BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1071360 =	102 (0.990)	6 (0.060)	5/292	10.9	5.4%	coding (406/801 nt)	rutD	putative reactive intermediate detoxifying aminoacrylate hydrolase
*	?	NC_000913	1071403 =	111 (1.130)	6 (0.060)	5/292	10.9	5.4%	coding (363/801 nt)	rutD	putative reactive intermediate detoxifying aminoacrylate hydrolase
Rejected: Position hash score below cutoff.

Only 100 of 105 total aligned reads displayed.

AGCGGATGCGATCCGCATGGTGACTAAAGTCAGCGCGTTTGAGGGCGTTAAGTCGACGCAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCACCGAGCGCATGGCCGACCACTGCGTAATGCTCAATCCCTGCGGCTACCAGCG  >  NC_000913/1071171‑1071548

aGCGGATGCGATCCGCATGGTGACTAAAGTCAGCGCGTTTGAGGGCGTTAAGTCGACGCAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATAc                                                                                                                                                                                    <  4:236068/200‑1 (MQ=255)

aGCGGATGCGATCCGCATGGTGACTAAAGTCAGCGCGTTTGAGGGCGTTAAGTCGACGCAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATAc                                                                                                                                                                                    <  4:688330/200‑1 (MQ=255)

     aTGCGATCCGCATGGTGACTAAAGTCAGCGCGTTTGAGGGCGTTAAGTCGACGCAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTaa                                                                                                                                                                               >  4:602205/1‑200 (MQ=255)

     aTGCGATCCGCATGGTGACTAAAGTCAGCGCGTTTGAGGGCGTTAAGTCGACGCAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTaa                                                                                                                                                                               <  4:48777/200‑1 (MQ=255)

                         aaaGTCAGCGCGTTTGAGGGCGTTAAGTCGACGCAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAAc                                                                                                                                                           <  4:434015/200‑1 (MQ=255)

                                    gTTTGAGGGCGTTAAGTCGACGCAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTa                                                                                                                                                >  4:745780/1‑200 (MQ=255)

                                     tttGAGGGCGTTAAGTCGACGCAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTAt                                                                                                                                               >  4:56850/1‑200 (MQ=255)

                                        gAGGGCGTTAAGTCGACGCAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATggg                                                                                                                                            <  4:161467/200‑1 (MQ=255)

                                          gggCGTTAAGTCGACGCAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCg                                                                                                                                          <  4:256606/200‑1 (MQ=255)

                                                  aGTCGACGCAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATAc                                                                                                                                                                                    <  3:51390/150‑1 (MQ=255)

                                                     cGACGCAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGt                                                                                                                                                                                 <  3:275328/150‑1 (MQ=255)

                                                          cAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgcc                                                                                                                                                                                              >  2:378991/1‑132 (MQ=255)

                                                          cAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtata                                                                                                                                                                                     >  1:382525/1‑141 (MQ=255)

                                                          cAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtata                                                                                                                                                                                     >  1:703791/1‑141 (MQ=255)

                                                          cAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCtata                                                                                                                                                                                     >  1:622470/1‑141 (MQ=255)

                                                          cAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTagccagc                                                                                                                          >  4:131289/1‑200 (MQ=255)

                                                           aGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATAc                                                                                                                                                                                    <  1:388643/141‑1 (MQ=255)

                                                             tAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAg                                                                                                                                                                                  <  1:359381/141‑1 (MQ=255)

                                                                attattTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTaa                                                                                                                                                                               <  1:476409/141‑1 (MQ=255)

                                                                attattTTTGCCCTGAAAATGCGCCAGGGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTaa                                                                                                                                                                               <  1:698648/141‑1 (MQ=255)

                                                                   attTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGc                                                                                                                 <  4:649826/200‑1 (MQ=255)

                                                                    ggttggCCCTGAAAATGCGGCAGTGCGAGGGCGTCTTCTGGCTCCAGGCGAGGTGGGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATAc                                                                                                                                                                                    <  2:370683/127‑1 (MQ=255)

                                                                           ccTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCGCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAAc                                                                                                                                                           <  3:483305/150‑1 (MQ=255)

                                                                            cTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCGGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGca                                                                                                        >  4:300146/1‑200 (MQ=255)

                                                                              gAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGtt                                                                                                                                                                          <  2:137327/132‑1 (MQ=255)

                                                                              gAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGtt                                                                                                                                                                          <  2:275372/132‑1 (MQ=255)

                                                                                  aTGCGCCAGGGCCCGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAgcggcg                                                                                                                                                    <  3:29851/150‑1 (MQ=255)

                                                                                     cgcCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCg                                                                                               <  4:464061/200‑1 (MQ=255)

                                                                                         aGTGCCCGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAgcgg                                                                                                                                                      <  1:241022/141‑1 (MQ=255)

                                                                                          gggCCAGCGCGTCGTCTGCCTCCAGGCGAGGGGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATggg                                                                                                                                            <  3:457145/148‑1 (MQ=255)

                                                                                          gTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATAc                                                                                                                                                                                    >  4:631798/1‑110 (MQ=255)

                                                                                          gTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATAc                                                                                                                                                                                    <  3:631754/110‑1 (MQ=255)

                                                                                          gTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGaa                                                                                                                                                              >  2:321613/1‑132 (MQ=255)

                                                                                          gTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATggg                                                                                                                                            >  3:655784/1‑150 (MQ=255)

                                                                                           ggCCAGCGCGTCTTCTACCTCCAGGCGAGGTGCACGGGCCGCCATCCAGTCGGCGAGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGaaa                                                                                                                                                             <  2:129082/131‑1 (MQ=255)

                                                                                            gcaaGCGCGTCTTCTGCCTCCAGGAGAGGTGCGCGAGCCGCCATCAAGTCGGCGGGTTAGAGGAACAACGGCGGCGCTTCCACCCATGCATGCGCGCCGCCGCTATACAGTAATCGTGCGCGAACCTGAAAACAGCGGCGCGTATGGGCg                                                                                                                                          <  3:712570/147‑1 (MQ=255)

                                                                                            gCCAGCGCATCTTCTGCATGCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCg                                                                                                                                          <  3:284175/150‑1 (MQ=255)

                                                                                              cAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGAt                                                                                      <  4:785655/200‑1 (MQ=255)

                                                                                                 cgcgTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATg                                                                                                                                              >  1:91141/1‑141 (MQ=255)

                                                                                                 cgcgTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAAt                                                                                   >  4:578607/1‑200 (MQ=255)

                                                                                                   cgTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATcc                                                                                 <  4:639359/200‑1 (MQ=255)

                                                                                                   cgTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATcc                                                                                 <  4:602193/200‑1 (MQ=255)

                                                                                                     tcttctGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCTTATGGGCg                                                                                                                                          >  1:426989/1‑141 (MQ=255)

                                                                                                        tctGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGttt                                                                                                                                       >  1:306874/1‑141 (MQ=255)

                                                                                                           gCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTagccag                                                                                                                           >  3:155130/1‑150 (MQ=255)

                                                                                                            ccTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATggg                                                                                                                                            <  2:288645/132‑1 (MQ=255)

                                                                                                             cTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTACTCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGc                                                                                                                                           >  2:444604/1‑132 (MQ=255)

                                                                                                             cTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGc                                                                                                                                           <  2:429687/132‑1 (MQ=255)

                                                                                                             cTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCt                                                                       >  4:695802/1‑200 (MQ=255)

                                                                                                                  ggCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTa                                                                                                                                      >  2:461791/1‑132 (MQ=255)

                                                                                                                        gTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGt                                                                                                                       >  1:565938/1‑141 (MQ=255)

                                                                                                                           cgcgGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTagcc                                                                                                                             <  2:382508/132‑1 (MQ=255)

                                                                                                                           cgcgGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAgc                                                         <  4:856975/200‑1 (MQ=255)

                                                                                                                               ggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTCGCCAGCCGTTAACGCTGATCAGcac                                                                                                       >  3:463294/1‑150 (MQ=255)

                                                                                                                               ggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGcac                                                                                                       <  3:316570/150‑1 (MQ=255)

                                                                                                                               ggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCAc                                                     <  4:39203/200‑1 (MQ=255)

                                                                                                                               ggCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCAc                                                     <  4:655828/200‑1 (MQ=255)

                                                                                                                                   gccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATc                                                                                                            <  1:82753/141‑1 (MQ=255)

                                                                                                                                    ccATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCa                                                                                                           >  1:573802/1‑141 (MQ=255)

                                                                                                                                     cATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTAc                                                                                                 <  3:372573/150‑1 (MQ=255)

                                                                                                                                           gTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCACCGAGCGCATGGc                                         <  4:349613/200‑1 (MQ=255)

                                                                                                                                            tCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATc                                                                                                            <  2:87925/132‑1 (MQ=255)

                                                                                                                                              ggcggTATAGAGGAACCACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTAc                                                                                                 <  1:366577/141‑1 (MQ=255)

                                                                                                                                              ggcggGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTAc                                                                                                 <  1:325092/141‑1 (MQ=255)

                                                                                                                                                  ggATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGAc                                                                                             >  1:513674/1‑141 (MQ=255)

                                                                                                                                                  ggATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGAc                                                                                             >  1:375821/1‑141 (MQ=255)

                                                                                                                                                  ggATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCACCGAGCGCATGGCCGACCAc                                  >  4:202676/1‑200 (MQ=255)

                                                                                                                                                   gATAGAGGAACAACGGCTGCGCTGCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAAt                                                                                   <  3:18478/150‑1 (MQ=255)

                                                                                                                                                     tAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATcc                                                                                 <  3:405310/150‑1 (MQ=255)

                                                                                                                                                         ggAACAACGGCTGCGCTTCCACGCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGAt                                                                                      <  1:5936/141‑1 (MQ=255)

                                                                                                                                                         ggAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGAt                                                                                      <  1:671733/141‑1 (MQ=255)

                                                                                                                                                          gAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGTGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCACCGAGCGCATGGCCGACCACCGCGTAAt                          >  4:45584/1‑200 (MQ=255)

                                                                                                                                                          gAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATa                                                                                     <  1:585974/141‑1 (MQ=255)

                                                                                                                                                          gAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCACCGAGCGCATGGCCGACCACTGCGTAAt                          >  4:68447/1‑200 (MQ=255)

                                                                                                                                                           aacaacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATggg                                                                                                                                            >  3:45155/1‑85 (MQ=255)

                                                                                                                                                           aacaacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGcc                                                                           >  3:386946/1‑150 (MQ=255)

                                                                                                                                                            acaacGGCTGCGCTTCCCCCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCACCGAGCGCATGGCCGACCACTGCGTAATGc                        <  4:593727/200‑1 (MQ=255)

                                                                                                                                                            acaacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCACCGAGCGCATGGCCGACCACTGCGTAATGc                        <  4:149885/200‑1 (MQ=255)

                                                                                                                                                              aacGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATcc                                                                                 <  1:432158/141‑1 (MQ=255)

                                                                                                                                                               acGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCt                                                                       <  3:310570/150‑1 (MQ=255)

                                                                                                                                                                       gcTTCCAGCGATGACTGCGGGGCGCCGCTAGACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTGTAGTCGTAGCCAGCCGTTAACGCTGATCAGCACAGGTACCGACGCGGGATAATcc                                                                                 <  2:523284/132‑1 (MQ=255)

                                                                                                                                                                       gcTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTGATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATcc                                                                                 <  2:369298/132‑1 (MQ=255)

                                                                                                                                                                        cTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTACCGCTGATCAGCCCAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCcca                                                              >  3:727432/1‑150 (MQ=255)

                                                                                                                                                                        cTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGCATGGGCGTTTACTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCCCCGCCAGCTGCATTcccc                                                              >  3:750759/1‑149 (MQ=255)

                                                                                                                                                                        cTTCCACCCATGCCTGCGCGCCGCCCCTATACAGTAATCGTTCGCGTACCTGATAACACCGCCGCGCATGGACGTTTATTCGTAGCCAGCCGTTAACGCTGGTCAGCACACTGACCTACGCGGGACACTCCAGCCCCTGCAGCAATCcca                                                              >  3:490893/1‑150 (MQ=255)

                                                                                                                                                                         ttCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCACCGAGCGCATGGCCGACCACTGCGTAATGCTCAATCCCTGCgg           <  4:465988/200‑1 (MQ=255)

                                                                                                                                                                          gccACCCGTGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCccacc                                                            <  3:745734/149‑1 (MQ=255)

                                                                                                                                                                            cACCCATGCCTGCGCGTCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAg                                                          <  3:637253/150‑1 (MQ=255)

                                                                                                                                                                             aCCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCAtt                                                                  >  1:471302/1‑141 (MQ=255)

                                                                                                                                                                             aCCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAgc                                                         >  3:395620/1‑150 (MQ=255)

                                                                                                                                                                              cccATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTc                                                                 >  1:159669/1‑141 (MQ=255)

                                                                                                                                                                              cccATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCACCGAGCGCATGGCCGACCACTGCGTAATGCTCAATCCCTGCGGCTAcc      >  4:175242/1‑200 (MQ=255)

                                                                                                                                                                                  tGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATACTCCAGCGCCAGCTGCATTCCCACCAGCGCAcc                                                    >  3:482324/1‑150 (MQ=255)

                                                                                                                                                                                  tGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCAcc                                                    >  3:592491/1‑150 (MQ=255)

                                                                                                                                                                                  tGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCACCGAGCGCATGGCCGACCACTGCGTAAGGCTCAATCCCTGCGGCTACCAgcg  >  4:458801/1‑200 (MQ=255)

                                                                                                                                                                                     cccatacgcgccgcTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGcac                                                                                                       <  3:179914/88‑1 (MQ=255)

                                                                                                                                                                                     cccatacgcgccgcTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGcac                                                                                                       >  4:179919/9‑96 (MQ=255)

                                                                                                                                                                                     cccatacgcgccgcTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCACCGAg                                                 >  3:216812/9‑150 (MQ=255)

                                                                                                                                                                                          cgccgccgcTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCAc                                                     <  1:704339/141‑1 (MQ=255)

                                                                                                                                                                                          cgccgccgcTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCAc                                                     <  1:502491/141‑1 (MQ=255)

AGCGGATGCGATCCGCATGGTGACTAAAGTCAGCGCGTTTGAGGGCGTTAAGTCGACGCAGTAAATTATTTTTGCCCTGAAAATGCGCCAGTGCCAGCGCGTCTTCTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGCTATACAGTAATCGTTCGCGAACCTGAAAACAGCGGCGCGTATGGGCGTTTATTCGTAGCCAGCCGTTAACGCTGATCAGCACAGTTACCGACGCGGGATAATCCAGCGCCAGCTGCATTCCCACCAGCGCACCGAGCGCATGGCCGACCACTGCGTAATGCTCAATCCCTGCGGCTACCAGCG  >  NC_000913/1071171‑1071548

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.