BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3529405	100 (0.800)	4 (0.030)	4/278	11.8	4.2%	coding (58/402 nt)	hslR	ribosome‑associated heat shock protein Hsp15
*	?	NC_000913	= 3529461	87 (0.750)	4 (0.030)	4/278	11.8	4.2%	coding (114/402 nt)	hslR	ribosome‑associated heat shock protein Hsp15
Rejected: Position hash score below cutoff.

Only 100 of 103 total aligned reads displayed.

CGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAGAGACTGCGGAAAGTGTAGAGAAACGCGAAAAAATGGCGCTGGCACGTAAACTT  >  NC_000913/3529262‑3529659

cGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTAc                                                                                                                                                                                                        <  4:388710/200‑1 (MQ=255)

cGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTAc                                                                                                                                                                                                        <  4:49080/200‑1 (MQ=255)

cGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATAACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTAc                                                                                                                                                                                                        <  4:897834/200‑1 (MQ=255)

       gCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGGAGGCGGTAAGGTGCATTACAACGGgc                                                                                                                                                                                                 <  4:1056691/200‑1 (MQ=255)

       gCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGgc                                                                                                                                                                                                 <  4:107264/200‑1 (MQ=255)

       gCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGgc                                                                                                                                                                                                 <  4:422649/200‑1 (MQ=255)

             aaaCAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGgcagcgcg                                                                                                                                                                                           <  4:526873/200‑2 (MQ=255)

                 aGTATCAACGCCATCCGTCACTGAAGGACGACAGCCGCCTGATCCCCTGGCTAAAGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAAGTTCGGCTGGATAAATGGCTATGGGCTGCACGTTTTTATAAAACCCGCGCGCTGGCCCGAGAAATGATTGAAGGCGGTAAAGTGCATTACAACGGgcagcccataga                                                                                                                                                                                       <  4:260214/200‑5 (MQ=255)

                       aaCGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGgcagcgcgcgggttttat                                                                                                                                                                                 <  4:891361/200‑12 (MQ=255)

                                       gAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACaa                                                                                                                                                                                                      <  4:746977/163‑1 (MQ=255)

                                          tGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAAt                                                                                                                                                              <  4:607746/200‑1 (MQ=255)

                                                  gccgccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTAc                                                                                                                                                                                                        <  2:900263/150‑1 (MQ=255)

                                                  gccgccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTAc                                                                                                                                                                                                        <  2:236587/150‑1 (MQ=255)

                                                     gccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAAc                                                                                                                                                                                                     >  2:1048805/1‑150 (MQ=255)

                                                      ccTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCAct                                                                                                                                                  >  4:409074/1‑200 (MQ=255)

                                                       cTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAGCCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTACATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCActc                                                                                                                                                 <  4:662947/200‑1 (MQ=255)

                                                       cTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCActc                                                                                                                                                 <  4:857315/200‑1 (MQ=255)

                                                           tCCCCTCGGTAATGTGAAGGGGACGCCGTGAAAGAGAAGCCGGCGGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTAc                                                                                                                                                                                                        <  3:133855/141‑1 (MQ=255)

                                                            ccccTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGCTCGACTGGATAAATGGCTATGGGCTTCCCGCTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGCAGGCGGTAAGGTACATTACACAGGGCAGTGCAGCAAGCCGAGCACCATCGTCGCGCTGAATTCACCGCTCACTCTgccc                                                                                                                                            >  4:1017903/1‑198 (MQ=255)

                                                              ccTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCa                                                                                                                                          >  4:396101/1‑200 (MQ=255)

                                                                    tAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTAc                                                                                                                                                                                                        <  1:677388/132‑1 (MQ=255)

                                                                     aaTGGGAGGGGGAGGCCAGGAAGGAGAAACTGGTGGTTGGGGTCGGACT‑GAAAAAAGGGTAAGGGGTGGCCGGTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACaa                                                                                                                                                                                                      <  1:80359/132‑1 (MQ=255)

                                                                      aTGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACaa                                                                                                                                                                                                      >  1:342687/1‑132 (MQ=255)

                                                                       tgtgAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGa                                                                                                                                 >  4:1000476/1‑200 (MQ=255)

                                                                       tgtgAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGa                                                                                                                                 >  4:379085/1‑200 (MQ=255)

                                                                        gtgAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGgcagcgca                                                                                                                                                                                           >  3:204459/1‑141 (MQ=255)

                                                                             ggAGACGCCATGAAAGAGAAACCTGTTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTACGGTGCACTACAACGGgcag                                                                                                                                                                                               >  1:732273/1‑132 (MQ=255)

                                                                             ggAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAg                                                                                                                                                                                      >  3:394675/1‑141 (MQ=255)

                                                                                    ccATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTg                                                                                                                    <  4:267596/200‑1 (MQ=255)

                                                                                     cATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGgcagcccatagccatttatcc                                                                                                                                                                              <  3:800055/141‑14 (MQ=255)

                                                                                     cATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCaa                                                                                                                                                                              <  3:257710/141‑1 (MQ=255)

                                                                                          aaGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTa                                                                                                              <  4:202207/200‑1 (MQ=255)

                                                                                              gaAACCTGCTGTGGAGGGTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAGCCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAgg                                                                                                          <  4:319012/200‑1 (MQ=255)

                                                                                                 aCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAAt                                                                                                                                                                           <  1:4351/132‑1 (MQ=255)

                                                                                                 aCCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAAt                                                                                                                                                                           <  1:280586/132‑1 (MQ=255)

                                                                                                  ccTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGAt                                                                                                      >  4:849145/1‑200 (MQ=255)

                                                                                                       tgTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTg                                                                                                 <  4:74451/200‑1 (MQ=255)

                                                                                                        gTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAACTCGTCGAg                                                                                                                                                                    >  1:663933/1‑132 (MQ=255)

                                                                                                        gTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGa                                                                                                >  4:1055048/1‑200 (MQ=255)

                                                                                                          tGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAAc                                                                                              <  4:49379/200‑1 (MQ=255)

                                                                                                          tGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAAc                                                                                              <  4:957921/200‑1 (MQ=255)

                                                                                                            aGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGa                                                                                                                                                                >  1:806623/1‑132 (MQ=255)

                                                                                                            aGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAg                                                                                            <  4:614294/200‑1 (MQ=255)

                                                                                                               ttCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGcc                                                                                                                                           <  2:624027/150‑1 (MQ=255)

                                                                                                                tCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGc                                                                                                                                                            <  1:547070/132‑1 (MQ=255)

                                                                                                                      ggATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAAtc                                                                                                                                                                          <  2:58704/112‑1 (MQ=255)

                                                                                                                      ggATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAAtc                                                                                                                                                                          >  4:58705/1‑112 (MQ=255)

                                                                                                                      ggATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCt                                                                                                                                                      >  1:663534/1‑132 (MQ=255)

                                                                                                                      ggATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTgcg                                                                                                                                             >  3:683768/1‑141 (MQ=255)

                                                                                                                      ggATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGaaa                                                                                                                                    >  2:881571/1‑150 (MQ=255)

                                                                                                                      ggATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCg                                                                                  >  4:829460/1‑200 (MQ=255)

                                                                                                                        aTAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGcc                                                                                                                                           <  3:160507/141‑1 (MQ=255)

                                                                                                                        aTAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGcc                                                                                >  4:41744/1‑200 (MQ=255)

                                                                                                                        aTAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGcc                                                                                >  4:1051794/1‑200 (MQ=255)

                                                                                                                             tGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTg                                                                                                                                               >  1:758468/1‑132 (MQ=255)

                                                                                                                              ggCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTgc                                                                                                                                              >  1:369002/1‑132 (MQ=255)

                                                                                                                               gCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACg                                                                                                                           >  2:888965/1‑150 (MQ=255)

                                                                                                                                    gggCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAACATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAgg                                                                                                                                        >  1:530366/1‑132 (MQ=255)

                                                                                                                                                 ttATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGAt                                                                                                                  <  3:732309/141‑1 (MQ=255)

                                                                                                                                                  tataAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGAtt                                                                                                                 >  3:348527/1‑141 (MQ=255)

                                                                                                                                                  tataAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGAtt                                                                                                                 >  3:657585/1‑141 (MQ=255)

                                                                                                                                                   ataAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAagag                                                     <  4:586300/200‑1 (MQ=255)

                                                                                                                                                     aaaaCCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAGCGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTa                                                                                                              <  3:240334/141‑1 (MQ=255)

                                                                                                                                                         nccGCGCGCTGNCNNGNGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAANGCGCTTACTg                                                                                                 >  2:230589/2‑150 (MQ=255)

                                                                                                                                                         cccGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGAAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAgg                                                                                                          <  3:813571/141‑1 (MQ=255)

                                                                                                                                                          ccGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGGGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGAt                                                                                                                  <  1:371794/132‑1 (MQ=255)

                                                                                                                                                            gcgcgcTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAAc                                                                                              <  2:1000401/150‑1 (MQ=255)

                                                                                                                                                            gcgcgcGGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAAc                                                                                              <  2:2714/150‑1 (MQ=255)

                                                                                                                                                              gcgcTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTa                                                                                                              <  1:738527/132‑1 (MQ=255)

                                                                                                                                                              gcgcTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAGAGACTGCGGAAAg                                          >  4:504213/1‑200 (MQ=255)

                                                                                                                                                                 cTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGt                                                                                         <  2:211657/150‑1 (MQ=255)

                                                                                                                                                                   ggCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCg                                                                                       >  2:441304/1‑150 (MQ=255)

                                                                                                                                                                     cccGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAAc                                                                                              <  3:733822/141‑1 (MQ=255)

                                                                                                                                                                     cccGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGCAAAGGCGa                                                                                                       >  1:560097/1‑132 (MQ=255)

                                                                                                                                                                      ccGTGAAATGATTGAAGGCGGTAAGGTGCATTACACCGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAGAGACTGCGGAAAGTGTAgaga                                  <  4:462797/200‑1 (MQ=255)

                                                                                                                                                                      ccGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAGAGACTGCGGAAAGTGTAgaga                                  <  4:261668/200‑1 (MQ=255)

                                                                                                                                                                      ccGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAGAGACTGCGGAAAGTGTAgaga                                  <  4:889035/200‑1 (MQ=255)

                                                                                                                                                                      ccGTGAAAGGATTGAGGGCGGTAAGGTGCATGACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGAGTACTGAACAGCGTCGCCCCGGCAGCGAGGCAGCCTTGCTGTATGAAGAGACTGCGGAAAGTGTAgaga                                  <  4:16865/200‑1 (MQ=255)

                                                                                                                                                                         tGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTAc                                                                                                   <  1:820022/132‑1 (MQ=255)

                                                                                                                                                                               gATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGccc                                                                                    <  3:464385/141‑1 (MQ=255)

                                                                                                                                                                               gATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGccc                                                                                    >  3:3589/1‑141 (MQ=255)

                                                                                                                                                                                aTTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGGGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGcccc                                                                                   >  3:500942/1‑141 (MQ=255)

                                                                                                                                                                                aTTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAGAGACTGCGGAAAGTGTAGAGAAACGCGaaaa                        >  4:438891/1‑200 (MQ=255)

                                                                                                                                                                                     aGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGc                                                                     >  2:463045/1‑150 (MQ=255)

                                                                                                                                                                                       gCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCATCg                                                                            >  3:167654/1‑141 (MQ=255)

                                                                                                                                                                                       gCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAGAGACTGCGGAAAGTGTAGAGAAACGCGAAAAAATGgcg                 >  4:818443/1‑200 (MQ=255)

                                                                                                                                                                                       gCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACGGAAAAGCGTCGcc                                                                                     >  1:109218/1‑132 (MQ=255)

                                                                                                                                                                                        cGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCtt                                                                  >  2:339561/1‑150 (MQ=255)

                                                                                                                                                                                               gTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTAt                                                           >  2:161611/1‑150 (MQ=255)

                                                                                                                                                                                               gTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAGAGACTGCGGAAAGTGTAGAGAAACGCGAAAAAATGGCGCTGGCACg         >  4:22251/1‑200 (MQ=255)

                                                                                                                                                                                               gTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCAACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTCTAAAGGCGAGTACTGAACAGCGCCCCCCCGCCAGc                                                                             >  1:233995/1‑132 (MQ=255)

                                                                                                                                                                                                 gCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCtt                                                                  >  3:633998/1‑141 (MQ=255)

                                                                                                                                                                                                    ttACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAaga                                                      >  2:348155/1‑150 (MQ=255)

                                                                                                                                                                                                     tACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAagag                                                     <  2:282726/150‑1 (MQ=255)

                                                                                                                                                                                                      aCAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGt                                                             >  3:842753/1‑141 (MQ=255)

                                                                                                                                                                                                      aCAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAgaga                                                    >  2:760466/1‑150 (MQ=255)

                                                                                                                                                                                                      aCAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAgaga                                                    >  2:988431/1‑150 (MQ=255)

                                                                                                                                                                                                      aCAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAGAGACTGCGGAAAGTGTAGAGAAACGCGAAAAAATGGCGCTGGCACGTAAACtt  >  4:744885/1‑200 (MQ=255)

                                                                                                                                                                                                      aCAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAGAGACTGCGGAAAGTGTAGAGAAACGCGAAAAAATGGCGCTGGCACGTAAACtt  <  4:957320/200‑1 (MQ=255)

                                                                                                                                                                                                      aCAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAGAGACTGCGGAAAGTGTAGAGAAACGCGAAAAAATGGCGCTGGCACGTAAACtt  >  4:1030772/1‑200 (MQ=255)

CGGGATTGCCGAGAAACAGTATCAACGCCATCCGTCACTGAATGACTACCGCCGCCTGATCCCCTCGCTAATGTGAAGGAGACGCCATGAAAGAGAAACCTGCTGTTGAGGTTCGACTGGATAAATGGCTATGGGCTGCCCGTTTTTATAAAACCCGCGCGCTGGCCCGTGAAATGATTGAAGGCGGTAAGGTGCATTACAACGGGCAGCGCAGCAAGCCGAGCAAAATCGTCGAGCTGAATGCCACGCTCACTCTGCGCCAGGGAAATGACGAACGCACGGTGATTGTAAAGGCGATTACTGAACAGCGTCGCCCCGCCAGCGAGGCAGCCTTGCTGTATGAAGAGACTGCGGAAAGTGTAGAGAAACGCGAAAAAATGGCGCTGGCACGTAAACTT  >  NC_000913/3529262‑3529659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.