Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_000913 | 3,608,682 | 0 | T→C | 14.4% | 14.3 ‑12.4 0.0 | 98 | intergenic (+33/+69) | zntA/tusA | zinc, cobalt and lead efflux system/mnm(5)‑s(2)U34‑tRNA 2‑thiolation sulfurtransferase |
Rejected: Polymorphism prediction not supported by minimum number of reads on both strands. | ||||||||||
Rejected: Prediction has biased read strand distribution supporting polymorphism. | ||||||||||
Reads supporting (aligned to +/- strand): new base (0/14): ref base (53/30): total (53/45) | ||||||||||
Fisher's exact test strand distribution p-value = 4.11e-06 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 |
TCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCA > NC_000913/3608484‑3608878 | tCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGAGTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑c < 4:335282/200‑1 (MQ=255) cGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑cccc > 4:144786/1‑200 (MQ=255) gCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCt < 4:122752/200‑1 (MQ=255) aGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTgggg < 4:587800/200‑1 (MQ=255) cATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGagag > 4:224068/1‑200 (MQ=255) cATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGagag > 4:55795/1‑200 (MQ=255) cACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGt > 4:1066196/1‑200 (MQ=255) cTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTa > 4:327023/1‑200 (MQ=255) cTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTa > 4:906784/1‑200 (MQ=255) ttGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGTGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGGG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAggg < 4:457050/200‑1 (MQ=255) ttGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAggg < 4:489610/200‑1 (MQ=255) ttGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAggg < 4:526953/200‑1 (MQ=255) tGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGt < 4:953624/200‑1 (MQ=255) aTCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATc > 4:555580/1‑200 (MQ=255) tCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑c < 2:709253/150‑1 (MQ=255) tCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑c < 2:292859/150‑1 (MQ=255) tCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGCTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGtn < 2:461757/150‑2 (MQ=255) ccgcGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCt < 2:689266/147‑1 (MQ=255) tCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGGGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATc < 4:93356/200‑1 (MQ=255) gCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCt > 4:250849/1‑200 (MQ=255) cTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTgggg > 2:324349/1‑150 (MQ=255) cTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGgag < 4:324371/152‑1 (MQ=255) cTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTa > 4:377841/1‑200 (MQ=255) cTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTa > 4:817615/1‑200 (MQ=255) gTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGcccc > 3:425236/1‑141 (MQ=255) gTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGcccc > 3:261169/1‑141 (MQ=255) gTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGcccc > 3:137047/1‑141 (MQ=255) gTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGgag < 2:700668/150‑1 (MQ=255) ggggATGCCGGGGTTGGGGCGGGCGGTGCTGGAGGAAACGGGGGCGAC‑GTTGCTGGTGACAGCGAAG‑GCTTAAAGTTTTTGGC‑GCAGGAGATAAGGA‑AAA‑CCAATGGCAACATTGAG‑CGCGACCGGC‑CCCCCCCCCCCTCTGGGGAGGGGGTTGGGGTGG‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAAc < 4:950252/199‑1 (MQ=255) ggggAGGACGGGGTGGGGGCGGGCAGTGCGGGCAGATACGGGGGGGAC‑GTTGCGGGTGACAGCGAGT‑GCGTTAAGTTTTTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGAAAAATTGGG‑CGGGATCGGC‑CCCCCCGCCCCTCGGGGGAGGGGGTTAGGGTGG‑GGGA‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAAc < 4:831844/199‑1 (MQ=255) aGGGAGGAGCGGGTGGGGGCTGGAGGTGGTGGAAGATA‑GGGGGCGGCGGGTGTTGGGAAAGGCAAAG‑GCGTTAAGTTTTTTGC‑GCGGGAGATAAGGA‑AAA‑CCGTTCGAAATATGGGC‑CGCGATCGTC‑CCCCCCGCCCCTCGGGGGAGAGGTTTAGGGGGG‑GGGA‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAAc < 4:1089081/200‑1 (MQ=255) ggATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTgg < 3:792087/141‑1 (MQ=255) aTGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTgggg < 3:843698/141‑1 (MQ=255) tGACGGGGTTGGGGGGGGCGGTGCTGGCAGATAGGGGGGGGGC‑GGGGCTGGTAAGGGCAATG‑GGGTTAAGA‑TGTTGCGGCAGGAGATAAGGC‑AAA‑CGGACCGCAAAATTGGG‑CGCGATCGGC‑CCCCTCCCCCTTCGGGGGAGGGGGTGGGGGGGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCt < 4:392382/200‑1 (MQ=255) aCCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGGTTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAggg < 2:644727/150‑1 (MQ=255) aCCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGgaga > 3:579902/1‑141 (MQ=255) aCCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGgaga > 3:286649/1‑141 (MQ=255) aCCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAggg < 2:55794/150‑1 (MQ=255) aCCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAggg < 2:850307/150‑1 (MQ=255) cGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTg < 2:372757/150‑1 (MQ=255) gggTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAggg > 3:313565/1‑141 (MQ=255) ggTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTgg > 1:546221/1‑132 (MQ=255) gtgGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGgag < 1:845300/132‑1 (MQ=255) gtgGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTGGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGgag < 1:786414/132‑1 (MQ=255) tggctggcAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAggg < 3:555183/141‑1 (MQ=255) gTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAggg < 1:656754/132‑1 (MQ=255) gggCAGATA‑GGGGGCCACGGGTGCGGGGGCAAGCAAAT‑GCTTTAAGTTTGTTG‑‑GGAGGGAAAAAGGC‑AAACCCGTTCGAAACTTGGGG‑CGCAACCGGC‑CCCCCCCCCCTTTGGGGGAGGGGTTTGGGGGGG‑GGGA‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGc < 4:482009/199‑1 (MQ=255) cAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑gggg < 1:51029/132‑1 (MQ=255) cAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGt > 4:344762/1‑200 (MQ=255) aTACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGCTCGGT‑ACCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑ACAAGTGGGCATCGAAGCCaa > 2:674489/1‑150 (MQ=255) cGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGCGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGa > 3:521790/1‑141 (MQ=255) ggggaCGAG‑GGGGCTGGTGACAGCGATG‑GCGTTAAGATTGTGGG‑GAAGAAGAGAAGGC‑AAA‑CCGACCGCAAAAGTGGG‑CGCGGTGGGC‑CCCTTCGCCCTTCTGGGGGGGGGGTGAGGGGGG‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCg < 4:404825/200‑1 (MQ=255) gggcgggTGCTGGGAACAG‑GAATGGGGTTAAGGTTGTTGC‑GCAGGAGAAAAGGC‑AAA‑CCGATGGCAACATTGGG‑CCCGATGGGC‑CCCCCGGCCCCTCTGGGGGGGGGGTTGGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGcccc < 2:321641/145‑1 (MQ=255) c‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTa > 4:46323/1‑200 (MQ=255) gTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAg > 1:793216/1‑132 (MQ=255) gTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAg > 1:325833/1‑132 (MQ=255) gTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGc > 3:548389/1‑141 (MQ=255) gTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGc > 4:512448/1‑200 (MQ=255) ggTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGcc > 2:926397/1‑150 (MQ=255) cAGCGAAT‑GAGTTAAGATTGTGGC‑GCAGGAAAAAAGGA‑AAA‑CAGATGGAAACATGGAG‑CGCAATGGGT‑CCCCGCGCCCCTGTGGGGAGAGGGTTGGGGGGG‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAAc < 3:325847/141‑1 (MQ=255) gCGAAT‑GCGTTAGGGTTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATGGCAACATTGGG‑CGCGATCGGC‑CCCCTCGCCCCTCTGGGGAGGGGGTTAGGGTGG‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCgtg < 4:672162/200‑1 (MQ=255) gCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGAAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGCGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTAACAACCGCCTTTACGAAACaat > 2:495712/1‑149 (MQ=255) cGTTACGATCGTTGC‑GCAGGAGATAAGGC‑AAA‑CCTATCGCAACATCGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGCGGGTTAGGGTGA‑GTGG‑AAAAGGCGGCATCGAAGCCAACCTGCCCCTATCAAc > 1:267217/1‑132 (MQ=37) cGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGTCATCGAAGCCAATCAGCCCCTATCAAc > 1:407044/1‑132 (MQ=255) cGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTAc > 3:96811/1‑141 (MQ=255) cGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACACTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGTCGGCATCGAAGCCAATCAGCCCCTATCAAc > 1:163897/1‑132 (MQ=255) ttAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGGGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCGTTACGa > 3:42725/1‑141 (MQ=255) aGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATc > 3:573350/1‑141 (MQ=255) aGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGt > 4:95940/1‑200 (MQ=255) gATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTa > 4:124319/1‑200 (MQ=255) ttgC‑GCAGGAGAAAGGCC‑AAA‑CGGATCGAACAATTAGG‑CGCGATGGGT‑CCCCTCGCCCCTTTGGGGAGAGGGTTAGGGGGG‑GGGA‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGc < 2:817548/150‑1 (MQ=255) ttc‑gcAGGAGAAAGGGA‑AAA‑CCGCCCGAAACATTGAG‑CGCGGTCGTC‑CCCCTCGCCCCTCGGGGGAGAGGGTAGGGGTAA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAAc < 4:607774/198‑1 (MQ=255) ggAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGAt > 3:654366/1‑138 (MQ=255) agaTAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGaa > 4:940173/1‑200 (MQ=255) agaTAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATaa > 1:725390/1‑132 (MQ=255) agaTAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGc > 3:35180/1‑141 (MQ=255) agaTAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAat > 4:520610/1‑200 (MQ=255) agaTAAGCC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCTCCTATGGGGAGATGGCTAGGGAGA‑GGGG‑AAAAGGCAGCATCGAAGCAAATCATCCCCTATCAACCGCCTTACCGAATCAAATAACTTTAAGGCAGCCCAtac > 2:436474/1‑148 (MQ=255) gaaaaGGA‑AAA‑CGGATCGAAACATTGAG‑CGCGTTCGGC‑CCCCCCCCCCCTCGGGGGAGAGGGTTGGGGGGG‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCg < 2:555516/147‑1 (MQ=255) gaTAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCg > 2:392119/1‑150 (MQ=255) aaaaaGGCAAAA‑CGGACCGAAACTTTGGG‑CGC‑ATTGGTCCCCCTCCCCCCTCGGGGGGGAGGGTTAGGGGGG‑GGGA‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGc < 3:621062/138‑1 (MQ=255) aTAGGGC‑AAA‑CGGATCGAAACATTGGG‑CGAGTTCGGC‑CCCCCCGCCCCTGGGGGGGGGGGGTGAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACg < 1:573329/132‑1 (MQ=255) gagggaaagccGACCGCAACATGGGG‑CACGATCAAC‑CCCCCCGCCCATCTGGGGAGAGGGTTGGGGTGG‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGtc < 2:224060/141‑1 (MQ=255) acgcaaaa‑CCGATGGAAACATTGCG‑CGCGCTCGGC‑CCCCCCCCCCTTCTGGGGAGAGGGTTAGGTGGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGAt < 1:654344/127‑1 (MQ=255) aGGC‑AAA‑CCATTCGAAAC‑TTGAGCCGAGATCGCC‑CCCCCCCCCCCTTGGGGGAGA‑GGTTAGGGGGG‑GGGGAAAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTcc < 3:601269/141‑1 (MQ=255) ggC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAACTAACGATaa > 1:32303/1‑132 (MQ=255) ggC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAgg > 4:18558/1‑178 (MQ=255) aaa‑CCGACCGCAACATTGGG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGA‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGc < 1:286637/132‑1 (MQ=255) aaacggagggaaaCAGTGGG‑CGCGATGGGG‑CCCCTCGCCCCTAGGGGGAGAGGGTTAGGGTGG‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGc < 1:459433/121‑1 (MQ=255) accgaggacAACATGGAG‑CGCGATGGGT‑CCCCGCGCCCCTCGGGGGGGAGGTTGAGGGGGG‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGc < 2:325188/142‑1 (MQ=255) tCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATc > 3:601258/1‑93 (MQ=255) tCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGc > 2:680434/1‑99 (MQ=255) tCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCa > 2:1067316/1‑150 (MQ=255) ncGCAACGTTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCTAATCAGCCACTATCAACCGCCTTTACGAATCAAATAACGATCGGGCAGTCCATCCGTCTCCATAGTAAcaa > 2:72/2‑148 (MQ=37) gCAACATTGAG‑CGCGATCGGT‑CCCCTCGCGCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAACGGCGGCGTCGAAGACAATCAGCCCCTACCAACCGCCCTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGAAACCAGt > 2:941687/1‑150 (MQ=38) g‑cgcGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGtt > 3:442865/1‑141 (MQ=255) tCGGT‑CCCCCCCCCCCTCTGGGGGGAGGGTTAGGGTGA‑GGGA‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAgg < 2:18557/150‑1 (MQ=255) cGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCa > 4:197847/1‑200 (MQ=255) gT‑CCCCTCGCCCCTCTGGGGTGAGGGCTAGGGTGT‑GGGG‑ACAAGGCGGCATCTAAGCCAATCACATCCTATCAACAGCCTTTACGAATCAAATAACGCTAAGGCCGTCAATCCGTCTCTCTAGCATCCAggt > 1:714037/1‑130 (MQ=25) | TCACGCCAATATCCGCCAGAACATCACTATTGCGCTGGGGCTGAAAGGGATCTTCCTCGTCACCACGCTGTTAGGGATGACCGGGTTGTGGCTGGCAGTGCTGGCAGATACGGGGGCGAC‑GGTGCTGGTGACAGCGAAT‑GCGTTAAGATTGTTGC‑GCAGGAGATAAGGC‑AAA‑CCGATCGCAACATTGAG‑CGCGATCGGT‑CCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGA‑GGGG‑AAAAGGCGGCATCGAAGCCAATCAGCCCCTATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTAGCAACCAGTTCGTGTTCCATAAAGGTACAAAACCCAGGAATATCGCGGGTAGTGGCCGGATCGTCGGCGATAATCA > NC_000913/3608484‑3608878 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |