New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1950954	87 (0.850)	3 (0.030)	3/292	12.4	3.4%	coding (123/567 nt)	yecD	isochorismatase family protein
	?	NC_000913	= 1950965	85 (0.870)					coding (134/567 nt)	yecD	isochorismatase family protein
Rejected: Position hash score below cutoff.

ATTTTGTTTTTTCAGGAGTCATTATGCTTGAACTTAATGCTAAAACCACTGCGCTGGTGGTGATCGATTTACAAGAAGGCATCTTACCTTTTGCCGGTGGTCCACATACTGCCGATGAGGTAGTTAATCGCGCCGGGAAGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1950809‑1950954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgCGAAATTTCGCCGCCAGCTTCCCGGCGCGATTAACTACCTCATCGGCAGTATGTGGACCACCGGCAAAAGGTAAGATGCCTTCTTGTAAATCGATCACCACCAGCGCAGTGGTTTTAGCATTAAGTTCAAGCATAATGAC  <  NC_000913/1950965‑1950826                                                                                                                                                                                                                                                                                                ATTTTGTTTTTTCAGGAGTCATTATGCTTGAACTTAATGCTAAAACCACTGCGCTGGTGGTGATCGATTTACAAGAAGGCATCTTACCTTTTGCCGGTGGTCCACATACTGCCGATGAGGTAGTTAATCGCGCCGGGAAGC                                                                                                                                                   >  1:176944/1‑141                   TCATTATGCTTGAACTTAATGCTAAAACCACTGCGCTGGTGGTGATCGATTTACAAGAAGGCATCTTACCTTTTGCCGGTGGTCCTCATACTGCCGATGAGGTAGTTAATCGCGCCGGGAAGCTGGCtccgt                                                                                                                                          >  2:110574/1‑127                                                                                                    GTCCACATACTGCCGTTGAGGTAGTTAATCGCGCCGGGAAGCTGGCGCGAAATTTCGCCGCCAGCTTCCCGGCGCGATTAACTACCTCATCGGCAGTATGTGGACCACCGGCAAAAGGTAAGATGCCTTCTTGTAAATCca                                                >  1:436827/1‑139                                                                                                               GCCGATGAGGTAGTTAATCGCGCCGGGAAGCTGGCGCGAAATTTCGCCGCCAGCTTCCCGGCGCGAGTAACTACCTCATCGGCAGTATGTGGACCACCGGCAAAAGGTAAGATGCCTTCTTGGAAATCGAgc                                              >  2:35584/1‑130                                                                                                                          AGTTAATCGCGCCGGGAAGCTGGCGCGAAATTTCGCCGCCAGCTTCCCGGCGCGATTAACTACCTCATCGGCAGTATGTGGACCACCGGCAAAAGGTAAGATGCCTTCTTGTAAATCGATCACCACCAGCGCAGTGGTTTTAGCATTAAG                 >  3:160808/1‑150                                                                                                                                                  GCGAAATTTCGCCGCCAGCTTCCCGGCGCGATTAACTACCTCATCGGCAGTATGTGGACCACCGGCAAAAGGTAAGATGCCTTCTTGTAAATCGATCACCACCAGCGCAGTGGTTTTAGCATTAAGTTCAAGCATAATGAC  <  1:526681/141‑1                                                                                                                                                                                                                                                                                                ATTTTGTTTTTTCAGGAGTCATTATGCTTGAACTTAATGCTAAAACCACTGCGCTGGTGGTGATCGATTTACAAGAAGGCATCTTACCTTTTGCCGGTGGTCCACATACTGCCGATGAGGTAGTTAATCGCGCCGGGAAGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1950809‑1950954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgCGAAATTTCGCCGCCAGCTTCCCGGCGCGATTAACTACCTCATCGGCAGTATGTGGACCACCGGCAAAAGGTAAGATGCCTTCTTGTAAATCGATCACCACCAGCGCAGTGGTTTTAGCATTAAGTTCAAGCATAATGAC  <  NC_000913/1950965‑1950826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.