATCGTTCCACTTTCCATGACAATAACGACAGCCTGATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCAg                                                                                                                                                                                                                                                                                                          <  1:311393/298‑1 (MQ=255)                    aTAGTATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGCCACTACTATCGTTCCACTTTCCATGACAATAACGACAGCCTGATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTa                                                                                                                                                                                                                                                                                        <  1:220354/299‑1 (MQ=255)                       ttATTTTGCGCCAAATTGATATGGAACGGACAAGTTAAGGTGCTTAAGAGTTTGAAGCAGGGGCAATGCCTGACACATATGATGCCGATTGATGTCGAAGGCTTTGTGTAGCGACACTGATGCCACTACTATCCTTCCACTTTCCCTGACAATAACGACATCCTGATGCCAAAATTACGCCTGATCGGATTAACTTTTCTCGCACTTAGCGCGACTGCCGGCTCACACGCTGAAGAACCGCGCTATGTGTCCGACGAACTGAATACCTGGGTCCGCAGCGGTACGGGAGATCATTATCGcc                                                                                                                                                                                                                                                                                   <  2:254209/300‑1 (MQ=255)                         aTTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGTGTAGCGACACTGATGCCACTACTATCGTTCCACTTTCCATGACAATAACGACAGCCTGATGCCAAAAGTACGCCTGATCGGATTAACTTTACTCGCACTTATCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTCTGTTTCCGACGAACTGAATACCTGGGTCCGCAGCGGCCCGGGAGATCATTAttgtct                                                                                                                                                                                                                                                                                  >  1:200922/1‑295 (MQ=255)                                   aaaTTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGCCACTACTATCGTTCCACTTTCCATGACAATAACGACAGCCTGATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCAGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACgg                                                                                                                                                                                                                                                                       >  1:217179/1‑301 (MQ=255)                                         ccATGGAGCGGGCAATTTTACGGGCATAAAAGTTTGAAGCAGTCGCAAGGCCGGACACAGAGTATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACAGATGCCACTCCTATCGTTCCACTTTCCATGACAATAACGACAGCCTGATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACg                                                                                                                                                                                                                                                                 <  2:261779/301‑1 (MQ=255)                                                                             tgctcttcagatctccTGACACAGAGGATTCCGATTGATGTCTAATGCTTTGCGTAGCGACACTGATGCCACTACTATCGTTCCACTTTCCATGACAATAACGACAGCCTGATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTGACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCa                                                                                                                                                                                                                             <  1:45234/287‑1 (MQ=255)                                                                                           ccTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGCCACTACTATCGTTCCACTTTCCATGACAATAACGACAGCCTGATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTGACACGCTGAAGAAACGCGCTATGTTTCCGACGACCTGAATACCTTGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGAGAGGAGGNGACCTTATTAAGAACTGCCGCCaagaacggcctgacg                                                                                                                                                                                                               >  2:45231/1‑288 (MQ=255)                                                                                           ccTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGCCACTACTATCGTTCCACTTTCCATGACAATAACGACAGCCTGATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCGGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTCTTACAAAATAACGCCAACACCACTTATGc                                                                                                                                                                                                                >  2:15328/1‑300 (MQ=255)                                                                                                       gATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGCCACTACTATCGTTCCACTTTCCATGACAATAACGACAGCCTGATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAg                                                                                                                                                                                                     <  1:80832/299‑1 (MQ=255)                                                                                                                    tccgatctcTTTGCGTAGCGACACTGATGCCACTACTATCGTTCCACTTTCCATGACAATAACGACAGCCTGATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTa                                                                                                                                                                                      <  1:295504/293‑1 (MQ=255)                                                                                                                            cTTTGCGTAGCGACACTGATGCCACTACTACCGTTCCACTTTCCATGACAATAACGACAGCCTGATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCAGGGTTAACGCCGGCGAGGAAGTGACCTTAATACAAACTGACGCCAACACCAATTATGCCAAGGTGaaagaaagtgatggcagaaagctagga                                                                                                                                                                              >  2:295492/1‑282 (MQ=255)                                                                                                                              ttGCGTAGCGACACTGATGCCACTACTATCGTTCCACTTTCCATGACAATAACGACAGCCTGATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAAAACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGaa                                                                                                                                                                            >  1:160495/1‑300 (MQ=255)                                                                                                                                                              tCCACTTTCCATGACAATAACGACAGCCTGATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAGcc                                                                                                                                            <  1:37942/301‑1 (MQ=255)                                                                                                                                                                                         cTGATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAGCCTGCGCTCCCGGGCGCCAGATCTGGcaa                                                                                                                 >  1:234703/1‑301 (MQ=255)                                                                                                                                                                                                               tCGGATTAACTTTACTCGCACATAGCGCGACTGCCGTCTCACAAGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCGGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAGCCTGCGCTCCCGTGTGCCAGATCTGGAAAATCAGGTCAAAACCCTGACCGa                                                                                           <  2:217169/301‑1 (MQ=255)                                                                                                                                                                                                                         tttACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCGGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAGCCTGCGCTCCCGTGTGCCAGATCTGGAAAATCAGGTCAAAACCCTGACCGATAAACTCAcc                                                                                 <  1:15329/301‑1 (MQ=255)                                                                                                                                                                                                                                                      cacaCGCTGAAGAAACGCGCTATGTTTCCGACGAACGGAATACCTGGGTCCGCAGCGGCCCGGGAGATCATTATCGCCTCGTGGGCATGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGACCAGGCGAAAGACAGCTCTGGCCGTACCGCCTTGACCCCGTTGAAACAACTTACGACTGAGCCAAGCCTGCGCCCCCGTGTGCCAGATCTGAAACATTACGTCAAAACCATGAACGACAAACTCACCAAACTCGATAacaaagcaaagcagcaca                                                     >  2:87887/1‑285 (MQ=255)                                                                                                                                                                                                                                                             tGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAGCCTGCGCTCCCGTGTGCCAGCTCTGGAAAATCAGGTCAAAACCCTGACCGATAAACTCAACAAGATCGATAACACCTGGAATCAGCGCAC‑CGCaaaa                                            >  2:114644/1‑301 (MQ=255)                                                                                                                                                                                                                                                                  aaaCGCGCTATGTTGCCGGCCAACTGGAGACCTGGGTCCGTGGCGGTCCGGGAGATCATTATCGCCCCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAGCCTGCGCTCCCGTGTGCCAGATCTGGAAAATCAGGTCAAAACCCTGACCGATAAACTCACCAATATCGATAACACCTGGAATCAGCGCAC‑CGCAGAAATgca                                       <  2:160485/301‑1 (MQ=255)                                                                                                                                                                                                                                                                                         cTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAGCCTGCGCTCCCGTGTGCCAGATCTGGAAAATCAGGTCAAAACCCTGACCGATAAACTCACCAATATCGATAACACCTGGAATCAGCGCAC‑CGCAGAAATGCAGCAAAAAGTGGCGCAGAGCGACa                >  1:306448/1‑301 (MQ=255)                                                                                                                                                                                                                                                                                         cTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAACCTGCGCTCCCGTGTGCCAGATCTGGAAAATCAGGTCAAAACCCTGACCGAAAAAACCACCAATATCGATAACACCCGGAATCAGCGCAA‑CGAAAAAATGCAGCAAAAAGTGCCGCAGAGCGaaa                >  2:85795/1‑299 (MQ=255)                                                                                                                                                                                                                                                                                               aCCTGGGTACGCAGCGGTCCGGGAGATACTTATCGCCTCGTGGGAACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAGCCTGCGCTCCCGTGTGCCAGATCTGGAAAATCAGGTCAAAACCCTGACCGATAAACTCACCAATATCGATAACACCTGGAATCAGCGCAC‑CGCAGAAATGCAGCAAAAAGTGGCGCAGAGCGACAGCGTGa          <  1:277534/301‑1 (MQ=255)                                                                                                                                                                                                                                                                                                ccTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAGCCTGCGCTCTCGTGTGCCAGACCTGGAAAATCAGGTCAAAACCCTGACGGATAAACCCACCAATCTCGATAACACCTGGACTCAGC‑CACACGCCNAAACGCACCAAAAAGTGGCGCAGAGCGACAGCGCGaa         >  2:48741/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                ccTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAGCCTGCGCTCCCGTGTGCCAGATCTGGAAAATCAGGTCAAAACCCTGACCGATAAACTCACCAATATCGATAACACCTGGAATCAGCGCAC‑CGCAGAAATGCAGCAAAAAGTGGCGCAGAGCGACAGCGTGaa         >  1:41982/1‑300 (MQ=255)                                                                                                                                                                                                                                                                                                       ccGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAGCCTGCGCTCCCGTGTGCCAGATCTGGAAAATCAGGTCAAAACCCTGACCGATAAACTCACCAATATCGATAACACCTGGAATCAGCGCAC‑CGCAGAAATGCAGCAAAAAGTGGCGCAGAGCGACAGCGTGATCAACggg  <  1:85801/301‑1 (MQ=255)                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                         CGATCTTTTTTGTCAGTAGATAGTATTTTGCGCCAAATTGCCATGCAACGGGCAATTTGACGGGCGTAAAAGTTTGAAGCAGTGGCAAGACCTGACACAGAGGATTCCGATTGATGTCGAATGCTTTGCGTAGCGACACTGATGCCACTACTATCGTTCCACTTTCCATGACAATAACGACAGCCTGATGCCAAAATTACGCCTGATCGGATTAACTTTACTCGCACTTAGCGCGACTGCCGTCTCACACGCTGAAGAAACGCGCTATGTTTCCGACGAACTGAATACCTGGGTCCGCAGCGGTCCGGGAGATCATTATCGCCTCGTGGGCACGGTTAACGCCGGCGAGGAAGTGACCTTATTACAAACTGACGCCAACACCAATTATGCCCAGGTGAAAGACAGCTCTGGCCGTACCGCCTGGATCCCGTTGAAACAACTTAGCACTGAGCCAAGCCTGCGCTCCCGTGTGCCAGATCTGGAAAATCAGGTCAAAACCCTGACCGATAAACTCACCAATATCGATAACACCTGGAATCAGCGCAC‑CGCAGAAATGCAGCAAAAAGTGGCGCAGAGCGACAGCGTGATCAACGGG  >  NC_000913/3201020‑3201614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.