New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2704871 =	143 (1.140)	3 (0.030)	3/284	12.7	2.1%	coding (439/975 nt)	lepB	leader peptidase (signal peptidase I)
	?	NC_000913	2704888 =	150 (1.260)					coding (422/975 nt)	lepB	leader peptidase (signal peptidase I)
Rejected: Position hash score below cutoff.

TTCCAGATCCCGTCAGGTTCGATGATGCCGACTCTGTTAATTGGTGATTTTATTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACATCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2705057‑2704871 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaagcTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAATTAACAGAGTCGGCATCATCGAACCTGACGGGATCTGGAACGGTTCATAAATAAACGAACGCACAATC  >  NC_000913/2704888‑2705085                                                                                                                                                                                                                                                                                                                                                                                                   TTCCAGATCCCGTCAGGTTCGATGATGCCGACTCTGTTAATTGGTGATTTTATTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACAT                                                                                                                                                                                                             <  4:949641/182‑1                                CTCTGTTAATTGGTGATTTTATTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACAT                                                                                                                                                                                                             >  4:861613/1‑151                                 TCTGTTAATTGGTGATTTTATTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACAT                                                                                                                                                                                                             <  2:861544/150‑1                                 TCTGTTAATTGGTGATTTTATTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACAT                                                                                                                                                                                                             <  2:85786/150‑1                                  CTGTTAATTGGTGATTTTATTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGCTTACATC                                                                                                                                                                                                            >  2:77609/1‑150                                    GTTAATTGGTGATTTTATTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATCTCGTGGTCTTTAAATATCCGGAAGCTCCAAAGCTTGATTACATCAA                                                                                                                                                                                                          >  2:867588/1‑150                                      TAATTGGTGATTTTATTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATACAAAGCTTGATTACATCAAGC                                                                                                                                                                                                        >  2:834936/1‑150                                          TGGTGATTTTATTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACAT                                                                                                                                                                                                             <  3:212221/141‑1                                          TGGTGATTTTATTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACAT                                                                                                                                                                                                             <  3:180228/141‑1                                                   TATTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACAT                                                                                                                                                                                                             <  1:764185/132‑1                                                    ATTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACATC                                                                                                                                                                                                            <  1:489791/132‑1                                                     TTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACATCA                                                                                                                                                                                                           >  1:709706/1‑132                                                        TGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACATCAAGCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCG                                                                                                                                                                 <  4:990133/171‑1                                                        TGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACATCAAGCTTTGGATATTCCGGATAT                                                                                                                                                                                      >  2:990061/1‑150                                                                                               ACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACATCAAGCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGA                                                                                                                                                        <  3:88029/141‑1                                                                                                                                                                                     ATCAAGCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATC                                                                           <  1:555379/132‑1                                                                                                                                                                                     ATCAAGCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGT                                                                                                                            <  1:473442/83‑1                                                                                                                                                                                     ATCAAGCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGT                                                                                                                            >  3:473463/1‑83                                                                                                                                                                                      TCAAGCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAATTGACAGAGTCGGCATCATCGAACCTGACGGGATCTGGAACGGTTCATAAATAAACGAACGCAC      <  4:680576/200‑1                                                                                                                                                                                      TCAAGCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAATTAAC                                                                 <  3:10751/141‑1                                                                                                                                                                                      TCAAGCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAATTAAC                                                                 <  3:658576/141‑1                                                                                                                                                                                      TCAAGCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAATTAAC                                                                 <  3:727759/141‑1                                                                                                                                                                                        cAGCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAATTAACAG                                                               <  3:489813/140‑1                                                                                                                                                                                         AGCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAATTAACAGAGTCGGCATC                                                     <  2:452407/150‑1                                                                                                                                                                                          GCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAATTAACAGAGTCGGCATCATCGAACCTGACGGGATCTGGAACGGTTCATAAATAAACGAACGCACAATC  >  4:713443/1‑200                                                                                                                                                                                          GCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAATTAACAGAGTCGGCATCATCGAACCTGACGGGATCTGGAACGGTTCATAAATAAACGAACGCACAATC  >  4:322933/1‑200                                                                                                                                                                                          GCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAATTAACAGAGTCGGCATCATCGAACCTGACGGGATCTGGAACGGTTCATAAATAAACGAACGCACAATC  >  4:154556/1‑200                                                                                                                                                                                          GCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAATTAACAGAGTCGGCATCATCGAACCTGACGGGATCTGGAAC                             <  4:308841/173‑1                                                                                                                                                                                          GCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAATTAACAGAGTCGGCATCA                                                    >  2:308826/1‑150                                                                                                                                                                                          GCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAATTAACAGAGTCGGCATCA                                                    >  2:655941/1‑150                                                                                                                                                                                          GCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAA                                                                      >  1:54678/1‑132                                                                                                                                                                                          GCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAA                                                                      >  1:651040/1‑132                                                                                                                                                                                          GCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAA                                                                      <  1:525355/132‑1                                                                                                                                                                                          GCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAA                                                                      >  1:406003/1‑132                                                                                                                                                                                                                                                                                                                                                                                                   TTCCAGATCCCGTCAGGTTCGATGATGCCGACTCTGTTAATTGGTGATTTTATTCTGGTAGAGAAGTTTGCTTATGGCATTAAAGATCCTATCTACCAGAAAACGCTGATCGAAACCGGTCATCCGAAACGCGGCGATATCGTGGTCTTTAAATATCCGGAAGATCCAAAGCTTGATTACATCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2705057‑2704871 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaagcTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCGTTTCGGATGACCGGTTTCGATCAGCGTTTTCTGGTAGATAGGATCTTTAATGCCATAAGCAAACTTCTCTACCAGAATAAAATCACCAATTAACAGAGTCGGCATCATCGAACCTGACGGGATCTGGAACGGTTCATAAATAAACGAACGCACAATC  >  NC_000913/2704888‑2705085

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.