New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1207790 =	0 (0.000)	24 (0.750)	24/568	0.3	92.3%	coding (290/630 nt)	stfP	e14 prophage; uncharacterized protein
	?	NC_000913	1209619 =	4 (0.120)					pseudogene (1/501 nt)	stfE	pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

ATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGTGCGCAGCT  >  NC_000913/1207497‑1208085                                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                        aTCCATGCATCGATTAGAAACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTG                                                                                                                                                                                                                                                                                                  <  2:9136‑M1/301‑1 (MQ=255)                  acacGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGGGAAGGctctgcatt                                                                                                                                                                                                                                                                                 >  1:71300‑M1/1‑292 (MQ=255)                               gcAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgg                                                                                                                                                                                                                                                                     >  2:50925‑M1/1‑279 (MQ=255)                                          aGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg                                                                                                                                                                                                                                                         >  2:122313‑M1/1‑268 (MQ=255)                                            ttCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtgg                                                                                                                                                                                                                                                        <  2:71302‑M1/300‑35 (MQ=255)                                            aaggtcgcggttaaCAACGGGTTTACCCGTGGTAACCCCCAGACCGGCACGCCGGCCACCGATCTGGATGATGACTACTGTGACATGTTGCAGGAGGAACGTTGCAGCGTGATGGAGGCATCCGATGCCAGCCTGGGGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggc                                                                                                                                                                                                                                                       <  1:120803‑M1/296‑36 (MQ=255)                                               agacaaccagagtgtcacctgccgataatgtcctgagcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataatcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGc                                                                                                                                                                                                                                                     <  1:28996‑M1/53‑1 (MQ=255)                                                 cgcgGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcagtt                                                                                                                                                                                                                                                   >  2:120806‑M1/1‑261 (MQ=255)                                                   aaccagagtgtcacctgccgataatgtcctgagcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATTCAGCAACGGCTACATTAGGTCGCACCgg                                                                                                                                                                                                                                                <  1:73238‑M1/58‑1 (MQ=255)                                                         aGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGCGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCTGTTTGGCGATATTAAATCGGATGGCACTGCGCAAACGTCTCTCGAAAACCATGGTTTGGGAGAAGGctctgcattacctgtgggtgtcccggttccggggccttccgccactc                                                                                                                                                                                                                                           >  2:66825‑M1/1‑253 (MQ=255)                                                           tgtcacctgccgataatgtcctgagcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                                                                                                                                                                                        >  2:7252‑M1/236‑301 (MQ=255)                                                             ttgccttccagtaatgtcctgagcagttttttcaggcccggccattcggactttgggccgcttaacttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                                                                                                                                                                                                                       >  1:153952‑M1/234‑300 (MQ=255)                                                                  taacccaggttaacccccagaCCGGACAGCCGGCCACCCATCTGAATGATGACTACTTTGACATGTTGCAGGGGGAACTTTGCGGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacagg                                                                                                                                                                                                                                 <  1:122310‑M1/291‑58 (MQ=255)                                                                   gccgataatgtcctgagcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCACCGGCTACATTAGGAAGCACCGGTTTCatagcttaacc                                                                                                                                                                                                                                 <  1:285928‑M1/73‑6 (MQ=255)                                                                            aaaaccccagacCGGCAGGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaa                                                                                                                                                                                                                       <  1:151058‑M1/297‑68 (MQ=255)                                                                             tcctgagcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                                                                                                                                                                                      >  2:285936‑M1/218‑301 (MQ=255)                                                                                   gcagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttggtatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCATTGCAGCACCGGCTACATTATGCCGCAACGGTTTCATAGCTATCCCGGTTATGATttgtggtt                                                                                                                                                                                                                <  1:221163‑M1/90‑2 (MQ=255)                                                                                    cagttttttcagtcccggcctttcggactttgtgccgcttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGCGAAGGAGCAAAACTCAATGCAGCAACGGCTCAATTAGGACGCCCCGGTTTCATAGCAATGACGTTTATGAttggtggttt                                                                                                                                                                                                               <  1:276938‑M1/91‑3 (MQ=255)                                                                                               ccTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTTCAAACGGCTCTCGAAAACCTTGGTTTTGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggccggcggaaatgcaagggttccccttttt                                                                                                                                                                                                    >  1:170845‑M1/1‑215 (MQ=255)                                                                                                    cACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctg                                                                                                                                                                                                 >  2:193766‑M1/1‑210 (MQ=255)                                                                                                            tGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagatt                                                                                                                                                                                        >  1:188075‑M1/1‑202 (MQ=255)                                                                                                              gatatggacacatttggcaggttgcagGAGGAACGTTGCGACGTGGTGGAGACATCCGGTGCCAGGCGGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGTCGCAAGAGTCCGTTTGGCGATAGCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatac                                                                                                                                                                                      <  1:271045‑M1/288‑101 (MQ=255)                                                                                                                tttgtgtcgtttatcttgtcttcaaaaatcagctcgcatcctgcacagttcagcgcattacgttggagatctgtattctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggggg                                                                                                                                                                                   >  2:28997‑M1/183‑301 (MQ=255)                                                                                                                         ctTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGGTTGGGAGAAGGctctgcatgacctgttggtgtcccggttccggttccttaagccactccgccaacaggcgtgatcaaagcaaatggtgccgctttttctgctgaagaatacccggatctggca                                                                                                                                                                          >  1:169940‑M1/1‑189 (MQ=255)                                                                                                                             gACAGGATGCAGGAGGAACGTTGCAGCGTGGTGGAGGCATCCGGTGCAAGCATGGAGAAGGGGCGGCACGACCAGTTACTTACCGAACTTCGAGCGATGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaag                                                                                                                                                                       <  1:319264‑M1/300‑116 (MQ=255)                                                                                                                                        ggaggaACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgac                                                                                                                                                            <  2:188081‑M1/300‑127 (MQ=255)                                                                                                                                                  cgcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGACTCTggggggg                                                                                                                                                 <  2:92253‑M1/153‑1 (MQ=255)                                                                                                                                                           cacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGACGAAAAAGCATCTGCCTCTGGGGGGGAtggaatta                                                                                                                                        <  1:19204‑M1/162‑4 (MQ=255)                                                                                                                                                             ggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCCGTTCAGCCGCAAGAACCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTATCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtactgggtccgtggccctaagccactccgccaacagcctggctgaaatgcaatggcgccgatgcttcggctgaagcatactcggtatgggaaaaggctgatcggaccaataattggcgtgttttacgt                                                                                                                                      >  1:75115‑M1/1‑153 (MQ=255)                                                                                                                                                                  cATCCGGTGCCGGCCTGGGGAGGGGGGGGCACGACCAGTGCCATACCGAACTTCGAACGCGAGTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACGGTGCAAACGGCTCTCGAAAACCTTGGGTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtg                                                                                                                                  <  1:89972‑M1/300‑153 (MQ=255)                                                                                                                                                                        gggccAGCCTGAAGAAGGACCGCCACGACCAGGTACTTGCCGAACTTCGCGAGCTGCTGTTACACCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagttta                                                                                                                            <  1:50923‑M1/298‑159 (MQ=255)                                                                                                                                                                        gTGCCAGCCTGGAGAAGTGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttat                                                                                                                           >  2:180380‑M1/1‑142 (MQ=255)                                                                                                                                                                           ccAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgactgatttacgtggtgagtttattcg                                                                                                                        >  2:154551‑M1/1‑139 (MQ=255)                                                                                                                                                                           acgttttagatctgtgttctggtcatttgatgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGt                                                                                                                        >  2:276946‑M1/124‑301 (MQ=255)                                                                                                                                                                                   gagaAGGGGCGGCACGACCGGTTACTTACCGCGCTTCGAGCGCTGCTGTTAAGCCGCCAGAATCCGTTTGGGGATATCAAATCGGAGAGCACTGTACAAACGGCTCTCGAAAGCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacgggctggctggaatgcaatagtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaatgaagtgcctgatttacgtggtgagtttattcgtggctgg                                                                                                                 <  2:75117‑M1/300‑170 (MQ=255)                                                                                                                                                                                       acgtgttctcttccgatctgatacgcggacatagccaataagcatggtaaaaccccctagtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTtaat                                                                                                              >  2:208599‑M1/112‑299 (MQ=255)                                                                                                                                                                                          ggcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGATTGGGAGCAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaacgcactggtgccgctttttctgctgaagactacccggaactggcaaaggcttatccgacaaataaattgcctgattcacgtggtgagtttattcgtggctgggatgacgg                                                                                                         >  2:79359‑M1/1‑124 (MQ=255)                                                                                                                                                                                                          gatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGAGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGttgtattcccggtggcgtttaataaatcggaagggtgtggttgg                                                                                         <  1:208593‑M1/209‑20 (MQ=255)                                                                                                                                                                                                          acttgcCGCACGTCGCGGGCTGCTATAGGGTCAAAAGAATCCGTTTAGCAATAGCAAATCGGATGACACTGTGCAGACGGCTCTCGAAAACCTTGGTTTGGGAGCAGGctctgcattacctgttggtgtcccagttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccactttttctgctgaagaatacccggaactggcaaaggcttatccgacagatgaattgcctgatttacgtagtgagtttattcgtggctgggatgacgggcgggggattgataca                                                                                         <  1:66823‑M1/301‑194 (MQ=255)                                                                                                                                                                                                           ataagcttacataagcaataagcatgtgtaatccccctgtgaaaaggagaagtaatgccatttgcttgttatttcttcaatttcataaacgTTGGTTTGGGAGAAGGAGCAAAACGCCATGCAGCAACGGCTACAGTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGGATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGttgttg                                                                                        >  1:226445‑M1/92‑301 (MQ=255)                                                                                                                                                                                                              cgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTTCaa                                                                                     <  2:115624‑M1/213‑1 (MQ=255)                                                                                                                                                                                                                      tagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGTGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGAc                                                                             >  2:221171‑M1/81‑301 (MQ=255)                                                                                                                                                                                                                           cactgctgttAAGCCGCAAGAGTCCGTTTGGCGATAGCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGTGAGAGGGctctgcagtacctgttggtgtcccggttccggggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaag                                                                        <  1:79357‑M1/299‑211 (MQ=255)                                                                                                                                                                                                                            tccgatcttaagccgcAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagt                                                                       <  2:145608‑M1/294‑212 (MQ=255)                                                                                                                                                                                                                                    tAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgttgctgggttgacgggcgggggattcatacaggtctctctattttaagtagataggg                                                               >  1:145605‑M1/1‑82 (MQ=255)                                                                                                                                                                                                                                       gCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgattttcttcggggctgggatgacgggcgggggngtgatacaggtcgctctattttaagtattcaggggtg                                                            >  1:44454‑M1/1‑79 (MQ=255)                                                                                                                                                                                                                                                   taaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGc                                                >  2:19205‑M1/52‑301 (MQ=255)                                                                                                                                                                                                                                                        gcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTCTGACAATGTCAGCGCCCCTATCAATGCAGTGGCAACgg                                           <  2:262376‑M1/255‑1 (MQ=255)                                                                                                                                                                                                                                                             aataatgccatttgcttgttattgcttcattttcataaactGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGTCTACATTAGAGCTCAGCGGTTTAATAGCTATACCGGTTATGATTGGTGGTATTGAACAATCAGTAATCATTCAGTGGGGGTGGAATGCCGAAAAAGCATCTGCCTCTGGGGGGAGTGGTAATACAATTGTATTCCCGGTTGCGTTTAATAATGAATGTGGTGCCGTAGTTGCAAATTATGACAATGACAGAGCACCTATCAATGCAGTGGCAACGGGGGGa                                      >  2:125497‑M1/42‑301 (MQ=255)                                                                                                                                                                                                                                                                 atgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAAATCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGatat                                   >  2:73240‑M1/38‑300 (MQ=255)                                                                                                                                                                                                                                                                   aTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgcgtttattcgtggctgggattacgggcgggggattgatacaggtcgccctattttaagtattcaggggtttgcaagggaggatcttgcgcatggattt                                >  1:239019‑M1/1‑51 (MQ=255)                                                                                                                                                                                                                                                                       gATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcaggggtatgcaacggaggatcatgctcatggcttaccgt                            >  2:22807‑M1/1‑47 (MQ=255)                                                                                                                                                                                                                                                                              tttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTAAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATTACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGtt                     >  1:115621‑M1/25‑301 (MQ=255)                                                                                                                                                                                                                                                                               ttatttgttcattttcataaacgTTGGGTTGGGTGGAGGAGCAAAACTCAAAGGAGGAACGGCTACCATAGGACGGAACTGTTTCATAGCTATACCGGTTATGATTGGTGGTAGTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGttt                    >  1:92250‑M1/24‑301 (MQ=255)                                                                                                                                                                                                                                                                                         ccgctcttaaaccttggttTGGGAGAATGctctgcattaccggtgtgtgtcccgggtcagtggccttcaggcactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcaggggtatgcaacgggggatcatgctcatggattaccgtcaagatccacgattgtga          <  1:154548‑M1/293‑273 (MQ=255)                                                                                                                                                                                                                                                                                               ataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCCACGGCTACATTAGGACGCACCGGTTTCACAGCTATACCGGTTATGACTGGCGGTATTGAGCAATCTGTAATCATTCAGTGGGGGTGGAATGTCGCAAAAGCACCCGCCTCTGGGGGGGATGGAAATACCGTTGTATTCCTGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAACTTATGACAATGTCAGCTCACCTATGAATGCAGTGGCAACGGGGGGATATCCAACCAATTCGTTTGTattactgtgtgtag    <  1:304669‑M1/294‑6 (MQ=255)                                                                                                                                                                                                                                                                                                 aaaCCTTGGTTTGAGAGAAGGctctgcattaccggttggggtcccggtcccgtggcctacagccactccgccaacaggctggctgaaatgcaatggtgacgctttttctgctgaagaatacccggagctggcaaaggcttatccgacaaataaattgcctgatttacgtggtgagtttattcgtggctgggatgacgggcgggggattgatacaggtcgctctattttaagtattcaggggtatgcaacggaggatcatgctcatggattaccgtcaagatccacgattgtgactgatgca  <  2:204937‑M1/301‑281 (MQ=255)                                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                        ATCCATGCATCGTATAGACACGAAAACCGCGCAGAAGGATAAGTTCGGCGCGGGTAAGAACGGTTTTACCCGTGGTAACCCCCAGACCGGCACGCCTGCCACCGATCTGGATGATGACTACTTTGACATGTTGCAGGAGGAACTTTGCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGTTGTATTCCCGGTTGCGTTTAATAATGCCTGTGTTGCCGTTGTTGCAAATTATGACAATGTCAGCGCACCTATCAATGCAGTGGCAACGGGGGGATATACAACCACTTCGTTTTTATTACGGTGCGCAGCT  >  NC_000913/1207497‑1208085

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.