New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4192747	103 (0.820)	3 (0.030)	3/282	12.6	3.0%	coding (91/201 nt)	thiS	immediate sulfur donor in thiazole formation
	?	NC_000913	= 4192865	98 (0.830)					coding (712/756 nt)	thiF	adenylyltransferase, modifies ThiS C‑terminus
Rejected: Position hash score below cutoff.

CGGATCGCCTCCACCATCAGTTGTGAAGAAGCGAATTTCCCTGTGCCGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4192544‑4192747 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgccAGTGGTTGCCCGGTATGCGGAGGAAGCAATGCAGATCCTGTTTAACGATCAAGCGATGCAGTGCGCCGCCGGGCAAACTGTTCACGAACTACTGGAGCAACTCGACCAACGACAAGCGGGCGCGGCTCTGGCGATTAATCAGCAAATCGTCCCGCGTGAGCAGTGGGCGCAACATATCGT  <  NC_000913/4192865‑4192686                                                                                                                                                                                                                                                                                                                                                                                                  CGGATCGCCTCCACCATCAGTTGTGAAGAAGCGAATTTCCCTGTGCCGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCG                                                                                                                                                                                          >  4:631324/1‑200      CGCCTCCACCATCAGTTGTGAAGAAGCGAATTTCCCTGTGCCGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCC                                                                                                                                                                                      <  4:969783/199‑1                                              CCGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGC                                                                                                                                                                                            >  4:922316/1‑153                                                 GTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGC                                                                                                                                                                                            <  2:922245/150‑1                                                   AAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCAAGAGCCG                                                                                                                                                                                          >  2:195599/1‑150                                                   AAACAGATGAGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCG                                                                                                                                                                                          <  2:414050/150‑1                                                                   AACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGC                                                                                                                                                                                            <  1:316086/132‑1                                                                   AACGTTTTGTCCGAAATACGTAACATTTCAACCCCCTGCAATAACCTGAAGAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGC                                                                                                                                                                                            <  1:719653/132‑1                                                                                                                                                    ATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCAGTGGTTGCCCGGTATGCGGAGGAAGCAATGCAGATCCTGTTTAACGATCAAGCGATGCAGTGCGCCGCCGGGCAAACTGTTCACGAACTACTGGAGCAACCCGACCAACGACAAGCGGGCGCGGCTCTGGCGATTAATCAGC                                       >  4:332031/1‑200                                                                                                                                                                  GCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCAGTGGTCGCCCGGTATGCGGAGGAAGCAATGCATATCCTGTTTAACGATCAAGCGATGCAGTGCGCCGCCGGGCAAACTGTTCACGAAC                                                                                             >  1:190905/1‑132                                                                                                                                                                                         TTAATCGCCAGAGCCGCGCCAGTGGTTGCCCGGTATGCGGAGGAAGCAATGCAGATCCTGTTTAACGATCAAGCGATGCAGTGCGCCGCCGGGCAAACTGTTCACGAACTACTGGAGCAACTCGACCAACGACAAGCGGGCGCGGCTCTGGCGATTAATCAGCAAATCGTCCCGCGTGAGCAGTGGGCGCAACATATCGT  >  4:962388/1‑200                                                                                                                                                                                                     GCCGCGCCAGTGGTTGCCCGGTATGCGGAGGAAGCAATGCAGATCCTGTTTAACGATCAAGCGATGCAGTGCGCCGCCGGGCAAACTGTTCACGAACTACTGGAGCAACTCGACCAACGACAAGCGGGCGCGGCTCTGGCG                                                 <  3:667386/141‑1                                                                                                                                                                                                         CGCCAGTGGTTGCCCGGTATGCGGAGGAAGCAATGCAGATCCTGTTTAACGATCAAGCGATGCAGTGCGCCGCCGGGCAAACTGTTCACGAACTACTGGAGCAACTCGACCAACGACAAGCGGGCGCGGCTCTGGCGATTCATCAGCAAA                                    >  2:108095/1‑150                                                                                                                                                                                                                                                                                                                                                                                                  CGGATCGCCTCCACCATCAGTTGTGAAGAAGCGAATTTCCCTGTGCCGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4192544‑4192747 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgccAGTGGTTGCCCGGTATGCGGAGGAAGCAATGCAGATCCTGTTTAACGATCAAGCGATGCAGTGCGCCGCCGGGCAAACTGTTCACGAACTACTGGAGCAACTCGACCAACGACAAGCGGGCGCGGCTCTGGCGATTAATCAGCAAATCGTCCCGCGTGAGCAGTGGGCGCAACATATCGT  <  NC_000913/4192865‑4192686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.