New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4524799	109 (1.060)	3 (0.030)	3/286	12.2	3.2%	coding (212/906 nt)	yjhH	putative lyase/synthase
	?	NC_000913	= 4524824	81 (0.840)					coding (187/906 nt)	yjhH	putative lyase/synthase
Rejected: Position hash score below cutoff.

TCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4524595‑4524799 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcactcgccGAAGAAGCTGTAACCATTGTCGACGGGCGAGTGCCGGTATTGATTGGCGTCGGTTCCCCTTCCACTGACGAAGCGGTCAAACTGGCGCAGCATGCGCAAGCCTACGGCGCTGATGGTATCGTCGCCATCAACCCCTACTACTGGAAAGTCGCACCACGAAATCTTGACGACTATTACCAGCAGATCGCCCGTAGCG  <  NC_000913/4524824‑4524629                                                                                                                                                                                                                                                                                                                                                                                                                   TCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCAC                                                                                                                                                                                                           >  4:844124/1‑200                                               TCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCG                                                                                                                                                                                                               >  3:103198/1‑150                                                  GCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCA                                                                                                                                                                                                            >  3:753333/1‑150                                                     GGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTC                                                                                                                                                                                                         >  3:317105/1‑150                                                     GGTAATAGTCGTCAAGATTTCGTGGAGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTC                                                                                                                                                                                                         >  3:689494/1‑150                                                              CGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTC                                                                                                                                                                                                         >  1:613398/1‑141                                                                 CAAGATGTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCC                                                                                                                                                                                                      <  1:364560/141‑1                                                                     ATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCAC                                                                                                                                                                                                           >  1:482866/1‑132                                                                     ATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCAC                                                                                                                                                                                                           <  2:482844/132‑1                                                                                                                                AGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCGAAGAAGCTGTAACCATTGTCGACCGGCGAGTGCCGGTATGGATTGGGGTAGGTTCCCCTGCC                                                                                                                                       >  1:295457/1‑141                                                                                                                                   CTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACT                                                                                                                                                                                                          >  4:680275/1‑71                                                                                                                                   CTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACT                                                                                                                                                                                                          <  3:680231/71‑1                                                                                                                                     TGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCACTACCGGCACTCGCCGAAGAAGCTGTAACCGTTGTCGACGGGCGAGTGCCGGTATTGATTGTCGTCGGTTCCCCTTCCACTGA                                                                                                                                  >  1:110648/1‑141                                                                                                                                                                                             CAATACCGGCACTCGCCGAAGAAGCTGTAACCATTGTCGACGGGCGAGTGCCGGTATTGATTGGCGTCGGTTCCCCTTCCACTGACGAAGCGGTCAAACTGGCGCAGCATGCGCAAGCCTACGGCGCTGATGGTATCGTCGCCATCAACCCCTACTACTGGAAAGTCGCACCACGAAATCTTGACGACTATTACCAGCAG               >  4:150607/1‑200                                                                                                                                                                                                       ACTCGCCGAAGAAGCTGTAACCATTGTCGACGGGCGAGTGCCGGTATTGATTGGCGTCGGTTCCCCTTCCACTGACGAAGCGGTCAAACTGGCGCAGCATGCGCAAGCCTACGGCGCTGATGGTATCGTCGCCATCAACCC                                                                <  1:341282/141‑1                                                                                                                                                                                                          CGCCGAAGAAGCTGTAACCATTGTCGACGGGCGAGTGCCGGTATTGATTGGCGTCGGTTCCCCTTCCACTGACGAAGCGGTCAAACTGGCGCAGCATGCGCAAGCCTACGGCGCTGATGGTATCGTCGCCATCAACCCCTACTACTGGAAAGTCGCACCACGAAATCTTGACGACTATTACCAGCAGATCGCCCGTAGCG  <  4:37412/200‑1                                                                                                                                                                                                          CGCCGAAGAAGCTGTAACCATTGTCGACGGGCGAGTGCCGGTATTGATTGGCGTCGGTTCCCCTTCCACTGACGAAGCGGTCAAACTGGCGCAGCATGCGCAAGCCTACGGCGCTGATGGTATCGTCGCCATCAACCCCTACTACTGGAAAGTCGCACCACGAAATCTTGACGACTATTACCAGCAGATCGCCCGTAGCG  <  4:684326/200‑1                                                                                                                                                                                                          CGCCGAAGAAGCTGTAACCATTGTCGACGGGCGAGTGCCGGTATTGATTGGCGTCGGTTCCCCTTCCACTGACGAAGCGGTCAAACTGGCGCAGCATGCGCAAGCCTACGGCGCTGATGGTATCGTCGCCATCAACCCCTACTACTGGAA                                                    <  3:619648/150‑1                                                                                                                                                                                                          CGCCGAAGAAGCTGTAACCATTGTCGACGGGCGAGTGCCGGGATTGATTAGCGTCGGTTCCCCTTCCACTGACGAAGCGGTCAAACTGGCGCAGCATGCACAAGCCTACGGCGCTGATGGTATCGTCGCCATCAACCCCTACTACTGGAA                                                    <  3:143973/150‑1                                                                                                                                                                                                            CCGAAGAAGCTGTAACCATTGTCGACGGGCGAGTGCCGGTATTGATTGGCGTCGGTTCCCCTTCCACTGACGAAGCGGTCAAACTGGCGCAGCATGCGCAAGCCTACGGCGCTGATGGTATCGTCGCCATCAACCCCTACTACTGGAAAG                                                  <  3:572612/150‑1                                                                                                                                                                                                             CGAAGAAGCTGTAACCATTGTCGACGGGCGAGTGCCGGTATTGATTGGCGTCGGTTCCCCTTCCACTGACGAAGCGGTCAAACTGGCGCAGCATGCGCAAGCCTACGGCGCTGATGGTATCGTCGCCATCAACCCCTACTACTGGAAAGT                                                 <  3:247511/150‑1                                                                                                                                                                                                             CGAAGAAGCTGTAACCATTGTCGACGGGCGAGTGCCGGTATTGATTGGCGTCGGTTCCCCTTCCACTGACGAAGCGGTCAAACTGGCGCAGCATGCGCAAGCCTACGGCGCTGATGGTATCGTCGCCATCAACCCCTACTACTGGAAAGT                                                 <  3:241854/150‑1                                                                                                                                                                                                                                                                                                                                                                                                                   TCCGGAAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4524595‑4524799 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcactcgccGAAGAAGCTGTAACCATTGTCGACGGGCGAGTGCCGGTATTGATTGGCGTCGGTTCCCCTTCCACTGACGAAGCGGTCAAACTGGCGCAGCATGCGCAAGCCTACGGCGCTGATGGTATCGTCGCCATCAACCCCTACTACTGGAAAGTCGCACCACGAAATCTTGACGACTATTACCAGCAGATCGCCCGTAGCG  <  NC_000913/4524824‑4524629

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.