| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3018119 = | 107 (1.040) | 3 (0.030) | 3/296 | 12.5 | 2.8% | coding (2060/3099 nt) | ygfK | putative Fe‑S subunit oxidoreductase subunit |
| ? | NC_000913 | 3018155 = | 108 (1.090) | coding (2096/3099 nt) | ygfK | putative Fe‑S subunit oxidoreductase subunit | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
AACGGAACTCTACGCCGTCGTGCAACGCTTCTTCATACTCTTCGCGCCATGCGGGCATCTCTTGTAGTGAACGACGGTAAACGATCGTTGCTTTTTCTACGCCTGGAACGCGTAACGCCGCACGAGCGCAGTCCATTGCGGTGTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3018265‑3018119‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttacGCGTTCCAGGCGTAGAAAAAGCAACGATCGTTTACCGTCGTTCACTACAAGAG > NC_000913/3018155‑3018207 AACGGCACTCTACGCCGTCGTGCAACGCTTCTTCATACTCTTCGCGCCATGCGCGCATCTCTTGTAGTGAACGACGGTAAACGATCGTTGCTTTTTCTACGCCTGGAACGCGTAACGCCGCACGAGCGCAGTCCATTGCGGTGTTACGCGTTCCAGGCGTAGAAAAAGCAACGATTGTTTACCGTCGTTCACTACAAGAG < 4:790760/200‑1AACGGAACTCTACGCCGTCGTGCAACGCTTCTTCATACTCTTCGCGCCATGCGGGCATCTCTTGTAGTGAACGACGGTAAACGATCGTTGCTTTTTCTACGCCTGGAACGCGTAACGCCGCACGAGCGCAGTCCATTGCGGTGTTACGCG < 3:206501/150‑1 GAACTCTACGCCGTCGTGCAACGCTTCTTCATACTCTTCGCGCCATGCGGGCATCTCTTGTAGTGAACGACGGTAAACGATCGTTGCTTTTTCTACGCCTGGAACGCGTAACGCCGCACGAGCGCAGTCCATTTCGGTGTT > 1:532864/1‑141 AACTCTACGCCGTCGTGCAACGCTTCTTCATACTCTTCGCGCCATGCGGGCATCTCTTGTAGTGAACGACGGTAAACGATCGTTGCTTTTTCT‑CGCCTGGAACGCGTAACGCCGCACGAGCGCAGTCCATTGCGGTGTTAC < 1:568323/141‑1 ACGCCGTCGTGCAACGCTTCTTCATACTCTTCGCGCCATGCGGGCATCTCTTGTAGTGAACGACGGTAAACGATCGTTGCTTTTTCTACGCCTGGAACGCGTAACGCCGCACGAGCGCAGTCCATTGCGGTG < 2:69919/132‑1 GGGCATCTCTTGTAGTGAACGACGGTAAACGATCGTTGCTTTTTCTACGCCTGGACCGCGTAACGCCGCACGAGCGCAGTCCATTGCGGTGTTACGCGTTCCAGGCGTAGAAAAAGCAACGATCGTTTACCG < 2:20896/132‑1 AACGGAACTCTACGCCGTCGTGCAACGCTTCTTCATACTCTTCGCGCCATGCGGGCATCTCTTGTAGTGAACGACGGTAAACGATCGTTGCTTTTTCTACGCCTGGAACGCGTAACGCCGCACGAGCGCAGTCCATTGCGGTGTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3018265‑3018119‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttacGCGTTCCAGGCGTAGAAAAAGCAACGATCGTTTACCGTCGTTCACTACAAGAG > NC_000913/3018155‑3018207 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |