mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.27.1 revision 87c22d663cc3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2987089 = | 27 (0.800) | 3 (0.090) | 3/572 | 4.1 | 10.6% | intergenic (+13/‑447) | yqeG/yqeH | putative transporter/putative LuxR family transcriptional regulator |
| ? | NC_000913 | 2987120 = | 25 (0.770) | intergenic (+44/‑416) | yqeG/yqeH | putative transporter/putative LuxR family transcriptional regulator | |||||
| * | ? | NC_000913 | 4422633 = | 25 (0.740) | 3 (0.090) | 3/586 | 4.2 | 9.9% | coding (448/651 nt) | ulaD | 3‑keto‑L‑gulonate 6‑phosphate decarboxylase |
| ? | NC_000913 | 4422782 = | 30 (0.910) | coding (597/651 nt) | ulaD | 3‑keto‑L‑gulonate 6‑phosphate decarboxylase | |||||
| * | ? | NC_000913 | 2066607 = | 48 (1.420) | 4 (0.120) | 3/586 | 4.2 | 7.9% | noncoding (747/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2102148 = | NA (NA) | noncoding (796/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 362143 = | 39 (1.150) | 3 (0.090) | 3/582 | 4.2 | 8.1% | coding (1037/1254 nt) | lacY | lactose permease |
| ? | NC_000913 | 362317 = | 30 (0.910) | coding (863/1254 nt) | lacY | lactose permease | |||||
| * | ? | NC_000913 | 193444 = | 49 (1.450) | 3 (0.090) | 3/580 | 4.2 | 6.2% | intergenic (+15/‑77) | frr/dxr | ribosome recycling factor/1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase |
| ? | NC_000913 | 193489 = | 43 (1.310) | intergenic (+60/‑32) | frr/dxr | ribosome recycling factor/1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase | |||||
| * | ? | NC_000913 | = 3085852 | 61 (1.800) | 3 (0.090) | 3/600 | 4.3 | 5.9% | coding (60/1977 nt) | speA | biosynthetic arginine decarboxylase, PLP‑binding |
| ? | NC_000913 | = 3974354 | 35 (1.030) | coding (747/882 nt) | rffH | glucose‑1‑phosphate thymidylyltransferase | |||||
| * | ? | NC_000913 | 1096978 = | 27 (0.800) | 5 (0.150) +G |
3/598 | 4.3 | 15.9% | intergenic (+149/+587) | ycdU/serX | putative inner membrane protein/tRNA‑Ser |
| ? | NC_000913 | = 1097519 | 26 (0.770) | intergenic (+690/+46) | ycdU/serX | putative inner membrane protein/tRNA‑Ser | |||||